RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 KLF2Q9Y5W3 355 aaPredicted RBP10.38□□□□□ -0.75
USF1-201ENST00000368019 TMEM14AQ9Y6G1 99 aa10.38□□□□□ -0.75
USF1-201ENST00000368019 SEC16AO15027 2179 aa10.38□□□□□ -0.75
USF1-201ENST00000368019 TNRC6AQ8NDV7 1962 aaKnown RBP10.37□□□□□ -0.75
USF1-201ENST00000368019 SPTBP11277 2137 aa10.37□□□□□ -0.75
USF1-201ENST00000368019 A0A1W2PPK0 400 aa10.37□□□□□ -0.75
USF1-201ENST00000368019 GGT3PA6NGU5 568 aa10.37□□□□□ -0.75
USF1-201ENST00000368019 ATP6V1G2-DDX39BF2Z307 99 aa10.37□□□□□ -0.75
USF1-201ENST00000368019 TOX3O15405 576 aaPredicted RBP10.37□□□□□ -0.75
USF1-201ENST00000368019 ARPC5O15511 151 aa10.37□□□□□ -0.75
USF1-201ENST00000368019 FGF17O60258 216 aa10.37□□□□□ -0.75
USF1-201ENST00000368019 CDC40O60508 579 aaKnown RBP eCLIP10.37□□□□□ -0.75
USF1-201ENST00000368019 SELENOFO60613 162 aa10.37□□□□□ -0.75
USF1-201ENST00000368019 SRPX2O60687 465 aaPredicted RBP10.37□□□□□ -0.75
USF1-201ENST00000368019 CDC123O75794 336 aaPredicted RBP10.37□□□□□ -0.75
USF1-201ENST00000368019 OR2F2O95006 317 aa10.37□□□□□ -0.75
USF1-201ENST00000368019 CBX7O95931 251 aa10.37□□□□□ -0.75
USF1-201ENST00000368019 NGFRP08138 427 aa10.37□□□□□ -0.75
USF1-201ENST00000368019 H2AFB1P0C5Y9 115 aa10.37□□□□□ -0.75
USF1-201ENST00000368019 ZNF28P17035 718 aa10.37□□□□□ -0.75
USF1-201ENST00000368019 HLA-GP17693 338 aa10.37□□□□□ -0.75
USF1-201ENST00000368019 TCN2P20062 427 aa10.37□□□□□ -0.75
USF1-201ENST00000368019 PSMB10P40306 273 aa10.37□□□□□ -0.75
USF1-201ENST00000368019 ADH7P40394 386 aa10.37□□□□□ -0.75
USF1-201ENST00000368019 PPM1FP49593 454 aaPredicted RBP10.37□□□□□ -0.75
USF1-201ENST00000368019 NANOS3P60323 173 aaKnown RBP10.37□□□□□ -0.75
USF1-201ENST00000368019 BTN1A1Q13410 526 aa10.37□□□□□ -0.75
USF1-201ENST00000368019 OR2F1Q13607 317 aa10.37□□□□□ -0.75
USF1-201ENST00000368019 DEFB134Q4QY38 66 aa10.37□□□□□ -0.75
USF1-201ENST00000368019 CLVS2Q5SYC1 327 aa10.37□□□□□ -0.75
USF1-201ENST00000368019 ATP1A1-AS1Q5TC04 95 aa10.37□□□□□ -0.75
USF1-201ENST00000368019 FCRLBQ6BAA4 426 aa10.37□□□□□ -0.75
USF1-201ENST00000368019 CDC20BQ86Y33 519 aa10.37□□□□□ -0.75
USF1-201ENST00000368019 ZNF433Q8N7K0 673 aaPredicted RBP10.37□□□□□ -0.75
USF1-201ENST00000368019 ZNF454Q8N9F8 522 aa10.37□□□□□ -0.75
USF1-201ENST00000368019 TMEM229BQ8NBD8 167 aa10.37□□□□□ -0.75
USF1-201ENST00000368019 ADAMTS18Q8TE60 1221 aa10.37□□□□□ -0.75
USF1-201ENST00000368019 ZFYVE21Q9BQ24 234 aa10.37□□□□□ -0.75
USF1-201ENST00000368019 GINS4Q9BRT9 223 aa10.37□□□□□ -0.75
USF1-201ENST00000368019 POTEKPQ9BYX7 375 aa10.37□□□□□ -0.75
USF1-201ENST00000368019 EXOSC3Q9NQT5 275 aaKnown RBP10.37□□□□□ -0.75
USF1-201ENST00000368019 FBXO34Q9NWN3 711 aa10.37□□□□□ -0.75
USF1-201ENST00000368019 RASL12Q9NYN1 266 aa10.37□□□□□ -0.75
USF1-201ENST00000368019 MRPL15Q9P015 296 aaKnown RBP10.37□□□□□ -0.75
USF1-201ENST00000368019 MRPS18BQ9Y676 258 aaKnown RBP10.37□□□□□ -0.75
USF1-201ENST00000368019 NPIPA5A0A0B4J1W7 369 aa10.36□□□□□ -0.75
USF1-201ENST00000368019 A0A1B0GTI1 187 aa10.36□□□□□ -0.75
USF1-201ENST00000368019 OR6C68A6NDL8 312 aa10.36□□□□□ -0.75
USF1-201ENST00000368019 TMEM200CA6NKL6 621 aa10.36□□□□□ -0.75
USF1-201ENST00000368019 OR52A4PA6NMU1 304 aa10.36□□□□□ -0.75
USF1-201ENST00000368019 ANXA2P2A6NMY6 339 aa10.36□□□□□ -0.75
USF1-201ENST00000368019 OR4C45A6NMZ5 311 aa10.36□□□□□ -0.75
USF1-201ENST00000368019 NUDT19A8MXV4 375 aa10.36□□□□□ -0.75
USF1-201ENST00000368019 NPIPA7E9PJI5 369 aa10.36□□□□□ -0.75
USF1-201ENST00000368019 TEX46H3BTG2 121 aa10.36□□□□□ -0.75
USF1-201ENST00000368019 K7EM74 188 aa10.36□□□□□ -0.75
USF1-201ENST00000368019 P2RX6O15547 441 aa10.36□□□□□ -0.75
USF1-201ENST00000368019 ANXA2P07355 339 aaKnown RBP10.36□□□□□ -0.75
USF1-201ENST00000368019 CD14P08571 375 aa10.36□□□□□ -0.75
USF1-201ENST00000368019 NPIPA8P0DM63 369 aa10.36□□□□□ -0.75
USF1-201ENST00000368019 PNMTP11086 282 aa10.36□□□□□ -0.75
USF1-201ENST00000368019 ZNF35P13682 527 aa10.36□□□□□ -0.75
USF1-201ENST00000368019 ADRA2CP18825 462 aa10.36□□□□□ -0.75
USF1-201ENST00000368019 MPZP25189 248 aa10.36□□□□□ -0.75
USF1-201ENST00000368019 RPL4P36578 427 aaKnown RBP10.36□□□□□ -0.75
USF1-201ENST00000368019 EMDP50402 254 aa10.36□□□□□ -0.75
USF1-201ENST00000368019 TAS2R19P59542 299 aa10.36□□□□□ -0.75
USF1-201ENST00000368019 PSG6Q00889 435 aa10.36□□□□□ -0.75
USF1-201ENST00000368019 IL11RAQ14626 422 aa10.36□□□□□ -0.75
USF1-201ENST00000368019 PCGF3Q3KNV8 242 aa10.36□□□□□ -0.75
USF1-201ENST00000368019 FIGNL1Q6PIW4 674 aa10.36□□□□□ -0.75
USF1-201ENST00000368019 FIGLAQ6QHK4 219 aa10.36□□□□□ -0.75
USF1-201ENST00000368019 KIRREL2Q6UWL6 708 aa10.36□□□□□ -0.75
USF1-201ENST00000368019 MOB3CQ70IA8 216 aa10.36□□□□□ -0.75
USF1-201ENST00000368019 FAM122BQ7Z309 247 aa10.36□□□□□ -0.75
USF1-201ENST00000368019 CA13Q8N1Q1 262 aa10.36□□□□□ -0.75
USF1-201ENST00000368019 KCNRGQ8N5I3 272 aa10.36□□□□□ -0.75
USF1-201ENST00000368019 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.36□□□□□ -0.75
USF1-201ENST00000368019 CLRN3Q8NCR9 226 aa10.36□□□□□ -0.75
USF1-201ENST00000368019 PXT1Q8NFP0 134 aa10.36□□□□□ -0.75
USF1-201ENST00000368019 COQ8AQ8NI60 647 aa10.36□□□□□ -0.75
USF1-201ENST00000368019 GPX8Q8TED1 209 aa10.36□□□□□ -0.75
USF1-201ENST00000368019 MCHR2Q969V1 340 aa10.36□□□□□ -0.75
USF1-201ENST00000368019 MFFQ9GZY8 342 aa10.36□□□□□ -0.75
USF1-201ENST00000368019 SRMSQ9H3Y6 488 aa10.36□□□□□ -0.75
USF1-201ENST00000368019 ZNF768Q9H5H4 540 aaKnown RBP10.36□□□□□ -0.75
USF1-201ENST00000368019 PRELID3BQ9Y3B1 194 aa10.36□□□□□ -0.75
USF1-201ENST00000368019 HRH3Q9Y5N1 445 aa10.36□□□□□ -0.75
USF1-201ENST00000368019 SHANK1Q9Y566 2161 aa10.36□□□□□ -0.75
USF1-201ENST00000368019 SPENQ96T58 3664 aaKnown RBP10.36□□□□□ -0.75
USF1-201ENST00000368019 RAB19A4D1S5 217 aa10.35□□□□□ -0.75
USF1-201ENST00000368019 SLC17A2O00624 439 aa10.35□□□□□ -0.75
USF1-201ENST00000368019 CTAG2O75638 210 aa10.35□□□□□ -0.75
USF1-201ENST00000368019 FGF5P12034 268 aa10.35□□□□□ -0.75
USF1-201ENST00000368019 GP1BBP13224 206 aa10.35□□□□□ -0.75
USF1-201ENST00000368019 FSTP19883 344 aa10.35□□□□□ -0.75
USF1-201ENST00000368019 PTNP21246 168 aa10.35□□□□□ -0.75
USF1-201ENST00000368019 SDHAP31040 664 aa10.35□□□□□ -0.75
USF1-201ENST00000368019 PRSS3P35030 304 aa10.35□□□□□ -0.75
USF1-201ENST00000368019 DLSTP36957 453 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms