RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 CCNOP22674 350 aa19.29■□□□□ 0.68
ECHDC1-203ENST00000368291 SNRPD2P62316 118 aaKnown RBP19.29■□□□□ 0.68
ECHDC1-203ENST00000368291 HIST1H3AP68431 136 aa19.29■□□□□ 0.68
ECHDC1-203ENST00000368291 GLO1Q04760 184 aa19.29■□□□□ 0.68
ECHDC1-203ENST00000368291 RAB35Q15286 201 aa19.29■□□□□ 0.68
ECHDC1-203ENST00000368291 CCDC92Q53HC0 331 aaPredicted RBP19.29■□□□□ 0.68
ECHDC1-203ENST00000368291 HIST2H3PS2Q5TEC6 136 aa19.29■□□□□ 0.68
ECHDC1-203ENST00000368291 ACSM5Q6NUN0 579 aa19.29■□□□□ 0.68
ECHDC1-203ENST00000368291 HIST2H3AQ71DI3 136 aa19.29■□□□□ 0.68
ECHDC1-203ENST00000368291 VASH1Q7L8A9 365 aaPredicted RBP19.29■□□□□ 0.68
ECHDC1-203ENST00000368291 AMIGO2Q86SJ2 522 aa19.29■□□□□ 0.68
ECHDC1-203ENST00000368291 ZNF101Q8IZC7 436 aa19.29■□□□□ 0.68
ECHDC1-203ENST00000368291 CIARTQ8N365 385 aaPredicted RBP19.29■□□□□ 0.68
ECHDC1-203ENST00000368291 LRTOMTQ8WZ04 291 aa19.29■□□□□ 0.68
ECHDC1-203ENST00000368291 SORCS2Q96PQ0 1159 aa19.29■□□□□ 0.68
ECHDC1-203ENST00000368291 CMC2Q9NRP2 79 aa19.29■□□□□ 0.68
ECHDC1-203ENST00000368291 MRPL22Q9NWU5 206 aaKnown RBP19.29■□□□□ 0.68
ECHDC1-203ENST00000368291 MYEF2Q9P2K5 600 aaKnown RBP19.29■□□□□ 0.68
ECHDC1-203ENST00000368291 KLHL21Q9UJP4 597 aa19.29■□□□□ 0.68
ECHDC1-203ENST00000368291 FZR1Q9UM11 496 aa19.29■□□□□ 0.68
ECHDC1-203ENST00000368291 RER1O15258 196 aa19.28■□□□□ 0.68
ECHDC1-203ENST00000368291 ICMTO60725 284 aa19.28■□□□□ 0.68
ECHDC1-203ENST00000368291 COX5BP10606 129 aa19.28■□□□□ 0.68
ECHDC1-203ENST00000368291 FASP25445 335 aa19.28■□□□□ 0.68
ECHDC1-203ENST00000368291 PYCR1P32322 319 aa19.28■□□□□ 0.68
ECHDC1-203ENST00000368291 EVX1P49640 407 aa19.28■□□□□ 0.68
ECHDC1-203ENST00000368291 PPOXP50336 477 aa19.28■□□□□ 0.68
ECHDC1-203ENST00000368291 GDI2P50395 445 aaKnown RBP19.28■□□□□ 0.68
ECHDC1-203ENST00000368291 DAPP51397 102 aa19.28■□□□□ 0.68
ECHDC1-203ENST00000368291 ARHGDIAP52565 204 aa19.28■□□□□ 0.68
ECHDC1-203ENST00000368291 ACTR3P61158 418 aa19.28■□□□□ 0.68
ECHDC1-203ENST00000368291 RPS23P62266 143 aaKnown RBP19.28■□□□□ 0.68
ECHDC1-203ENST00000368291 TEKQ02763 1124 aa19.28■□□□□ 0.68
ECHDC1-203ENST00000368291 FAHD1Q6P587 224 aa19.28■□□□□ 0.68
ECHDC1-203ENST00000368291 OR9Q1Q8NGQ5 310 aa19.28■□□□□ 0.68
ECHDC1-203ENST00000368291 SYT3Q9BQG1 590 aa19.28■□□□□ 0.68
ECHDC1-203ENST00000368291 ZNF556Q9HAH1 456 aa19.28■□□□□ 0.68
ECHDC1-203ENST00000368291 BARX1Q9HBU1 254 aaPredicted RBP19.28■□□□□ 0.68
ECHDC1-203ENST00000368291 SYNGR3O43761 229 aa19.27■□□□□ 0.68
ECHDC1-203ENST00000368291 DOK2O60496 412 aa19.27■□□□□ 0.68
ECHDC1-203ENST00000368291 CLUP10909 449 aa19.27■□□□□ 0.68
ECHDC1-203ENST00000368291 GRK5P34947 590 aa19.27■□□□□ 0.68
ECHDC1-203ENST00000368291 RAD52P43351 418 aa19.27■□□□□ 0.68
ECHDC1-203ENST00000368291 CDK5Q00535 292 aa19.27■□□□□ 0.68
ECHDC1-203ENST00000368291 KPNB1Q14974 876 aaKnown RBP19.27■□□□□ 0.68
ECHDC1-203ENST00000368291 CLEC12BQ2HXU8 276 aa19.27■□□□□ 0.68
ECHDC1-203ENST00000368291 RGS7BPQ6MZT1 257 aaPredicted RBP19.27■□□□□ 0.68
ECHDC1-203ENST00000368291 CORO6Q6QEF8 472 aa19.27■□□□□ 0.68
ECHDC1-203ENST00000368291 LYPD4Q6UWN0 246 aa19.27■□□□□ 0.68
ECHDC1-203ENST00000368291 ZSCAN2Q7Z7L9 614 aaPredicted RBP19.27■□□□□ 0.68
ECHDC1-203ENST00000368291 ATG16L2Q8NAA4 619 aa19.27■□□□□ 0.68
ECHDC1-203ENST00000368291 BDH2Q9BUT1 245 aa19.27■□□□□ 0.68
ECHDC1-203ENST00000368291 PLEK2Q9NYT0 353 aa19.27■□□□□ 0.68
ECHDC1-203ENST00000368291 OR6C6A6NF89 314 aa19.26■□□□□ 0.67
ECHDC1-203ENST00000368291 SSX4O60224 188 aa19.26■□□□□ 0.67
ECHDC1-203ENST00000368291 LY6HO94772 140 aa19.26■□□□□ 0.67
ECHDC1-203ENST00000368291 CLPTM1O96005 669 aa19.26■□□□□ 0.67
ECHDC1-203ENST00000368291 GYPBP06028 91 aa19.26■□□□□ 0.67
ECHDC1-203ENST00000368291 ZNF250P15622 560 aa19.26■□□□□ 0.67
ECHDC1-203ENST00000368291 POU1F1P28069 291 aa19.26■□□□□ 0.67
ECHDC1-203ENST00000368291 GGT2P36268 569 aa19.26■□□□□ 0.67
ECHDC1-203ENST00000368291 SLC25A1P53007 311 aa19.26■□□□□ 0.67
ECHDC1-203ENST00000368291 TNK1Q13470 666 aa19.26■□□□□ 0.67
ECHDC1-203ENST00000368291 GINS1Q14691 196 aa19.26■□□□□ 0.67
ECHDC1-203ENST00000368291 ZCCHC24Q8N2G6 241 aaKnown RBP19.26■□□□□ 0.67
ECHDC1-203ENST00000368291 OR51L1Q8NGJ5 315 aa19.26■□□□□ 0.67
ECHDC1-203ENST00000368291 OR2T4Q8NH00 348 aa19.26■□□□□ 0.67
ECHDC1-203ENST00000368291 SLC7A6Q92536 515 aa19.26■□□□□ 0.67
ECHDC1-203ENST00000368291 HCAR1Q9BXC0 346 aa19.26■□□□□ 0.67
ECHDC1-203ENST00000368291 BCL2L14Q9BZR8 327 aa19.26■□□□□ 0.67
ECHDC1-203ENST00000368291 NDRG4Q9ULP0 352 aaKnown RBP19.26■□□□□ 0.67
ECHDC1-203ENST00000368291 POLR1DQ9Y2S0 133 aa19.26■□□□□ 0.67
ECHDC1-203ENST00000368291 YLPM1P49750 1951 aaKnown RBP19.26■□□□□ 0.67
ECHDC1-203ENST00000368291 IGLV3-9A0A075B6K5 115 aa19.25■□□□□ 0.67
ECHDC1-203ENST00000368291 NGFP01138 241 aa19.25■□□□□ 0.67
ECHDC1-203ENST00000368291 LCKP06239 509 aa19.25■□□□□ 0.67
ECHDC1-203ENST00000368291 PSKH1P11801 424 aa19.25■□□□□ 0.67
ECHDC1-203ENST00000368291 HTR5AP47898 357 aa19.25■□□□□ 0.67
ECHDC1-203ENST00000368291 EFNA4P52798 201 aa19.25■□□□□ 0.67
ECHDC1-203ENST00000368291 NUDT6P53370 316 aa19.25■□□□□ 0.67
ECHDC1-203ENST00000368291 SLC18B1Q6NT16 456 aa19.25■□□□□ 0.67
ECHDC1-203ENST00000368291 SLC27A4Q6P1M0 643 aa19.25■□□□□ 0.67
ECHDC1-203ENST00000368291 RFPL4BQ6ZWI9 263 aa19.25■□□□□ 0.67
ECHDC1-203ENST00000368291 PROKR2Q8NFJ6 384 aa19.25■□□□□ 0.67
ECHDC1-203ENST00000368291 OR1J1Q8NGS3 322 aa19.25■□□□□ 0.67
ECHDC1-203ENST00000368291 PYDC1Q8WXC3 89 aa19.25■□□□□ 0.67
ECHDC1-203ENST00000368291 C4orf45Q96LM5 186 aa19.25■□□□□ 0.67
ECHDC1-203ENST00000368291 VRK1Q99986 396 aaPredicted RBP19.25■□□□□ 0.67
ECHDC1-203ENST00000368291 CYB5R1Q9UHQ9 305 aa19.25■□□□□ 0.67
ECHDC1-203ENST00000368291 RIIAD1A6NNX1 92 aa19.24■□□□□ 0.67
ECHDC1-203ENST00000368291 G3V2T6 193 aa19.24■□□□□ 0.67
ECHDC1-203ENST00000368291 H3BNX3 289 aa19.24■□□□□ 0.67
ECHDC1-203ENST00000368291 H7C1Q1 480 aa19.24■□□□□ 0.67
ECHDC1-203ENST00000368291 F12P00748 615 aaPredicted RBP19.24■□□□□ 0.67
ECHDC1-203ENST00000368291 HLA-DQA2P01906 255 aa19.24■□□□□ 0.67
ECHDC1-203ENST00000368291 FCGR1AP12314 374 aa19.24■□□□□ 0.67
ECHDC1-203ENST00000368291 FOSL1P15407 271 aa19.24■□□□□ 0.67
ECHDC1-203ENST00000368291 SPI1P17947 270 aa19.24■□□□□ 0.67
ECHDC1-203ENST00000368291 TMEM255AQ5JRV8 349 aa19.24■□□□□ 0.67
ECHDC1-203ENST00000368291 LINC01590Q5TEZ4 76 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms