RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 PTGESO14684 152 aa11.46□□□□□ -0.57
VPS13A-204ENST00000376634 ARPC3O15145 178 aa11.46□□□□□ -0.57
VPS13A-204ENST00000376634 SULT1C4O75897 302 aa11.46□□□□□ -0.57
VPS13A-204ENST00000376634 GOT1L1Q8NHS2 421 aaPredicted RBP11.46□□□□□ -0.57
VPS13A-204ENST00000376634 AKR1E2Q96JD6 320 aa11.46□□□□□ -0.57
VPS13A-204ENST00000376634 SPACA1Q9HBV2 294 aa11.46□□□□□ -0.57
VPS13A-204ENST00000376634 FBXO8Q9NRD0 319 aa11.46□□□□□ -0.57
VPS13A-204ENST00000376634 LANCL2Q9NS86 450 aa11.46□□□□□ -0.57
VPS13A-204ENST00000376634 UGT2A1Q9Y4X1 527 aa11.46□□□□□ -0.57
VPS13A-204ENST00000376634 I6L893 689 aaPredicted RBP11.46□□□□□ -0.57
VPS13A-204ENST00000376634 OR7C2O60412 319 aa11.46□□□□□ -0.57
VPS13A-204ENST00000376634 CTXN2P0C2S0 81 aa11.46□□□□□ -0.57
VPS13A-204ENST00000376634 RAB6CQ53S08 254 aa11.46□□□□□ -0.57
VPS13A-204ENST00000376634 NXNL2Q5VZ03 156 aa11.46□□□□□ -0.57
VPS13A-204ENST00000376634 ADAMTSL4Q6UY14 1074 aa11.46□□□□□ -0.57
VPS13A-204ENST00000376634 OR2M7Q8NG81 312 aa11.46□□□□□ -0.57
VPS13A-204ENST00000376634 NMNAT3Q96T66 252 aa11.46□□□□□ -0.57
VPS13A-204ENST00000376634 ACTL7AQ9Y615 435 aa11.46□□□□□ -0.57
VPS13A-204ENST00000376634 PLRG1O43660 514 aaKnown RBP11.46□□□□□ -0.57
VPS13A-204ENST00000376634 ATXN1LP0C7T5 689 aaKnown RBP11.46□□□□□ -0.57
VPS13A-204ENST00000376634 CTSCP53634 463 aa11.46□□□□□ -0.57
VPS13A-204ENST00000376634 ZNF90Q03938 601 aa11.46□□□□□ -0.57
VPS13A-204ENST00000376634 ZNF239Q16600 458 aaKnown RBP11.46□□□□□ -0.57
VPS13A-204ENST00000376634 OR5B3Q8NH48 314 aa11.46□□□□□ -0.57
VPS13A-204ENST00000376634 S1PR3Q99500 378 aa11.46□□□□□ -0.57
VPS13A-204ENST00000376634 S100A8P05109 93 aa11.46□□□□□ -0.57
VPS13A-204ENST00000376634 OR10A3P58181 314 aa11.46□□□□□ -0.57
VPS13A-204ENST00000376634 ZNF789Q5FWF6 425 aa11.46□□□□□ -0.57
VPS13A-204ENST00000376634 PLXDC2Q6UX71 529 aa11.46□□□□□ -0.57
VPS13A-204ENST00000376634 IKZF5Q9H5V7 419 aa11.46□□□□□ -0.57
VPS13A-204ENST00000376634 ZMAT3Q9HA38 289 aaKnown RBP11.46□□□□□ -0.57
VPS13A-204ENST00000376634 PPP1R3CQ9UQK1 317 aa11.46□□□□□ -0.57
VPS13A-204ENST00000376634 FKBP2P26885 142 aaKnown RBP11.46□□□□□ -0.58
VPS13A-204ENST00000376634 CDK5Q00535 292 aa11.46□□□□□ -0.58
VPS13A-204ENST00000376634 HAGHQ16775 308 aa11.46□□□□□ -0.58
VPS13A-204ENST00000376634 OR6M1Q8NGM8 313 aa11.46□□□□□ -0.58
VPS13A-204ENST00000376634 APH1BQ8WW43 257 aa11.46□□□□□ -0.58
VPS13A-204ENST00000376634 GALR2O43603 387 aaPredicted RBP11.46□□□□□ -0.58
VPS13A-204ENST00000376634 SPI1P17947 270 aa11.46□□□□□ -0.58
VPS13A-204ENST00000376634 GLIPR1L1Q6UWM5 242 aa11.46□□□□□ -0.58
VPS13A-204ENST00000376634 TMUB2Q71RG4 321 aa11.46□□□□□ -0.58
VPS13A-204ENST00000376634 NLRC3Q7RTR2 1065 aa11.46□□□□□ -0.58
VPS13A-204ENST00000376634 RPA2P15927 270 aa11.46□□□□□ -0.58
VPS13A-204ENST00000376634 CR2P20023 1033 aa11.46□□□□□ -0.58
VPS13A-204ENST00000376634 PDZK1IP1Q13113 114 aa11.46□□□□□ -0.58
VPS13A-204ENST00000376634 ACOT6Q3I5F7 207 aaPredicted RBP11.46□□□□□ -0.58
VPS13A-204ENST00000376634 TIGITQ495A1 244 aa11.46□□□□□ -0.58
VPS13A-204ENST00000376634 PRAMEF5Q5TYX0 476 aa11.46□□□□□ -0.58
VPS13A-204ENST00000376634 PRAMEF6Q5VXH4 476 aa11.46□□□□□ -0.58
VPS13A-204ENST00000376634 H1FNTQ75WM6 255 aaPredicted RBP11.46□□□□□ -0.58
VPS13A-204ENST00000376634 LRRTM1Q86UE6 522 aa11.46□□□□□ -0.58
VPS13A-204ENST00000376634 ZPBPQ9BS86 351 aa11.46□□□□□ -0.58
VPS13A-204ENST00000376634 KLF16Q9BXK1 252 aaPredicted RBP11.46□□□□□ -0.58
VPS13A-204ENST00000376634 MMACHCQ9Y4U1 282 aa11.46□□□□□ -0.58
VPS13A-204ENST00000376634 FABP7O15540 132 aa11.45□□□□□ -0.58
VPS13A-204ENST00000376634 ATOH1Q92858 354 aaPredicted RBP11.45□□□□□ -0.58
VPS13A-204ENST00000376634 TSLPQ969D9 159 aa11.45□□□□□ -0.58
VPS13A-204ENST00000376634 TET1Q8NFU7 2136 aa11.45□□□□□ -0.58
VPS13A-204ENST00000376634 FBXO46Q6PJ61 603 aaPredicted RBP11.45□□□□□ -0.58
VPS13A-204ENST00000376634 OR2AE1Q8NHA4 323 aa11.45□□□□□ -0.58
VPS13A-204ENST00000376634 HDAC8Q9BY41 377 aa11.45□□□□□ -0.58
VPS13A-204ENST00000376634 OR2M5A3KFT3 312 aa11.45□□□□□ -0.58
VPS13A-204ENST00000376634 ARNTLO00327 626 aa11.45□□□□□ -0.58
VPS13A-204ENST00000376634 JTBO76095 146 aa11.45□□□□□ -0.58
VPS13A-204ENST00000376634 TCN2P20062 427 aa11.45□□□□□ -0.58
VPS13A-204ENST00000376634 HCCSP53701 268 aa11.45□□□□□ -0.58
VPS13A-204ENST00000376634 TMEM97Q5BJF2 176 aa11.45□□□□□ -0.58
VPS13A-204ENST00000376634 SLC35D3Q5M8T2 416 aa11.45□□□□□ -0.58
VPS13A-204ENST00000376634 FRMPD2BQ6IN97 320 aa11.45□□□□□ -0.58
VPS13A-204ENST00000376634 OR51H1Q8NH63 302 aa11.45□□□□□ -0.58
VPS13A-204ENST00000376634 RASD2Q96D21 266 aa11.45□□□□□ -0.58
VPS13A-204ENST00000376634 CSAG2Q9Y5P2 127 aa11.45□□□□□ -0.58
VPS13A-204ENST00000376634 M0QZ24 198 aa11.45□□□□□ -0.58
VPS13A-204ENST00000376634 LGI1O95970 557 aa11.45□□□□□ -0.58
VPS13A-204ENST00000376634 ARR3P36575 388 aa11.45□□□□□ -0.58
VPS13A-204ENST00000376634 OR52I1Q8NGK6 324 aa11.45□□□□□ -0.58
VPS13A-204ENST00000376634 P2RY12Q9H244 342 aa11.45□□□□□ -0.58
VPS13A-204ENST00000376634 LRRK1Q38SD2 2015 aa11.45□□□□□ -0.58
VPS13A-204ENST00000376634 BCORQ6W2J9 1755 aa11.45□□□□□ -0.58
VPS13A-204ENST00000376634 A0A1B0GX78 115 aa11.45□□□□□ -0.58
VPS13A-204ENST00000376634 LRRC3CA6NJW4 275 aa11.45□□□□□ -0.58
VPS13A-204ENST00000376634 HCRTR1O43613 425 aa11.45□□□□□ -0.58
VPS13A-204ENST00000376634 CSO75390 466 aaKnown RBP11.45□□□□□ -0.58
VPS13A-204ENST00000376634 CD1CP29017 333 aa11.45□□□□□ -0.58
VPS13A-204ENST00000376634 RGRP47804 291 aa11.45□□□□□ -0.58
VPS13A-204ENST00000376634 ADPRMQ3LIE5 342 aa11.45□□□□□ -0.58
VPS13A-204ENST00000376634 YOD1Q5VVQ6 348 aaPredicted RBP11.45□□□□□ -0.58
VPS13A-204ENST00000376634 HOXD9P28356 352 aaPredicted RBP11.45□□□□□ -0.58
VPS13A-204ENST00000376634 BAK1Q16611 211 aa11.45□□□□□ -0.58
VPS13A-204ENST00000376634 PRTGQ2VWP7 1150 aa11.45□□□□□ -0.58
VPS13A-204ENST00000376634 FAM78AQ5JUQ0 283 aa11.45□□□□□ -0.58
VPS13A-204ENST00000376634 OR13C8Q8NGS7 320 aa11.45□□□□□ -0.58
VPS13A-204ENST00000376634 SCARB1Q8WTV0 552 aa11.45□□□□□ -0.58
VPS13A-204ENST00000376634 DLL4Q9NR61 685 aa11.45□□□□□ -0.58
VPS13A-204ENST00000376634 SLC23A1Q9UHI7 598 aa11.45□□□□□ -0.58
VPS13A-204ENST00000376634 A0A0U1RQS6 177 aa11.45□□□□□ -0.58
VPS13A-204ENST00000376634 SLC5A10A0PJK1 596 aa11.45□□□□□ -0.58
VPS13A-204ENST00000376634 OR51A4Q8NGJ6 313 aa11.45□□□□□ -0.58
VPS13A-204ENST00000376634 PHYHIPQ92561 330 aa11.45□□□□□ -0.58
VPS13A-204ENST00000376634 CMTM3Q96MX0 182 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms