RNA–Protein interactions for RNA: ENST00000377561.6

CNTNAP3B-203, Transcript of contactin associated protein like 3B, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 5,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-203ENST00000377561 ATOH1Q92858 354 aaPredicted RBP17.04■□□□□ 0.32
CNTNAP3B-203ENST00000377561 SERGEFQ9UGK8 458 aa17.04■□□□□ 0.32
CNTNAP3B-203ENST00000377561 IFITM5A6NNB3 132 aa17.03■□□□□ 0.32
CNTNAP3B-203ENST00000377561 ZNF814B7Z6K7 855 aa17.03■□□□□ 0.32
CNTNAP3B-203ENST00000377561 SNAPINO95295 136 aa17.03■□□□□ 0.32
CNTNAP3B-203ENST00000377561 SNRNP70P08621 437 aaKnown RBP17.03■□□□□ 0.32
CNTNAP3B-203ENST00000377561 PLA2G7Q13093 441 aa17.03■□□□□ 0.32
CNTNAP3B-203ENST00000377561 CST9LP1Q5W188 147 aa17.03■□□□□ 0.32
CNTNAP3B-203ENST00000377561 ZNF813Q6ZN06 617 aa17.03■□□□□ 0.32
CNTNAP3B-203ENST00000377561 SYT9Q86SS6 491 aa17.03■□□□□ 0.32
CNTNAP3B-203ENST00000377561 LINC01555Q8NAE3 123 aa17.03■□□□□ 0.32
CNTNAP3B-203ENST00000377561 GPR32P1Q8NGA4 272 aa17.03■□□□□ 0.32
CNTNAP3B-203ENST00000377561 GPATCH2Q9NW75 528 aa17.03■□□□□ 0.32
CNTNAP3B-203ENST00000377561 KCND3Q9UK17 655 aa17.03■□□□□ 0.32
CNTNAP3B-203ENST00000377561 PMP2P02689 132 aa17.03■□□□□ 0.32
CNTNAP3B-203ENST00000377561 ACSM1Q08AH1 577 aa17.03■□□□□ 0.32
CNTNAP3B-203ENST00000377561 C9orf50Q5SZB4 431 aa17.03■□□□□ 0.32
CNTNAP3B-203ENST00000377561 S1PR5Q9H228 398 aa17.03■□□□□ 0.32
CNTNAP3B-203ENST00000377561 PRAMEF4O60810 478 aa17.03■□□□□ 0.32
CNTNAP3B-203ENST00000377561 MED6O75586 246 aa17.03■□□□□ 0.32
CNTNAP3B-203ENST00000377561 ANXA7P20073 488 aaKnown RBP17.03■□□□□ 0.32
CNTNAP3B-203ENST00000377561 THBS3P49746 956 aa17.03■□□□□ 0.32
CNTNAP3B-203ENST00000377561 GFERP55789 205 aa17.03■□□□□ 0.32
CNTNAP3B-203ENST00000377561 CDK5Q00535 292 aa17.03■□□□□ 0.32
CNTNAP3B-203ENST00000377561 BATFQ16520 125 aa17.03■□□□□ 0.32
CNTNAP3B-203ENST00000377561 CCDC190Q86UF4 302 aa17.03■□□□□ 0.32
CNTNAP3B-203ENST00000377561 ANKRD9Q96BM1 317 aaPredicted RBP17.03■□□□□ 0.32
CNTNAP3B-203ENST00000377561 TMEM200CA6NKL6 621 aa17.03■□□□□ 0.32
CNTNAP3B-203ENST00000377561 KRBOX1C9JBD0 128 aa17.03■□□□□ 0.32
CNTNAP3B-203ENST00000377561 ZNF587BE7ETH6 402 aa17.03■□□□□ 0.32
CNTNAP3B-203ENST00000377561 C17orf112F2Z3M2 114 aa17.03■□□□□ 0.32
CNTNAP3B-203ENST00000377561 HOXA1P49639 335 aaPredicted RBP17.03■□□□□ 0.32
CNTNAP3B-203ENST00000377561 TMEM71Q6P5X7 295 aa17.03■□□□□ 0.32
CNTNAP3B-203ENST00000377561 SECTM1Q8WVN6 248 aa17.03■□□□□ 0.32
CNTNAP3B-203ENST00000377561 OR2A14Q96R47 310 aa17.03■□□□□ 0.32
CNTNAP3B-203ENST00000377561 DOK1Q99704 481 aa17.03■□□□□ 0.32
CNTNAP3B-203ENST00000377561 SAMD10Q9BYL1 202 aa17.03■□□□□ 0.32
CNTNAP3B-203ENST00000377561 PRSS37A4D1T9 235 aa17.02■□□□□ 0.32
CNTNAP3B-203ENST00000377561 VAMP5O95183 116 aa17.02■□□□□ 0.32
CNTNAP3B-203ENST00000377561 EDN3P14138 238 aa17.02■□□□□ 0.32
CNTNAP3B-203ENST00000377561 TDHQ8IZJ6 230 aa17.02■□□□□ 0.32
CNTNAP3B-203ENST00000377561 MAML2Q8IZL2 1156 aaPredicted RBP17.02■□□□□ 0.32
CNTNAP3B-203ENST00000377561 OR11A1Q9GZK7 315 aa17.02■□□□□ 0.32
CNTNAP3B-203ENST00000377561 KLRC4-KLRK1H3BQV0 150 aa17.02■□□□□ 0.32
CNTNAP3B-203ENST00000377561 EIF4EBP2Q13542 120 aaPredicted RBP17.02■□□□□ 0.32
CNTNAP3B-203ENST00000377561 LPCAT3Q6P1A2 487 aa17.02■□□□□ 0.32
CNTNAP3B-203ENST00000377561 MDGA2Q7Z553 956 aa17.02■□□□□ 0.32
CNTNAP3B-203ENST00000377561 ZNF547Q8IVP9 402 aa17.02■□□□□ 0.32
CNTNAP3B-203ENST00000377561 SLAMF6Q96DU3 332 aa17.02■□□□□ 0.32
CNTNAP3B-203ENST00000377561 TXNIPQ9H3M7 391 aa17.02■□□□□ 0.32
CNTNAP3B-203ENST00000377561 ZNF355PQ9NSJ1 428 aa17.02■□□□□ 0.32
CNTNAP3B-203ENST00000377561 A0A0B4J2A0 478 aa17.02■□□□□ 0.32
CNTNAP3B-203ENST00000377561 LILRA5A6NI73 299 aa17.02■□□□□ 0.32
CNTNAP3B-203ENST00000377561 SLC2A1P11166 492 aa17.02■□□□□ 0.32
CNTNAP3B-203ENST00000377561 DBPQ10586 325 aaPredicted RBP17.02■□□□□ 0.32
CNTNAP3B-203ENST00000377561 CAMK2BQ13554 666 aa17.02■□□□□ 0.32
CNTNAP3B-203ENST00000377561 KCNIP4Q6PIL6 250 aa17.02■□□□□ 0.32
CNTNAP3B-203ENST00000377561 WDR5BQ86VZ2 330 aa17.02■□□□□ 0.32
CNTNAP3B-203ENST00000377561 PIGTQ969N2 578 aa17.02■□□□□ 0.32
CNTNAP3B-203ENST00000377561 POFUT1Q9H488 388 aa17.02■□□□□ 0.32
CNTNAP3B-203ENST00000377561 MOB1AQ9H8S9 216 aa17.02■□□□□ 0.32
CNTNAP3B-203ENST00000377561 SHPKQ9UHJ6 478 aa17.02■□□□□ 0.32
CNTNAP3B-203ENST00000377561 ZNF133P52736 654 aaPredicted RBP17.02■□□□□ 0.31
CNTNAP3B-203ENST00000377561 SMAD4Q13485 552 aaKnown RBP17.02■□□□□ 0.31
CNTNAP3B-203ENST00000377561 KMT5CQ86Y97 462 aa17.02■□□□□ 0.31
CNTNAP3B-203ENST00000377561 NAXDQ8IW45 347 aa17.02■□□□□ 0.31
CNTNAP3B-203ENST00000377561 UHRF2Q96PU4 802 aa17.02■□□□□ 0.31
CNTNAP3B-203ENST00000377561 ATF6BQ99941 703 aa17.02■□□□□ 0.31
CNTNAP3B-203ENST00000377561 PIGLQ9Y2B2 252 aa17.02■□□□□ 0.31
CNTNAP3B-203ENST00000377561 hCG_1809904A0A1W2PP81 198 aa17.02■□□□□ 0.31
CNTNAP3B-203ENST00000377561 A0A1W2PPE2 198 aa17.02■□□□□ 0.31
CNTNAP3B-203ENST00000377561 A0A1W2PR64 198 aa17.02■□□□□ 0.31
CNTNAP3B-203ENST00000377561 A0A1W2PRV1 198 aa17.02■□□□□ 0.31
CNTNAP3B-203ENST00000377561 ZNF728P0DKX0 622 aa17.02■□□□□ 0.31
CNTNAP3B-203ENST00000377561 ECI1P42126 302 aa17.02■□□□□ 0.31
CNTNAP3B-203ENST00000377561 CLDN20P56880 219 aa17.02■□□□□ 0.31
CNTNAP3B-203ENST00000377561 TMEM81Q6P7N7 255 aa17.02■□□□□ 0.31
CNTNAP3B-203ENST00000377561 CMTM4Q8IZR5 234 aa17.02■□□□□ 0.31
CNTNAP3B-203ENST00000377561 OR10K1Q8NGX5 313 aa17.02■□□□□ 0.31
CNTNAP3B-203ENST00000377561 OR4Q3Q8NH05 313 aa17.02■□□□□ 0.31
CNTNAP3B-203ENST00000377561 DUSP13Q9UII6 198 aa17.02■□□□□ 0.31
CNTNAP3B-203ENST00000377561 F5P12259 2224 aa17.01■□□□□ 0.31
CNTNAP3B-203ENST00000377561 FITM1A5D6W6 292 aa17.01■□□□□ 0.31
CNTNAP3B-203ENST00000377561 AGAP14A8MT82 685 aa17.01■□□□□ 0.31
CNTNAP3B-203ENST00000377561 GIPP09681 153 aaPredicted RBP17.01■□□□□ 0.31
CNTNAP3B-203ENST00000377561 CYB561P49447 251 aa17.01■□□□□ 0.31
CNTNAP3B-203ENST00000377561 BAK1Q16611 211 aa17.01■□□□□ 0.31
CNTNAP3B-203ENST00000377561 C1orf53Q5VUE5 145 aa17.01■□□□□ 0.31
CNTNAP3B-203ENST00000377561 RNLSQ5VYX0 342 aa17.01■□□□□ 0.31
CNTNAP3B-203ENST00000377561 SIRT6Q8N6T7 355 aa17.01■□□□□ 0.31
CNTNAP3B-203ENST00000377561 AMER3Q8N944 861 aa17.01■□□□□ 0.31
CNTNAP3B-203ENST00000377561 OR1M1Q8NGA1 313 aa17.01■□□□□ 0.31
CNTNAP3B-203ENST00000377561 OR5M1Q8NGP8 315 aa17.01■□□□□ 0.31
CNTNAP3B-203ENST00000377561 OR4A16Q8NH70 328 aa17.01■□□□□ 0.31
CNTNAP3B-203ENST00000377561 CPNE4Q96A23 557 aaPredicted RBP17.01■□□□□ 0.31
CNTNAP3B-203ENST00000377561 ZNF707Q96C28 371 aaPredicted RBP17.01■□□□□ 0.31
CNTNAP3B-203ENST00000377561 UBE2ZQ9H832 354 aaPredicted RBP17.01■□□□□ 0.31
CNTNAP3B-203ENST00000377561 GABRG2P18507 467 aa17.01■□□□□ 0.31
CNTNAP3B-203ENST00000377561 SVBPQ8N300 66 aa17.01■□□□□ 0.31
CNTNAP3B-203ENST00000377561 TUSC2O75896 110 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms