RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 ZNF724A8MTY0 619 aa14.52□□□□□ -0.08
COL17A1-202ENST00000369733 MCRIP1C9JLW8 97 aa14.52□□□□□ -0.08
COL17A1-202ENST00000369733 H3BNC9 293 aa14.52□□□□□ -0.08
COL17A1-202ENST00000369733 ZNF354AO60765 605 aaPredicted RBP14.52□□□□□ -0.08
COL17A1-202ENST00000369733 CTSLP07711 333 aa14.52□□□□□ -0.08
COL17A1-202ENST00000369733 RPL12P30050 165 aaKnown RBP14.52□□□□□ -0.08
COL17A1-202ENST00000369733 DUSP3P51452 185 aaPredicted RBP14.52□□□□□ -0.08
COL17A1-202ENST00000369733 TESK1Q15569 626 aa14.52□□□□□ -0.08
COL17A1-202ENST00000369733 JAM3Q9BX67 310 aa14.52□□□□□ -0.08
COL17A1-202ENST00000369733 SEMA6CQ9H3T2 930 aa14.52□□□□□ -0.08
COL17A1-202ENST00000369733 GNB3P16520 340 aa14.52□□□□□ -0.09
COL17A1-202ENST00000369733 AADACP22760 399 aa14.52□□□□□ -0.09
COL17A1-202ENST00000369733 SSBP1Q04837 148 aaKnown RBP14.52□□□□□ -0.09
COL17A1-202ENST00000369733 IKZF1Q13422 519 aa14.52□□□□□ -0.09
COL17A1-202ENST00000369733 NXPE3Q969Y0 559 aa14.52□□□□□ -0.09
COL17A1-202ENST00000369733 PCDHGA5Q9Y5G8 931 aa14.52□□□□□ -0.09
COL17A1-202ENST00000369733 ARGFXA6NJG6 315 aa14.52□□□□□ -0.09
COL17A1-202ENST00000369733 KCNE3Q9Y6H6 103 aa14.52□□□□□ -0.09
COL17A1-202ENST00000369733 TOGARAM1Q9Y4F4 1720 aa14.52□□□□□ -0.09
COL17A1-202ENST00000369733 USP54Q70EL1 1684 aa14.52□□□□□ -0.09
COL17A1-202ENST00000369733 DUSP1P28562 367 aa14.52□□□□□ -0.09
COL17A1-202ENST00000369733 C17orf67Q0P5P2 114 aa14.52□□□□□ -0.09
COL17A1-202ENST00000369733 PDLIM3Q53GG5 364 aaPredicted RBP14.52□□□□□ -0.09
COL17A1-202ENST00000369733 C11orf87Q6NUJ2 197 aa14.52□□□□□ -0.09
COL17A1-202ENST00000369733 DND1Q8IYX4 353 aaKnown RBP14.52□□□□□ -0.09
COL17A1-202ENST00000369733 BCORP1Q8N888 145 aa14.52□□□□□ -0.09
COL17A1-202ENST00000369733 MARCH1Q8TCQ1 289 aa14.52□□□□□ -0.09
COL17A1-202ENST00000369733 SLC22A13Q9Y226 551 aa14.52□□□□□ -0.09
COL17A1-202ENST00000369733 MT-ND4LP03901 98 aa14.51□□□□□ -0.09
COL17A1-202ENST00000369733 PI3P19957 117 aa14.51□□□□□ -0.09
COL17A1-202ENST00000369733 YPEL5P62699 121 aa14.51□□□□□ -0.09
COL17A1-202ENST00000369733 CCNL2Q96S94 520 aaPredicted RBP14.51□□□□□ -0.09
COL17A1-202ENST00000369733 NKX3-1Q99801 234 aaPredicted RBP14.51□□□□□ -0.09
COL17A1-202ENST00000369733 SLC6A17Q9H1V8 727 aa14.51□□□□□ -0.09
COL17A1-202ENST00000369733 LRIT1Q9P2V4 623 aa14.51□□□□□ -0.09
COL17A1-202ENST00000369733 AK3Q9UIJ7 227 aa14.51□□□□□ -0.09
COL17A1-202ENST00000369733 FOXJ3Q9UPW0 622 aa14.51□□□□□ -0.09
COL17A1-202ENST00000369733 RNF212BA8MTL3 300 aa14.51□□□□□ -0.09
COL17A1-202ENST00000369733 C17orf112F2Z3M2 114 aa14.51□□□□□ -0.09
COL17A1-202ENST00000369733 F2RL1P55085 397 aa14.51□□□□□ -0.09
COL17A1-202ENST00000369733 RPL18Q07020 188 aaKnown RBP14.51□□□□□ -0.09
COL17A1-202ENST00000369733 BAMBIQ13145 260 aa14.51□□□□□ -0.09
COL17A1-202ENST00000369733 SLC16A14Q7RTX9 510 aa14.51□□□□□ -0.09
COL17A1-202ENST00000369733 PADI1Q9ULC6 663 aa14.51□□□□□ -0.09
COL17A1-202ENST00000369733 PRRC2BQ5JSZ5 2229 aaKnown RBP14.51□□□□□ -0.09
COL17A1-202ENST00000369733 RAB4AP20338 218 aa14.51□□□□□ -0.09
COL17A1-202ENST00000369733 MVDP53602 400 aa14.51□□□□□ -0.09
COL17A1-202ENST00000369733 BAXQ07812 192 aa14.51□□□□□ -0.09
COL17A1-202ENST00000369733 BTF3L4Q96K17 158 aa14.51□□□□□ -0.09
COL17A1-202ENST00000369733 ENKD1Q9H0I2 346 aa14.51□□□□□ -0.09
COL17A1-202ENST00000369733 PIGLQ9Y2B2 252 aa14.51□□□□□ -0.09
COL17A1-202ENST00000369733 EXOGQ9Y2C4 368 aaKnown RBP14.51□□□□□ -0.09
COL17A1-202ENST00000369733 STRAPQ9Y3F4 350 aaKnown RBP14.51□□□□□ -0.09
COL17A1-202ENST00000369733 PLPP2O43688 288 aa14.51□□□□□ -0.09
COL17A1-202ENST00000369733 PTHLHP12272 177 aa14.51□□□□□ -0.09
COL17A1-202ENST00000369733 H1FNTQ75WM6 255 aaPredicted RBP14.51□□□□□ -0.09
COL17A1-202ENST00000369733 OR2G2Q8NGZ5 317 aa14.51□□□□□ -0.09
COL17A1-202ENST00000369733 FAM3CQ92520 227 aa14.51□□□□□ -0.09
COL17A1-202ENST00000369733 ZNF775Q96BV0 537 aaPredicted RBP14.51□□□□□ -0.09
COL17A1-202ENST00000369733 ZNF2Q9BSG1 426 aaPredicted RBP14.51□□□□□ -0.09
COL17A1-202ENST00000369733 RHOFQ9HBH0 211 aa14.51□□□□□ -0.09
COL17A1-202ENST00000369733 THAP10Q9P2Z0 257 aaPredicted RBP14.51□□□□□ -0.09
COL17A1-202ENST00000369733 SLC23A2Q9UGH3 650 aa14.51□□□□□ -0.09
COL17A1-202ENST00000369733 DFFBO76075 338 aa14.5□□□□□ -0.09
COL17A1-202ENST00000369733 EMDP50402 254 aa14.5□□□□□ -0.09
COL17A1-202ENST00000369733 RAB1AP62820 205 aa14.5□□□□□ -0.09
COL17A1-202ENST00000369733 ACKR1Q16570 336 aa14.5□□□□□ -0.09
COL17A1-202ENST00000369733 HAGHQ16775 308 aa14.5□□□□□ -0.09
COL17A1-202ENST00000369733 SMUG1Q53HV7 270 aa14.5□□□□□ -0.09
COL17A1-202ENST00000369733 RPUSD3Q6P087 351 aaKnown RBP14.5□□□□□ -0.09
COL17A1-202ENST00000369733 BRICD5Q6PL45 260 aa14.5□□□□□ -0.09
COL17A1-202ENST00000369733 BPHLQ86WA6 291 aaPredicted RBP14.5□□□□□ -0.09
COL17A1-202ENST00000369733 TMEM229BQ8NBD8 167 aa14.5□□□□□ -0.09
COL17A1-202ENST00000369733 A0A0A6YYD5 115 aa14.5□□□□□ -0.09
COL17A1-202ENST00000369733 HLA-HP01893 362 aa14.5□□□□□ -0.09
COL17A1-202ENST00000369733 SLC6A1P30531 599 aa14.5□□□□□ -0.09
COL17A1-202ENST00000369733 CSF2RBP32927 897 aa14.5□□□□□ -0.09
COL17A1-202ENST00000369733 ELFN2Q5R3F8 820 aa14.5□□□□□ -0.09
COL17A1-202ENST00000369733 OR51E1Q8TCB6 317 aa14.5□□□□□ -0.09
COL17A1-202ENST00000369733 ZBP1Q9H171 429 aa14.5□□□□□ -0.09
COL17A1-202ENST00000369733 OR14J1Q9UGF5 321 aa14.5□□□□□ -0.09
COL17A1-202ENST00000369733 HSPB2A8KAH6 182 aa14.5□□□□□ -0.09
COL17A1-202ENST00000369733 SDCBPO00560 298 aaPredicted RBP14.5□□□□□ -0.09
COL17A1-202ENST00000369733 CLDN1O95832 211 aa14.5□□□□□ -0.09
COL17A1-202ENST00000369733 BCKDHBP21953 392 aa14.5□□□□□ -0.09
COL17A1-202ENST00000369733 EEF1A2Q05639 463 aaKnown RBP14.5□□□□□ -0.09
COL17A1-202ENST00000369733 HSPB2Q16082 182 aa14.5□□□□□ -0.09
COL17A1-202ENST00000369733 DPPA2Q7Z7J5 298 aa14.5□□□□□ -0.09
COL17A1-202ENST00000369733 ADIPOR2Q86V24 386 aa14.5□□□□□ -0.09
COL17A1-202ENST00000369733 C9orf62Q8N4C0 152 aa14.5□□□□□ -0.09
COL17A1-202ENST00000369733 SPICQ8N5J4 248 aa14.5□□□□□ -0.09
COL17A1-202ENST00000369733 ARIH2OSQ8N7S6 290 aa14.5□□□□□ -0.09
COL17A1-202ENST00000369733 STRADBQ9C0K7 418 aa14.5□□□□□ -0.09
COL17A1-202ENST00000369733 KCNG2Q9UJ96 466 aa14.5□□□□□ -0.09
COL17A1-202ENST00000369733 FBXO4Q9UKT5 387 aa14.5□□□□□ -0.09
COL17A1-202ENST00000369733 HCFC2Q9Y5Z7 792 aa14.5□□□□□ -0.09
COL17A1-202ENST00000369733 NME1P15531 152 aaKnown RBP14.5□□□□□ -0.09
COL17A1-202ENST00000369733 POU3F2P20265 443 aaPredicted RBP14.5□□□□□ -0.09
COL17A1-202ENST00000369733 GRB2P62993 217 aaKnown RBP14.5□□□□□ -0.09
COL17A1-202ENST00000369733 SLC35A1P78382 337 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms