RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 SMIM4Q8WVI0 70 aa11.14□□□□□ -0.63
PRPF4-202ENST00000374199 RAB40AQ8WXH6 277 aa11.14□□□□□ -0.63
PRPF4-202ENST00000374199 TMEM45BQ96B21 275 aa11.14□□□□□ -0.63
PRPF4-202ENST00000374199 HAVCR1Q96D42 359 aa11.14□□□□□ -0.63
PRPF4-202ENST00000374199 AGAP4Q96P64 663 aa11.14□□□□□ -0.63
PRPF4-202ENST00000374199 RBP7Q96R05 134 aa11.14□□□□□ -0.63
PRPF4-202ENST00000374199 STMND1H3BQB6 276 aa11.13□□□□□ -0.63
PRPF4-202ENST00000374199 RPP14O95059 124 aaKnown RBP11.13□□□□□ -0.63
PRPF4-202ENST00000374199 UBCP0CG48 685 aaKnown RBP11.13□□□□□ -0.63
PRPF4-202ENST00000374199 SNRPBP14678 240 aaKnown RBP11.13□□□□□ -0.63
PRPF4-202ENST00000374199 PTH2RP49190 550 aa11.13□□□□□ -0.63
PRPF4-202ENST00000374199 CYB561P49447 251 aa11.13□□□□□ -0.63
PRPF4-202ENST00000374199 AIMP2Q13155 320 aaKnown RBP11.13□□□□□ -0.63
PRPF4-202ENST00000374199 C1orf100Q5SVJ3 147 aa11.13□□□□□ -0.63
PRPF4-202ENST00000374199 TMEM164Q5U3C3 297 aa11.13□□□□□ -0.63
PRPF4-202ENST00000374199 PLPP7Q8NBV4 271 aa11.13□□□□□ -0.63
PRPF4-202ENST00000374199 HTRA1Q92743 480 aa11.13□□□□□ -0.63
PRPF4-202ENST00000374199 NIPAL2Q9H841 368 aa11.13□□□□□ -0.63
PRPF4-202ENST00000374199 ZFP64Q9NPA5 681 aa11.13□□□□□ -0.63
PRPF4-202ENST00000374199 NUFIP1Q9UHK0 495 aaKnown RBP11.13□□□□□ -0.63
PRPF4-202ENST00000374199 FBXL3Q9UKT7 428 aa11.13□□□□□ -0.63
PRPF4-202ENST00000374199 DOK2O60496 412 aa11.13□□□□□ -0.63
PRPF4-202ENST00000374199 P04436 131 aa11.13□□□□□ -0.63
PRPF4-202ENST00000374199 DDOSTP39656 456 aa11.13□□□□□ -0.63
PRPF4-202ENST00000374199 CD96P40200 585 aa11.13□□□□□ -0.63
PRPF4-202ENST00000374199 CLDN20P56880 219 aa11.13□□□□□ -0.63
PRPF4-202ENST00000374199 IL18Q14116 193 aa11.13□□□□□ -0.63
PRPF4-202ENST00000374199 TMEM225Q6GV28 225 aa11.13□□□□□ -0.63
PRPF4-202ENST00000374199 ESPNLQ6ZVH7 1005 aa11.13□□□□□ -0.63
PRPF4-202ENST00000374199 CMTM4Q8IZR5 234 aa11.13□□□□□ -0.63
PRPF4-202ENST00000374199 DEDD2Q8WXF8 326 aa11.13□□□□□ -0.63
PRPF4-202ENST00000374199 TMEM106AQ96A25 262 aa11.13□□□□□ -0.63
PRPF4-202ENST00000374199 PTX4Q96A99 478 aa11.13□□□□□ -0.63
PRPF4-202ENST00000374199 SLAMF6Q96DU3 332 aa11.13□□□□□ -0.63
PRPF4-202ENST00000374199 NAA11Q9BSU3 229 aaPredicted RBP11.13□□□□□ -0.63
PRPF4-202ENST00000374199 EMC6Q9BV81 110 aa11.13□□□□□ -0.63
PRPF4-202ENST00000374199 GLTPQ9NZD2 209 aa11.13□□□□□ -0.63
PRPF4-202ENST00000374199 STEAP1Q9UHE8 339 aa11.13□□□□□ -0.63
PRPF4-202ENST00000374199 DKKL1Q9UK85 242 aa11.13□□□□□ -0.63
PRPF4-202ENST00000374199 IKZF2Q9UKS7 526 aa11.13□□□□□ -0.63
PRPF4-202ENST00000374199 CIB4A0PJX0 185 aa11.13□□□□□ -0.63
PRPF4-202ENST00000374199 TTRP02766 147 aa11.13□□□□□ -0.63
PRPF4-202ENST00000374199 ADRB1P08588 477 aa11.13□□□□□ -0.63
PRPF4-202ENST00000374199 AZGP1P25311 298 aaKnown RBP11.13□□□□□ -0.63
PRPF4-202ENST00000374199 PSMA6P60900 246 aaKnown RBP11.13□□□□□ -0.63
PRPF4-202ENST00000374199 SPEM2Q0P670 501 aa11.13□□□□□ -0.63
PRPF4-202ENST00000374199 KLF9Q13886 244 aaPredicted RBP11.13□□□□□ -0.63
PRPF4-202ENST00000374199 ENDOGQ14249 297 aaKnown RBP11.13□□□□□ -0.63
PRPF4-202ENST00000374199 DHRS13Q6UX07 377 aa11.13□□□□□ -0.63
PRPF4-202ENST00000374199 BIVMQ86UB2 503 aa11.13□□□□□ -0.63
PRPF4-202ENST00000374199 FAM173AQ9BQD7 235 aa11.13□□□□□ -0.63
PRPF4-202ENST00000374199 LIN7BQ9HAP6 207 aa11.13□□□□□ -0.63
PRPF4-202ENST00000374199 ASCL3Q9NQ33 180 aa11.13□□□□□ -0.63
PRPF4-202ENST00000374199 FBLN5Q9UBX5 448 aa11.13□□□□□ -0.63
PRPF4-202ENST00000374199 OR52A1Q9UKL2 312 aa11.13□□□□□ -0.63
PRPF4-202ENST00000374199 SLC22A13Q9Y226 551 aa11.13□□□□□ -0.63
PRPF4-202ENST00000374199 A0A0B4J203 849 aa11.12□□□□□ -0.63
PRPF4-202ENST00000374199 A0A1B0GTI1 187 aa11.12□□□□□ -0.63
PRPF4-202ENST00000374199 ZNF43P17038 809 aa11.12□□□□□ -0.63
PRPF4-202ENST00000374199 DNASE1L1P49184 302 aa11.12□□□□□ -0.63
PRPF4-202ENST00000374199 PITPNAQ00169 270 aa11.12□□□□□ -0.63
PRPF4-202ENST00000374199 ZNF704Q6ZNC4 412 aaPredicted RBP11.12□□□□□ -0.63
PRPF4-202ENST00000374199 KRT77Q7Z794 578 aa11.12□□□□□ -0.63
PRPF4-202ENST00000374199 CDH26Q8IXH8 852 aa11.12□□□□□ -0.63
PRPF4-202ENST00000374199 ORAI1Q96D31 301 aa11.12□□□□□ -0.63
PRPF4-202ENST00000374199 SCMH1Q96GD3 660 aa11.12□□□□□ -0.63
PRPF4-202ENST00000374199 C7orf50Q9BRJ6 194 aaKnown RBP11.12□□□□□ -0.63
PRPF4-202ENST00000374199 THAP7Q9BT49 309 aaPredicted RBP11.12□□□□□ -0.63
PRPF4-202ENST00000374199 C1orf198Q9H425 327 aa11.12□□□□□ -0.63
PRPF4-202ENST00000374199 RNF122Q9H9V4 155 aa11.12□□□□□ -0.63
PRPF4-202ENST00000374199 GDF2Q9UK05 429 aaPredicted RBP11.12□□□□□ -0.63
PRPF4-202ENST00000374199 SLC17A2O00624 439 aa11.12□□□□□ -0.63
PRPF4-202ENST00000374199 CYTIPO60759 359 aa11.12□□□□□ -0.63
PRPF4-202ENST00000374199 ZNF823P16415 610 aa11.12□□□□□ -0.63
PRPF4-202ENST00000374199 HLA-DMAP28067 261 aa11.12□□□□□ -0.63
PRPF4-202ENST00000374199 NTF4P34130 210 aa11.12□□□□□ -0.63
PRPF4-202ENST00000374199 CLRN1P58418 232 aa11.12□□□□□ -0.63
PRPF4-202ENST00000374199 DYRK1AQ13627 763 aa11.12□□□□□ -0.63
PRPF4-202ENST00000374199 NRN1LQ496H8 165 aa11.12□□□□□ -0.63
PRPF4-202ENST00000374199 OR2M7Q8NG81 312 aa11.12□□□□□ -0.63
PRPF4-202ENST00000374199 FOXN4Q96NZ1 517 aa11.12□□□□□ -0.63
PRPF4-202ENST00000374199 SLC25A18Q9H1K4 315 aa11.12□□□□□ -0.63
PRPF4-202ENST00000374199 TMEM185BQ9H7F4 350 aa11.12□□□□□ -0.63
PRPF4-202ENST00000374199 MRPS18BQ9Y676 258 aaKnown RBP11.12□□□□□ -0.63
PRPF4-202ENST00000374199 A0A1W2PPK0 400 aa11.11□□□□□ -0.63
PRPF4-202ENST00000374199 BOLA2-SMG1P6H3BVE0 249 aa11.11□□□□□ -0.63
PRPF4-202ENST00000374199 LYRM1O43325 122 aa11.11□□□□□ -0.63
PRPF4-202ENST00000374199 MAP2K3P46734 347 aa11.11□□□□□ -0.63
PRPF4-202ENST00000374199 CD300CQ08708 224 aa11.11□□□□□ -0.63
PRPF4-202ENST00000374199 TMPRSS12Q86WS5 348 aa11.11□□□□□ -0.63
PRPF4-202ENST00000374199 THOC3Q96J01 351 aaKnown RBP11.11□□□□□ -0.63
PRPF4-202ENST00000374199 ZNF878C9JN71 531 aa11.11□□□□□ -0.63
PRPF4-202ENST00000374199 TM4SF5O14894 197 aa11.11□□□□□ -0.63
PRPF4-202ENST00000374199 HLA-DQA2P01906 255 aa11.11□□□□□ -0.63
PRPF4-202ENST00000374199 SFTPDP35247 375 aa11.11□□□□□ -0.63
PRPF4-202ENST00000374199 LHX2P50458 406 aa11.11□□□□□ -0.63
PRPF4-202ENST00000374199 MRPS10P82664 201 aaKnown RBP11.11□□□□□ -0.63
PRPF4-202ENST00000374199 RSPO1Q2MKA7 263 aaPredicted RBP11.11□□□□□ -0.63
PRPF4-202ENST00000374199 RIPPLY2Q5TAB7 128 aa11.11□□□□□ -0.63
PRPF4-202ENST00000374199 OR7E24Q6IFN5 339 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms