RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 KLF9Q13886 244 aaPredicted RBP7.78□□□□□ -1.16
SNRNP40-202ENST00000373720 INSL4Q14641 139 aa7.78□□□□□ -1.16
SNRNP40-202ENST00000373720 SLC25A35Q3KQZ1 300 aa7.78□□□□□ -1.16
SNRNP40-202ENST00000373720 SLC36A2Q495M3 483 aa7.78□□□□□ -1.16
SNRNP40-202ENST00000373720 WDR38Q5JTN6 314 aa7.78□□□□□ -1.16
SNRNP40-202ENST00000373720 RIPPLY2Q5TAB7 128 aa7.78□□□□□ -1.16
SNRNP40-202ENST00000373720 BCL2L15Q5TBC7 163 aa7.78□□□□□ -1.16
SNRNP40-202ENST00000373720 C1QL3Q5VWW1 255 aa7.78□□□□□ -1.16
SNRNP40-202ENST00000373720 CDCP2Q5VXM1 449 aa7.78□□□□□ -1.16
SNRNP40-202ENST00000373720 SLC25A25Q6KCM7 469 aa7.78□□□□□ -1.16
SNRNP40-202ENST00000373720 POMZP3Q6PJE2 187 aa7.78□□□□□ -1.16
SNRNP40-202ENST00000373720 SLC25A47Q6Q0C1 308 aa7.78□□□□□ -1.16
SNRNP40-202ENST00000373720 ARSKQ6UWY0 536 aa7.78□□□□□ -1.16
SNRNP40-202ENST00000373720 SHISA6Q6ZSJ9 500 aa7.78□□□□□ -1.16
SNRNP40-202ENST00000373720 ESPNLQ6ZVH7 1005 aa7.78□□□□□ -1.16
SNRNP40-202ENST00000373720 KRT74Q7RTS7 529 aa7.78□□□□□ -1.16
SNRNP40-202ENST00000373720 LUZP2Q86TE4 346 aa7.78□□□□□ -1.16
SNRNP40-202ENST00000373720 CMTM4Q8IZR5 234 aa7.78□□□□□ -1.16
SNRNP40-202ENST00000373720 PRSS35Q8N3Z0 413 aa7.78□□□□□ -1.16
SNRNP40-202ENST00000373720 SYNPRQ8TBG9 265 aa7.78□□□□□ -1.16
SNRNP40-202ENST00000373720 POC1BQ8TC44 478 aa7.78□□□□□ -1.16
SNRNP40-202ENST00000373720 LGALS14Q8TCE9 139 aa7.78□□□□□ -1.16
SNRNP40-202ENST00000373720 ZNF486Q96H40 463 aaPredicted RBP7.78□□□□□ -1.16
SNRNP40-202ENST00000373720 SLC25A21Q9BQT8 299 aaPredicted RBP7.78□□□□□ -1.16
SNRNP40-202ENST00000373720 SPRY4Q9C004 299 aa7.78□□□□□ -1.16
SNRNP40-202ENST00000373720 OR11A1Q9GZK7 315 aa7.78□□□□□ -1.16
SNRNP40-202ENST00000373720 EMC7Q9NPA0 242 aa7.78□□□□□ -1.16
SNRNP40-202ENST00000373720 TMEM138Q9NPI0 162 aa7.78□□□□□ -1.16
SNRNP40-202ENST00000373720 B3GAT2Q9NPZ5 323 aa7.78□□□□□ -1.16
SNRNP40-202ENST00000373720 DDX28Q9NUL7 540 aaKnown RBP7.78□□□□□ -1.16
SNRNP40-202ENST00000373720 NLKQ9UBE8 527 aa7.78□□□□□ -1.16
SNRNP40-202ENST00000373720 B4GALT7Q9UBV7 327 aa7.78□□□□□ -1.16
SNRNP40-202ENST00000373720 ATPIF1Q9UII2 106 aa7.78□□□□□ -1.16
SNRNP40-202ENST00000373720 RAB22AQ9UL26 194 aa7.78□□□□□ -1.16
SNRNP40-202ENST00000373720 BOKQ9UMX3 212 aaPredicted RBP7.78□□□□□ -1.16
SNRNP40-202ENST00000373720 VDAC3Q9Y277 283 aa7.78□□□□□ -1.16
SNRNP40-202ENST00000373720 SEC16AO15027 2179 aa7.78□□□□□ -1.16
SNRNP40-202ENST00000373720 KNL1Q8NG31 2342 aa7.78□□□□□ -1.16
SNRNP40-202ENST00000373720 A0A0U1RQV5 110 aa7.77□□□□□ -1.17
SNRNP40-202ENST00000373720 GGT3PA6NGU5 568 aa7.77□□□□□ -1.17
SNRNP40-202ENST00000373720 H3BUI4 141 aa7.77□□□□□ -1.17
SNRNP40-202ENST00000373720 H7C417 338 aa7.77□□□□□ -1.17
SNRNP40-202ENST00000373720 EEF1E1O43324 174 aaKnown RBP7.77□□□□□ -1.17
SNRNP40-202ENST00000373720 TRAF3IP2O43734 574 aaPredicted RBP7.77□□□□□ -1.17
SNRNP40-202ENST00000373720 MTRF1O75570 445 aaKnown RBP7.77□□□□□ -1.17
SNRNP40-202ENST00000373720 JMJD7P0C870 316 aa7.77□□□□□ -1.17
SNRNP40-202ENST00000373720 SPNP16150 400 aa7.77□□□□□ -1.17
SNRNP40-202ENST00000373720 ZNF28P17035 718 aa7.77□□□□□ -1.17
SNRNP40-202ENST00000373720 CCL1P22362 96 aa7.77□□□□□ -1.17
SNRNP40-202ENST00000373720 S100A1P23297 94 aa7.77□□□□□ -1.17
SNRNP40-202ENST00000373720 PRSS3P35030 304 aa7.77□□□□□ -1.17
SNRNP40-202ENST00000373720 RCVRNP35243 200 aa7.77□□□□□ -1.17
SNRNP40-202ENST00000373720 KIR3DL2P43630 455 aa7.77□□□□□ -1.17
SNRNP40-202ENST00000373720 CYB561P49447 251 aa7.77□□□□□ -1.17
SNRNP40-202ENST00000373720 P2RY4P51582 365 aa7.77□□□□□ -1.17
SNRNP40-202ENST00000373720 BIDP55957 195 aa7.77□□□□□ -1.17
SNRNP40-202ENST00000373720 PCBD1P61457 104 aa7.77□□□□□ -1.17
SNRNP40-202ENST00000373720 TNK1Q13470 666 aa7.77□□□□□ -1.17
SNRNP40-202ENST00000373720 CDK10Q15131 360 aa7.77□□□□□ -1.17
SNRNP40-202ENST00000373720 KCNJ8Q15842 424 aa7.77□□□□□ -1.17
SNRNP40-202ENST00000373720 BCL2A1Q16548 175 aa7.77□□□□□ -1.17
SNRNP40-202ENST00000373720 TBRG1Q3YBR2 411 aa7.77□□□□□ -1.17
SNRNP40-202ENST00000373720 GXYLT1Q4G148 440 aa7.77□□□□□ -1.17
SNRNP40-202ENST00000373720 FAM27D1Q5T7N8 215 aa7.77□□□□□ -1.17
SNRNP40-202ENST00000373720 Q6ZSR3 168 aa7.77□□□□□ -1.17
SNRNP40-202ENST00000373720 Q7L0L9 218 aa7.77□□□□□ -1.17
SNRNP40-202ENST00000373720 FCRLAQ7L513 359 aa7.77□□□□□ -1.17
SNRNP40-202ENST00000373720 DOK3Q7L591 496 aa7.77□□□□□ -1.17
SNRNP40-202ENST00000373720 RAB11FIP2Q7L804 512 aa7.77□□□□□ -1.17
SNRNP40-202ENST00000373720 OR2W3Q7Z3T1 314 aa7.77□□□□□ -1.17
SNRNP40-202ENST00000373720 DCXRQ7Z4W1 244 aa7.77□□□□□ -1.17
SNRNP40-202ENST00000373720 DPPA2Q7Z7J5 298 aa7.77□□□□□ -1.17
SNRNP40-202ENST00000373720 NOXA1Q86UR1 476 aa7.77□□□□□ -1.17
SNRNP40-202ENST00000373720 TMPRSS12Q86WS5 348 aa7.77□□□□□ -1.17
SNRNP40-202ENST00000373720 SLC22A24Q8N4F4 322 aa7.77□□□□□ -1.17
SNRNP40-202ENST00000373720 RFLNBQ8N5W9 214 aa7.77□□□□□ -1.17
SNRNP40-202ENST00000373720 CELF2-AS1Q8N7Q2 184 aa7.77□□□□□ -1.17
SNRNP40-202ENST00000373720 OR52H1Q8NGJ2 320 aa7.77□□□□□ -1.17
SNRNP40-202ENST00000373720 PP6455Q8WZ26 134 aa7.77□□□□□ -1.17
SNRNP40-202ENST00000373720 RGP1Q92546 391 aaPredicted RBP7.77□□□□□ -1.17
SNRNP40-202ENST00000373720 FAM3DQ96BQ1 224 aa7.77□□□□□ -1.17
SNRNP40-202ENST00000373720 SLAMF6Q96DU3 332 aa7.77□□□□□ -1.17
SNRNP40-202ENST00000373720 ST6GAL2Q96JF0 529 aa7.77□□□□□ -1.17
SNRNP40-202ENST00000373720 ARL5BQ96KC2 179 aa7.77□□□□□ -1.17
SNRNP40-202ENST00000373720 ZFP3Q96NJ6 502 aa7.77□□□□□ -1.17
SNRNP40-202ENST00000373720 TECTBQ96PL2 329 aa7.77□□□□□ -1.17
SNRNP40-202ENST00000373720 NEDD4LQ96PU5 975 aa7.77□□□□□ -1.17
SNRNP40-202ENST00000373720 OR5B2Q96R09 309 aa7.77□□□□□ -1.17
SNRNP40-202ENST00000373720 MED28Q9H204 178 aa7.77□□□□□ -1.17
SNRNP40-202ENST00000373720 NELFAQ9H3P2 528 aa7.77□□□□□ -1.17
SNRNP40-202ENST00000373720 RNF122Q9H9V4 155 aa7.77□□□□□ -1.17
SNRNP40-202ENST00000373720 GALNT9Q9HCQ5 603 aa7.77□□□□□ -1.17
SNRNP40-202ENST00000373720 APMAPQ9HDC9 416 aa7.77□□□□□ -1.17
SNRNP40-202ENST00000373720 MYOZ1Q9NP98 299 aaPredicted RBP7.77□□□□□ -1.17
SNRNP40-202ENST00000373720 GLTPQ9NZD2 209 aa7.77□□□□□ -1.17
SNRNP40-202ENST00000373720 B3GAT1Q9P2W7 334 aa7.77□□□□□ -1.17
SNRNP40-202ENST00000373720 MTFP1Q9UDX5 166 aa7.77□□□□□ -1.17
SNRNP40-202ENST00000373720 OR5V1Q9UGF6 321 aa7.77□□□□□ -1.17
SNRNP40-202ENST00000373720 DKKL1Q9UK85 242 aa7.77□□□□□ -1.17
SNRNP40-202ENST00000373720 SLC22A13Q9Y226 551 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms