RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 ESCO2Q56NI9 601 aa17.74■□□□□ 0.43
CD47-202ENST00000361309 IGFN1Q86VF2 1251 aa17.74■□□□□ 0.43
CD47-202ENST00000361309 FNDC8Q8TC99 324 aa17.74■□□□□ 0.43
CD47-202ENST00000361309 ITLN1Q8WWA0 313 aa17.74■□□□□ 0.43
CD47-202ENST00000361309 THOC1Q96FV9 657 aaKnown RBP17.74■□□□□ 0.43
CD47-202ENST00000361309 MAN2C1Q9NTJ4 1040 aa17.74■□□□□ 0.43
CD47-202ENST00000361309 OR5V1Q9UGF6 321 aa17.74■□□□□ 0.43
CD47-202ENST00000361309 BAG5Q9UL15 447 aa17.74■□□□□ 0.43
CD47-202ENST00000361309 NDRG4Q9ULP0 352 aaKnown RBP17.74■□□□□ 0.43
CD47-202ENST00000361309 PPP1R3CQ9UQK1 317 aa17.74■□□□□ 0.43
CD47-202ENST00000361309 SOX21Q9Y651 276 aaPredicted RBP17.74■□□□□ 0.43
CD47-202ENST00000361309 NOTCH1P46531 2555 aa17.74■□□□□ 0.43
CD47-202ENST00000361309 IGHV3OR16-10A0A075B7F0 116 aa17.73■□□□□ 0.43
CD47-202ENST00000361309 CLDN34H7C241 214 aa17.73■□□□□ 0.43
CD47-202ENST00000361309 SCG5P05408 212 aa17.73■□□□□ 0.43
CD47-202ENST00000361309 IGHV4-38-2P0DP08 117 aa17.73■□□□□ 0.43
CD47-202ENST00000361309 MSR1P21757 451 aa17.73■□□□□ 0.43
CD47-202ENST00000361309 CD80P33681 288 aa17.73■□□□□ 0.43
CD47-202ENST00000361309 OR1E2P47887 323 aa17.73■□□□□ 0.43
CD47-202ENST00000361309 CTXN1P60606 82 aa17.73■□□□□ 0.43
CD47-202ENST00000361309 PAX8Q06710 450 aa17.73■□□□□ 0.43
CD47-202ENST00000361309 LEG1Q6P5S2 330 aa17.73■□□□□ 0.43
CD47-202ENST00000361309 JAZF1Q86VZ6 243 aa17.73■□□□□ 0.43
CD47-202ENST00000361309 NPEPL1Q8NDH3 523 aa17.73■□□□□ 0.43
CD47-202ENST00000361309 OR52E2Q8NGJ4 325 aa17.73■□□□□ 0.43
CD47-202ENST00000361309 TBCCD1Q9NVR7 557 aa17.73■□□□□ 0.43
CD47-202ENST00000361309 IL19Q9UHD0 177 aa17.73■□□□□ 0.43
CD47-202ENST00000361309 WNK1Q9H4A3 2382 aa17.72■□□□□ 0.43
CD47-202ENST00000361309 C12orf71A8MTZ7 269 aa17.72■□□□□ 0.43
CD47-202ENST00000361309 GPANK1O95872 356 aa17.72■□□□□ 0.43
CD47-202ENST00000361309 KITLGP21583 273 aa17.72■□□□□ 0.43
CD47-202ENST00000361309 MDH2P40926 338 aaKnown RBP17.72■□□□□ 0.43
CD47-202ENST00000361309 AGBL2Q5U5Z8 902 aa17.72■□□□□ 0.43
CD47-202ENST00000361309 SYT9Q86SS6 491 aa17.72■□□□□ 0.43
CD47-202ENST00000361309 PARP8Q8N3A8 854 aa17.72■□□□□ 0.43
CD47-202ENST00000361309 LRRC75AQ8NAA5 344 aa17.72■□□□□ 0.43
CD47-202ENST00000361309 TSPEARQ8WU66 669 aa17.72■□□□□ 0.43
CD47-202ENST00000361309 CMBLQ96DG6 245 aa17.72■□□□□ 0.43
CD47-202ENST00000361309 BPIFA2Q96DR5 249 aa17.72■□□□□ 0.43
CD47-202ENST00000361309 OR2V2Q96R30 315 aa17.72■□□□□ 0.43
CD47-202ENST00000361309 SLITRK2Q9H156 845 aa17.72■□□□□ 0.43
CD47-202ENST00000361309 EMC7Q9NPA0 242 aa17.72■□□□□ 0.43
CD47-202ENST00000361309 POLE4Q9NR33 117 aa17.72■□□□□ 0.43
CD47-202ENST00000361309 STARD10Q9Y365 291 aa17.72■□□□□ 0.43
CD47-202ENST00000361309 CEACAM18A8MTB9 384 aa17.71■□□□□ 0.43
CD47-202ENST00000361309 TMEM178BH3BS89 294 aa17.71■□□□□ 0.43
CD47-202ENST00000361309 COX5BP10606 129 aa17.71■□□□□ 0.43
CD47-202ENST00000361309 THRBP10828 461 aa17.71■□□□□ 0.43
CD47-202ENST00000361309 IFI30P13284 250 aa17.71■□□□□ 0.43
CD47-202ENST00000361309 MDKP21741 143 aaPredicted RBP17.71■□□□□ 0.43
CD47-202ENST00000361309 HTR5AP47898 357 aa17.71■□□□□ 0.43
CD47-202ENST00000361309 MTNR1AP48039 350 aa17.71■□□□□ 0.43
CD47-202ENST00000361309 MIDNQ504T8 468 aa17.71■□□□□ 0.43
CD47-202ENST00000361309 RABL3Q5HYI8 236 aa17.71■□□□□ 0.43
CD47-202ENST00000361309 FAM205BPQ63HN1 556 aa17.71■□□□□ 0.43
CD47-202ENST00000361309 NANOGP8Q6NSW7 305 aa17.71■□□□□ 0.43
CD47-202ENST00000361309 CALHM3Q86XJ0 350 aa17.71■□□□□ 0.43
CD47-202ENST00000361309 LRCH1Q9Y2L9 728 aa17.71■□□□□ 0.43
CD47-202ENST00000361309 A6NIZ1 184 aa17.7■□□□□ 0.42
CD47-202ENST00000361309 SURF4O15260 269 aa17.7■□□□□ 0.42
CD47-202ENST00000361309 DOK2O60496 412 aa17.7■□□□□ 0.42
CD47-202ENST00000361309 WNT2P09544 360 aa17.7■□□□□ 0.42
CD47-202ENST00000361309 TUBG1P23258 451 aa17.7■□□□□ 0.42
CD47-202ENST00000361309 OMGP23515 440 aa17.7■□□□□ 0.42
CD47-202ENST00000361309 ERFP50548 548 aa17.7■□□□□ 0.42
CD47-202ENST00000361309 RAP1BP61224 184 aa17.7■□□□□ 0.42
CD47-202ENST00000361309 RAP1AP62834 184 aa17.7■□□□□ 0.42
CD47-202ENST00000361309 PAX2Q02962 417 aa17.7■□□□□ 0.42
CD47-202ENST00000361309 C9orf139Q6ZV77 190 aa17.7■□□□□ 0.42
CD47-202ENST00000361309 MICU2Q8IYU8 434 aa17.7■□□□□ 0.42
CD47-202ENST00000361309 MUC20Q8N307 709 aaPredicted RBP17.7■□□□□ 0.42
CD47-202ENST00000361309 OR51A7Q8NH64 312 aa17.7■□□□□ 0.42
CD47-202ENST00000361309 DYDC1Q8WWB3 177 aa17.7■□□□□ 0.42
CD47-202ENST00000361309 STON2Q8WXE9 905 aa17.7■□□□□ 0.42
CD47-202ENST00000361309 HAVCR1Q96D42 359 aa17.7■□□□□ 0.42
CD47-202ENST00000361309 SSBP3Q9BWW4 388 aaPredicted RBP17.7■□□□□ 0.42
CD47-202ENST00000361309 GCM1Q9NP62 436 aa17.7■□□□□ 0.42
CD47-202ENST00000361309 TUBG2Q9NRH3 451 aa17.7■□□□□ 0.42
CD47-202ENST00000361309 IL20RAQ9UHF4 553 aa17.7■□□□□ 0.42
CD47-202ENST00000361309 TRAV27A0A087WT01 109 aa17.69■□□□□ 0.42
CD47-202ENST00000361309 MDFIC2A0A1B0GVS7 189 aa17.69■□□□□ 0.42
CD47-202ENST00000361309 H7C1C5 153 aa17.69■□□□□ 0.42
CD47-202ENST00000361309 FBP2O00757 339 aa17.69■□□□□ 0.42
CD47-202ENST00000361309 ZNF205O95201 554 aa17.69■□□□□ 0.42
CD47-202ENST00000361309 MMP16P51512 607 aa17.69■□□□□ 0.42
CD47-202ENST00000361309 LCN6P62502 163 aa17.69■□□□□ 0.42
CD47-202ENST00000361309 CYLC2Q14093 348 aaPredicted RBP17.69■□□□□ 0.42
CD47-202ENST00000361309 BEND6Q5SZJ8 279 aaPredicted RBP17.69■□□□□ 0.42
CD47-202ENST00000361309 ZNF420Q8TAQ5 688 aaPredicted RBP17.69■□□□□ 0.42
CD47-202ENST00000361309 TMIGD2Q96BF3 282 aa17.69■□□□□ 0.42
CD47-202ENST00000361309 ECSITQ9BQ95 431 aa17.69■□□□□ 0.42
CD47-202ENST00000361309 WACQ9BTA9 647 aa17.69■□□□□ 0.42
CD47-202ENST00000361309 SGCEO43556 437 aa17.68■□□□□ 0.42
CD47-202ENST00000361309 PLATP00750 562 aa17.68■□□□□ 0.42
CD47-202ENST00000361309 IFNA14P01570 189 aa17.68■□□□□ 0.42
CD47-202ENST00000361309 PPIAL4GP0DN37 164 aa17.68■□□□□ 0.42
CD47-202ENST00000361309 RPS2P15880 293 aaKnown RBP17.68■□□□□ 0.42
CD47-202ENST00000361309 FUT4P22083 530 aa17.68■□□□□ 0.42
CD47-202ENST00000361309 SCRN3Q0VDG4 424 aa17.68■□□□□ 0.42
CD47-202ENST00000361309 ST3GAL3Q11203 375 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms