RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 GPR17Q13304 367 aa8.07□□□□□ -1.12
UBR4-201ENST00000375218 C9orf57Q5W0N0 161 aa8.07□□□□□ -1.12
UBR4-201ENST00000375218 H3F3CQ6NXT2 135 aa8.07□□□□□ -1.12
UBR4-201ENST00000375218 MEPCEQ7L2J0 689 aaKnown RBP8.07□□□□□ -1.12
UBR4-201ENST00000375218 DYRK2Q92630 601 aa8.07□□□□□ -1.12
UBR4-201ENST00000375218 FBXL8Q96CD0 374 aa8.07□□□□□ -1.12
UBR4-201ENST00000375218 AMBRA1Q9C0C7 1298 aa8.07□□□□□ -1.12
UBR4-201ENST00000375218 FCF1Q9Y324 198 aaKnown RBP8.07□□□□□ -1.12
UBR4-201ENST00000375218 NFATC1O95644 943 aa8.07□□□□□ -1.12
UBR4-201ENST00000375218 MBPP02686 304 aaPredicted RBP8.07□□□□□ -1.12
UBR4-201ENST00000375218 SCGB1A1P11684 91 aa8.07□□□□□ -1.12
UBR4-201ENST00000375218 TAS2R50P59544 299 aa8.07□□□□□ -1.12
UBR4-201ENST00000375218 SEMA3BQ13214 749 aa8.07□□□□□ -1.12
UBR4-201ENST00000375218 UPP1Q16831 310 aa8.07□□□□□ -1.12
UBR4-201ENST00000375218 ZNF787Q6DD87 383 aa8.07□□□□□ -1.12
UBR4-201ENST00000375218 OR4A4PQ8NGN8 299 aa8.07□□□□□ -1.12
UBR4-201ENST00000375218 RORBQ92753 470 aa8.07□□□□□ -1.12
UBR4-201ENST00000375218 SMARCD1Q96GM5 515 aa8.07□□□□□ -1.12
UBR4-201ENST00000375218 SLC45A3Q96JT2 553 aa8.07□□□□□ -1.12
UBR4-201ENST00000375218 DDIT4Q9NX09 232 aa8.07□□□□□ -1.12
UBR4-201ENST00000375218 FAM90A10PA6NDY2 464 aa8.07□□□□□ -1.12
UBR4-201ENST00000375218 DHRS7CA6NNS2 312 aa8.07□□□□□ -1.12
UBR4-201ENST00000375218 OR11H12B2RN74 326 aa8.07□□□□□ -1.12
UBR4-201ENST00000375218 LAMTOR5O43504 91 aa8.07□□□□□ -1.12
UBR4-201ENST00000375218 ALOX12BO75342 701 aa8.07□□□□□ -1.12
UBR4-201ENST00000375218 DIRAS1O95057 198 aa8.07□□□□□ -1.12
UBR4-201ENST00000375218 GADD45GO95257 159 aa8.07□□□□□ -1.12
UBR4-201ENST00000375218 ARRB2P32121 409 aa8.07□□□□□ -1.12
UBR4-201ENST00000375218 NBL1P41271 181 aa8.07□□□□□ -1.12
UBR4-201ENST00000375218 LHX1P48742 406 aa8.07□□□□□ -1.12
UBR4-201ENST00000375218 DNASE1L1P49184 302 aa8.07□□□□□ -1.12
UBR4-201ENST00000375218 RNPS1Q15287 305 aaKnown RBP8.07□□□□□ -1.12
UBR4-201ENST00000375218 ARL13AQ5H913 290 aaPredicted RBP8.07□□□□□ -1.12
UBR4-201ENST00000375218 DNM1P34Q6PK57 102 aa8.07□□□□□ -1.12
UBR4-201ENST00000375218 NAPRTQ6XQN6 538 aa8.07□□□□□ -1.12
UBR4-201ENST00000375218 NOXA1Q86UR1 476 aa8.07□□□□□ -1.12
UBR4-201ENST00000375218 C10orf107Q8IVU9 208 aa8.07□□□□□ -1.12
UBR4-201ENST00000375218 OR11H1Q8NG94 326 aa8.07□□□□□ -1.12
UBR4-201ENST00000375218 OR1K1Q8NGR3 316 aa8.07□□□□□ -1.12
UBR4-201ENST00000375218 OR11H2Q8NH07 326 aa8.07□□□□□ -1.12
UBR4-201ENST00000375218 NAT6Q93015 286 aa8.07□□□□□ -1.12
UBR4-201ENST00000375218 ZNF641Q96N77 438 aaPredicted RBP8.07□□□□□ -1.12
UBR4-201ENST00000375218 CMSS1Q9BQ75 279 aaKnown RBP8.07□□□□□ -1.12
UBR4-201ENST00000375218 CIPCQ9C0C6 399 aa8.07□□□□□ -1.12
UBR4-201ENST00000375218 RNF6Q9Y252 685 aa8.07□□□□□ -1.12
UBR4-201ENST00000375218 TMEM213A2RRL7 107 aa8.06□□□□□ -1.12
UBR4-201ENST00000375218 SNRPCP09234 159 aaKnown RBP8.06□□□□□ -1.12
UBR4-201ENST00000375218 FAHP16930 419 aa8.06□□□□□ -1.12
UBR4-201ENST00000375218 DCAF10Q5QP82 559 aa8.06□□□□□ -1.12
UBR4-201ENST00000375218 FAM71F2Q6NXP2 309 aa8.06□□□□□ -1.12
UBR4-201ENST00000375218 CHMP1BQ7LBR1 199 aa8.06□□□□□ -1.12
UBR4-201ENST00000375218 IGDCC3Q8IVU1 814 aa8.06□□□□□ -1.12
UBR4-201ENST00000375218 C9orf62Q8N4C0 152 aa8.06□□□□□ -1.12
UBR4-201ENST00000375218 DNAJC22Q8N4W6 341 aa8.06□□□□□ -1.12
UBR4-201ENST00000375218 BOLLQ8N9W6 283 aaKnown RBP8.06□□□□□ -1.12
UBR4-201ENST00000375218 OR13G1Q8NGZ3 307 aa8.06□□□□□ -1.12
UBR4-201ENST00000375218 RAB3CQ96E17 227 aa8.06□□□□□ -1.12
UBR4-201ENST00000375218 CENPNQ96H22 339 aaPredicted RBP8.06□□□□□ -1.12
UBR4-201ENST00000375218 COL21A1Q96P44 957 aa8.06□□□□□ -1.12
UBR4-201ENST00000375218 OR5B12Q96R08 314 aa8.06□□□□□ -1.12
UBR4-201ENST00000375218 RSPO3Q9BXY4 272 aaPredicted RBP8.06□□□□□ -1.12
UBR4-201ENST00000375218 MROQ9BYG7 248 aa8.06□□□□□ -1.12
UBR4-201ENST00000375218 MANSC1Q9H8J5 431 aa8.06□□□□□ -1.12
UBR4-201ENST00000375218 KCNK9Q9NPC2 374 aa8.06□□□□□ -1.12
UBR4-201ENST00000375218 IKZF2Q9UKS7 526 aa8.06□□□□□ -1.12
UBR4-201ENST00000375218 TMED7Q9Y3B3 224 aa8.06□□□□□ -1.12
UBR4-201ENST00000375218 A3GALT2U3KPV4 340 aa8.06□□□□□ -1.12
UBR4-201ENST00000375218 DOCK9Q9BZ29 2069 aa8.06□□□□□ -1.12
UBR4-201ENST00000375218 DUSP11O75319 330 aaKnown RBP8.06□□□□□ -1.12
UBR4-201ENST00000375218 BANF1O75531 89 aa8.06□□□□□ -1.12
UBR4-201ENST00000375218 GLSO94925 669 aaPredicted RBP8.06□□□□□ -1.12
UBR4-201ENST00000375218 TNFRSF4P43489 277 aa8.06□□□□□ -1.12
UBR4-201ENST00000375218 BDKRB1P46663 353 aa8.06□□□□□ -1.12
UBR4-201ENST00000375218 RPL21P46778 160 aaKnown RBP8.06□□□□□ -1.12
UBR4-201ENST00000375218 FOXE3Q13461 319 aa8.06□□□□□ -1.12
UBR4-201ENST00000375218 TIGD5Q53EQ6 642 aa8.06□□□□□ -1.12
UBR4-201ENST00000375218 ANKRD22Q5VYY1 191 aa8.06□□□□□ -1.12
UBR4-201ENST00000375218 SCD5Q86SK9 330 aa8.06□□□□□ -1.12
UBR4-201ENST00000375218 PELI3Q8N2H9 469 aa8.06□□□□□ -1.12
UBR4-201ENST00000375218 FAM45AQ8TCE6 357 aa8.06□□□□□ -1.12
UBR4-201ENST00000375218 TRUB1Q8WWH5 349 aaKnown RBP8.06□□□□□ -1.12
UBR4-201ENST00000375218 ACOT12Q8WYK0 555 aa8.06□□□□□ -1.12
UBR4-201ENST00000375218 GGHQ92820 318 aa8.06□□□□□ -1.12
UBR4-201ENST00000375218 SLC17A5Q9NRA2 495 aa8.06□□□□□ -1.12
UBR4-201ENST00000375218 PLSCR3Q9NRY6 295 aa8.06□□□□□ -1.12
UBR4-201ENST00000375218 PSMB11A5LHX3 300 aa8.06□□□□□ -1.12
UBR4-201ENST00000375218 MANBAO00462 879 aa8.06□□□□□ -1.12
UBR4-201ENST00000375218 CDIPTO14735 213 aa8.06□□□□□ -1.12
UBR4-201ENST00000375218 PTTG1O95997 202 aa8.06□□□□□ -1.12
UBR4-201ENST00000375218 ADH4P08319 380 aa8.06□□□□□ -1.12
UBR4-201ENST00000375218 DBHP09172 617 aa8.06□□□□□ -1.12
UBR4-201ENST00000375218 CT62P0C5K7 136 aa8.06□□□□□ -1.12
UBR4-201ENST00000375218 IL1RNP18510 177 aa8.06□□□□□ -1.12
UBR4-201ENST00000375218 CD58P19256 250 aa8.06□□□□□ -1.12
UBR4-201ENST00000375218 EPHA1P21709 976 aa8.06□□□□□ -1.12
UBR4-201ENST00000375218 OR3A1P47881 315 aa8.06□□□□□ -1.12
UBR4-201ENST00000375218 CDKN2DP55273 166 aa8.06□□□□□ -1.12
UBR4-201ENST00000375218 FHL3Q13643 280 aa8.06□□□□□ -1.12
UBR4-201ENST00000375218 CYBRD1Q53TN4 286 aa8.06□□□□□ -1.12
UBR4-201ENST00000375218 SIRPB2Q5JXA9 342 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms