RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 HAS2Q92819 552 aa12.79□□□□□ -0.36
HMGA1-203ENST00000374116 GHSRQ92847 366 aa12.79□□□□□ -0.36
HMGA1-203ENST00000374116 RFT1Q96AA3 541 aa12.79□□□□□ -0.36
HMGA1-203ENST00000374116 NMNAT3Q96T66 252 aa12.79□□□□□ -0.36
HMGA1-203ENST00000374116 WACQ9BTA9 647 aa12.79□□□□□ -0.36
HMGA1-203ENST00000374116 SLC25A18Q9H1K4 315 aa12.79□□□□□ -0.36
HMGA1-203ENST00000374116 ABI3Q9P2A4 366 aa12.79□□□□□ -0.36
HMGA1-203ENST00000374116 COPS3Q9UNS2 423 aa12.79□□□□□ -0.36
HMGA1-203ENST00000374116 CACNG2Q9Y698 323 aa12.79□□□□□ -0.36
HMGA1-203ENST00000374116 KALRNO60229 2985 aa12.79□□□□□ -0.36
HMGA1-203ENST00000374116 C2orf72A6NCS6 295 aa12.78□□□□□ -0.36
HMGA1-203ENST00000374116 C17orf51A8MQB3 221 aa12.78□□□□□ -0.36
HMGA1-203ENST00000374116 MPTX1A8MV57 137 aa12.78□□□□□ -0.36
HMGA1-203ENST00000374116 ALG1L2C9J202 215 aa12.78□□□□□ -0.36
HMGA1-203ENST00000374116 G3V3Q6 166 aa12.78□□□□□ -0.36
HMGA1-203ENST00000374116 GPR171O14626 319 aa12.78□□□□□ -0.36
HMGA1-203ENST00000374116 IMPA2O14732 288 aa12.78□□□□□ -0.36
HMGA1-203ENST00000374116 CCL3P10147 92 aa12.78□□□□□ -0.36
HMGA1-203ENST00000374116 SPI1P17947 270 aa12.78□□□□□ -0.36
HMGA1-203ENST00000374116 ACVR1BP36896 505 aa12.78□□□□□ -0.36
HMGA1-203ENST00000374116 TNFSF10P50591 281 aa12.78□□□□□ -0.36
HMGA1-203ENST00000374116 TP53I3Q53FA7 332 aa12.78□□□□□ -0.36
HMGA1-203ENST00000374116 ACSM3Q53FZ2 586 aa12.78□□□□□ -0.36
HMGA1-203ENST00000374116 RPL22L1Q6P5R6 122 aaKnown RBP12.78□□□□□ -0.36
HMGA1-203ENST00000374116 RPTNQ6XPR3 784 aa12.78□□□□□ -0.36
HMGA1-203ENST00000374116 LRRC28Q86X40 367 aaPredicted RBP12.78□□□□□ -0.36
HMGA1-203ENST00000374116 C10orf53Q8N6V4 93 aa12.78□□□□□ -0.36
HMGA1-203ENST00000374116 SNX33Q8WV41 574 aa12.78□□□□□ -0.36
HMGA1-203ENST00000374116 SPACA9Q96E40 222 aaPredicted RBP12.78□□□□□ -0.36
HMGA1-203ENST00000374116 KLHDC3Q9BQ90 382 aa12.78□□□□□ -0.36
HMGA1-203ENST00000374116 C7orf50Q9BRJ6 194 aaKnown RBP12.78□□□□□ -0.36
HMGA1-203ENST00000374116 ADAM19Q9H013 955 aa12.78□□□□□ -0.36
HMGA1-203ENST00000374116 NANSQ9NR45 359 aa12.78□□□□□ -0.36
HMGA1-203ENST00000374116 CYSLTR2Q9NS75 346 aa12.78□□□□□ -0.36
HMGA1-203ENST00000374116 KCNK7Q9Y2U2 307 aa12.78□□□□□ -0.36
HMGA1-203ENST00000374116 TRAV1-2A0A0B4J238 106 aa12.78□□□□□ -0.36
HMGA1-203ENST00000374116 A0A0G2JMM0 328 aa12.78□□□□□ -0.36
HMGA1-203ENST00000374116 A0A1W2PPB8 328 aa12.78□□□□□ -0.36
HMGA1-203ENST00000374116 A0A1W2PRS3 328 aa12.78□□□□□ -0.36
HMGA1-203ENST00000374116 OR6C68A6NDL8 312 aa12.78□□□□□ -0.36
HMGA1-203ENST00000374116 PCP4L1A6NKN8 68 aa12.78□□□□□ -0.36
HMGA1-203ENST00000374116 KIR3DP1A8MWS1 328 aa12.78□□□□□ -0.36
HMGA1-203ENST00000374116 ADAM10O14672 748 aa12.78□□□□□ -0.36
HMGA1-203ENST00000374116 SLC25A12O75746 678 aa12.78□□□□□ -0.36
HMGA1-203ENST00000374116 B3GALNT1O75752 331 aa12.78□□□□□ -0.36
HMGA1-203ENST00000374116 GLCEO94923 617 aa12.78□□□□□ -0.36
HMGA1-203ENST00000374116 PAHP00439 452 aa12.78□□□□□ -0.36
HMGA1-203ENST00000374116 CD14P08571 375 aa12.78□□□□□ -0.36
HMGA1-203ENST00000374116 IL12BP29460 328 aa12.78□□□□□ -0.36
HMGA1-203ENST00000374116 RFC3P40938 356 aa12.78□□□□□ -0.36
HMGA1-203ENST00000374116 SLC25A1P53007 311 aa12.78□□□□□ -0.36
HMGA1-203ENST00000374116 HCCSP53701 268 aa12.78□□□□□ -0.36
HMGA1-203ENST00000374116 PNLIPRP2P54317 469 aa12.78□□□□□ -0.36
HMGA1-203ENST00000374116 SIRPAP78324 504 aa12.78□□□□□ -0.36
HMGA1-203ENST00000374116 EGR4Q05215 589 aa12.78□□□□□ -0.36
HMGA1-203ENST00000374116 CDK5R1Q15078 307 aa12.78□□□□□ -0.36
HMGA1-203ENST00000374116 PLEKHN1Q494U1 663 aaPredicted RBP12.78□□□□□ -0.36
HMGA1-203ENST00000374116 LRRC75AQ8NAA5 344 aa12.78□□□□□ -0.36
HMGA1-203ENST00000374116 OR51L1Q8NGJ5 315 aa12.78□□□□□ -0.36
HMGA1-203ENST00000374116 MOSPD2Q8NHP6 518 aa12.78□□□□□ -0.36
HMGA1-203ENST00000374116 ZNF563Q8TA94 476 aa12.78□□□□□ -0.36
HMGA1-203ENST00000374116 RASD2Q96D21 266 aa12.78□□□□□ -0.36
HMGA1-203ENST00000374116 SMIM19Q96E16 107 aa12.78□□□□□ -0.36
HMGA1-203ENST00000374116 PELI1Q96FA3 418 aa12.78□□□□□ -0.36
HMGA1-203ENST00000374116 FAM208BQ5VWN6 2430 aa12.78□□□□□ -0.36
HMGA1-203ENST00000374116 H0YC42 278 aa12.77□□□□□ -0.37
HMGA1-203ENST00000374116 BLOC1S5-TXNDC5H3BN57 136 aa12.77□□□□□ -0.37
HMGA1-203ENST00000374116 FBXO45P0C2W1 286 aa12.77□□□□□ -0.37
HMGA1-203ENST00000374116 H2AFB1P0C5Y9 115 aa12.77□□□□□ -0.37
HMGA1-203ENST00000374116 H2AFB2P0C5Z0 115 aa12.77□□□□□ -0.37
HMGA1-203ENST00000374116 ASAH2BP0C7U1 165 aa12.77□□□□□ -0.37
HMGA1-203ENST00000374116 ELK1P19419 428 aa12.77□□□□□ -0.37
HMGA1-203ENST00000374116 CXCL3P19876 107 aa12.77□□□□□ -0.37
HMGA1-203ENST00000374116 AHCYP23526 432 aa12.77□□□□□ -0.37
HMGA1-203ENST00000374116 THBS2P35442 1172 aa12.77□□□□□ -0.37
HMGA1-203ENST00000374116 CASRP41180 1078 aa12.77□□□□□ -0.37
HMGA1-203ENST00000374116 AQP2P41181 271 aa12.77□□□□□ -0.37
HMGA1-203ENST00000374116 NAA10P41227 235 aaPredicted RBP12.77□□□□□ -0.37
HMGA1-203ENST00000374116 GDI2P50395 445 aaKnown RBP12.77□□□□□ -0.37
HMGA1-203ENST00000374116 PMP22Q01453 160 aa12.77□□□□□ -0.37
HMGA1-203ENST00000374116 ZMYND11Q15326 602 aa12.77□□□□□ -0.37
HMGA1-203ENST00000374116 INPP5JQ15735 1006 aaPredicted RBP12.77□□□□□ -0.37
HMGA1-203ENST00000374116 NTRK2Q16620 822 aa12.77□□□□□ -0.37
HMGA1-203ENST00000374116 GXYLT1Q4G148 440 aa12.77□□□□□ -0.37
HMGA1-203ENST00000374116 SFXN4Q6P4A7 337 aa12.77□□□□□ -0.37
HMGA1-203ENST00000374116 OPN5Q6U736 354 aa12.77□□□□□ -0.37
HMGA1-203ENST00000374116 IGFL3Q6UXB1 125 aa12.77□□□□□ -0.37
HMGA1-203ENST00000374116 GALNTL5Q7Z4T8 443 aa12.77□□□□□ -0.37
HMGA1-203ENST00000374116 JAZF1Q86VZ6 243 aa12.77□□□□□ -0.37
HMGA1-203ENST00000374116 RFLNBQ8N5W9 214 aa12.77□□□□□ -0.37
HMGA1-203ENST00000374116 ABCG5Q9H222 651 aa12.77□□□□□ -0.37
HMGA1-203ENST00000374116 DEPPQ9NTK1 212 aa12.77□□□□□ -0.37
HMGA1-203ENST00000374116 MALT1Q9UDY8 824 aa12.77□□□□□ -0.37
HMGA1-203ENST00000374116 ING1Q9UK53 422 aaPredicted RBP12.77□□□□□ -0.37
HMGA1-203ENST00000374116 MOKQ9UQ07 419 aa12.77□□□□□ -0.37
HMGA1-203ENST00000374116 CHCHD2Q9Y6H1 151 aaPredicted RBP12.77□□□□□ -0.37
HMGA1-203ENST00000374116 MPDZO75970 2070 aa12.77□□□□□ -0.37
HMGA1-203ENST00000374116 TEX13CA0A0J9YWL9 993 aa12.76□□□□□ -0.37
HMGA1-203ENST00000374116 EIF4E2O60573 245 aaKnown RBP12.76□□□□□ -0.37
HMGA1-203ENST00000374116 GATBO75879 557 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms