RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 GPR12P47775 334 aa18.48■□□□□ 0.55
CDC42BPB-201ENST00000361246 MLLT11Q13015 90 aaPredicted RBP18.48■□□□□ 0.55
CDC42BPB-201ENST00000361246 CATSPERDQ86XM0 798 aa18.48■□□□□ 0.55
CDC42BPB-201ENST00000361246 DHRS4Q9BTZ2 278 aa18.48■□□□□ 0.55
CDC42BPB-201ENST00000361246 ZNF391Q9UJN7 358 aa18.48■□□□□ 0.55
CDC42BPB-201ENST00000361246 ZNF74Q16587 644 aa18.48■□□□□ 0.55
CDC42BPB-201ENST00000361246 OR10AD1Q8NGE0 317 aa18.48■□□□□ 0.55
CDC42BPB-201ENST00000361246 STACQ99469 402 aa18.48■□□□□ 0.55
CDC42BPB-201ENST00000361246 ANKRD60Q9BZ19 345 aa18.48■□□□□ 0.55
CDC42BPB-201ENST00000361246 PLK3Q9H4B4 646 aa18.48■□□□□ 0.55
CDC42BPB-201ENST00000361246 OCEL1Q9H607 264 aa18.48■□□□□ 0.55
CDC42BPB-201ENST00000361246 KCNG2Q9UJ96 466 aa18.48■□□□□ 0.55
CDC42BPB-201ENST00000361246 FITM1A5D6W6 292 aa18.48■□□□□ 0.55
CDC42BPB-201ENST00000361246 CCL2P13500 99 aa18.48■□□□□ 0.55
CDC42BPB-201ENST00000361246 MORN4Q8NDC4 146 aa18.48■□□□□ 0.55
CDC42BPB-201ENST00000361246 LAMB1P07942 1786 aa18.48■□□□□ 0.55
CDC42BPB-201ENST00000361246 TNRC6CQ9HCJ0 1690 aaKnown RBP18.48■□□□□ 0.55
CDC42BPB-201ENST00000361246 HYAL3O43820 417 aaPredicted RBP18.47■□□□□ 0.55
CDC42BPB-201ENST00000361246 M6PRP20645 277 aa18.47■□□□□ 0.55
CDC42BPB-201ENST00000361246 MLF1P58340 268 aa18.47■□□□□ 0.55
CDC42BPB-201ENST00000361246 HINT3Q9NQE9 182 aaKnown RBP18.47■□□□□ 0.55
CDC42BPB-201ENST00000361246 RABL2AQ9UBK7 228 aaPredicted RBP18.47■□□□□ 0.55
CDC42BPB-201ENST00000361246 RABL2BQ9UNT1 228 aa18.47■□□□□ 0.55
CDC42BPB-201ENST00000361246 ASB1Q9Y576 335 aa18.47■□□□□ 0.55
CDC42BPB-201ENST00000361246 GLCEO94923 617 aa18.47■□□□□ 0.55
CDC42BPB-201ENST00000361246 CXCL10P02778 98 aa18.47■□□□□ 0.55
CDC42BPB-201ENST00000361246 FOXF1Q12946 379 aa18.47■□□□□ 0.55
CDC42BPB-201ENST00000361246 T-ENOLP0DO92 83 aa18.47■□□□□ 0.55
CDC42BPB-201ENST00000361246 ACKR1Q16570 336 aa18.47■□□□□ 0.55
CDC42BPB-201ENST00000361246 CTDSP2O14595 271 aa18.47■□□□□ 0.55
CDC42BPB-201ENST00000361246 CCSO14618 274 aa18.47■□□□□ 0.55
CDC42BPB-201ENST00000361246 SRMP19623 302 aa18.47■□□□□ 0.55
CDC42BPB-201ENST00000361246 TNFSF8P32971 234 aa18.47■□□□□ 0.55
CDC42BPB-201ENST00000361246 THNSL2Q86YJ6 484 aa18.47■□□□□ 0.55
CDC42BPB-201ENST00000361246 CCL17Q92583 94 aa18.47■□□□□ 0.55
CDC42BPB-201ENST00000361246 OR2B2Q9GZK3 357 aa18.47■□□□□ 0.55
CDC42BPB-201ENST00000361246 UNKLQ9H9P5 680 aaKnown RBP18.47■□□□□ 0.55
CDC42BPB-201ENST00000361246 PURGQ9UJV8 347 aaKnown RBP18.47■□□□□ 0.55
CDC42BPB-201ENST00000361246 SH2D7A6NKC9 451 aaPredicted RBP18.47■□□□□ 0.55
CDC42BPB-201ENST00000361246 OLFM2O95897 454 aa18.47■□□□□ 0.55
CDC42BPB-201ENST00000361246 S100A7P31151 101 aa18.47■□□□□ 0.55
CDC42BPB-201ENST00000361246 HAAOP46952 286 aa18.47■□□□□ 0.55
CDC42BPB-201ENST00000361246 CCR6P51684 374 aa18.47■□□□□ 0.55
CDC42BPB-201ENST00000361246 YIF1BQ5BJH7 314 aa18.47■□□□□ 0.55
CDC42BPB-201ENST00000361246 KCNG3Q8TAE7 436 aa18.47■□□□□ 0.55
CDC42BPB-201ENST00000361246 PLSCR3Q9NRY6 295 aa18.47■□□□□ 0.55
CDC42BPB-201ENST00000361246 SSC5DA1L4H1 1573 aa18.47■□□□□ 0.55
CDC42BPB-201ENST00000361246 SMCHD1A6NHR9 2005 aa18.47■□□□□ 0.55
CDC42BPB-201ENST00000361246 IGHV5-51A0A0C4DH38 117 aa18.47■□□□□ 0.55
CDC42BPB-201ENST00000361246 CPEP16870 476 aa18.47■□□□□ 0.55
CDC42BPB-201ENST00000361246 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.47■□□□□ 0.55
CDC42BPB-201ENST00000361246 ZNF626Q68DY1 528 aa18.47■□□□□ 0.55
CDC42BPB-201ENST00000361246 RETREG3Q86VR2 466 aa18.47■□□□□ 0.55
CDC42BPB-201ENST00000361246 EXO1Q9UQ84 846 aaKnown RBP18.47■□□□□ 0.55
CDC42BPB-201ENST00000361246 SPRY1O43609 319 aaPredicted RBP18.46■□□□□ 0.55
CDC42BPB-201ENST00000361246 FADS1O60427 444 aa18.46■□□□□ 0.55
CDC42BPB-201ENST00000361246 RAC1P63000 192 aa18.46■□□□□ 0.55
CDC42BPB-201ENST00000361246 ZNF169Q14929 603 aaPredicted RBP18.46■□□□□ 0.55
CDC42BPB-201ENST00000361246 LRFN5Q96NI6 719 aa18.46■□□□□ 0.55
CDC42BPB-201ENST00000361246 IP6K3Q96PC2 410 aa18.46■□□□□ 0.55
CDC42BPB-201ENST00000361246 GPR55Q9Y2T6 319 aaPredicted RBP18.46■□□□□ 0.55
CDC42BPB-201ENST00000361246 ASCC3Q8N3C0 2202 aaKnown RBP18.46■□□□□ 0.55
CDC42BPB-201ENST00000361246 H0YIG0 161 aa18.46■□□□□ 0.55
CDC42BPB-201ENST00000361246 IGHV3-13P01766 116 aa18.46■□□□□ 0.55
CDC42BPB-201ENST00000361246 IGHV3-7P01780 117 aa18.46■□□□□ 0.55
CDC42BPB-201ENST00000361246 LAIR1Q6GTX8 287 aa18.46■□□□□ 0.55
CDC42BPB-201ENST00000361246 LRRC28Q86X40 367 aaPredicted RBP18.46■□□□□ 0.55
CDC42BPB-201ENST00000361246 PARP16Q8N5Y8 322 aa18.46■□□□□ 0.55
CDC42BPB-201ENST00000361246 FAM3DQ96BQ1 224 aa18.46■□□□□ 0.55
CDC42BPB-201ENST00000361246 TOX4O94842 621 aa18.46■□□□□ 0.55
CDC42BPB-201ENST00000361246 ENTHD1Q8IYW4 607 aa18.46■□□□□ 0.55
CDC42BPB-201ENST00000361246 UBTD2Q8WUN7 234 aa18.46■□□□□ 0.55
CDC42BPB-201ENST00000361246 OR5M11Q96RB7 305 aa18.46■□□□□ 0.55
CDC42BPB-201ENST00000361246 NHSQ6T4R5 1651 aa18.46■□□□□ 0.55
CDC42BPB-201ENST00000361246 LYZL6O75951 148 aa18.46■□□□□ 0.55
CDC42BPB-201ENST00000361246 MMP11P24347 488 aa18.46■□□□□ 0.55
CDC42BPB-201ENST00000361246 DPTQ07507 201 aa18.46■□□□□ 0.55
CDC42BPB-201ENST00000361246 PLXDC2Q6UX71 529 aa18.46■□□□□ 0.55
CDC42BPB-201ENST00000361246 NAA50Q9GZZ1 169 aaKnown RBP18.46■□□□□ 0.55
CDC42BPB-201ENST00000361246 MRPL22Q9NWU5 206 aaKnown RBP18.46■□□□□ 0.55
CDC42BPB-201ENST00000361246 TEX51A0A1B0GUA7 166 aa18.46■□□□□ 0.55
CDC42BPB-201ENST00000361246 BHLHE40O14503 412 aa18.46■□□□□ 0.55
CDC42BPB-201ENST00000361246 SBK2P0C263 348 aa18.46■□□□□ 0.55
CDC42BPB-201ENST00000361246 MRPL19P49406 292 aaKnown RBP18.46■□□□□ 0.55
CDC42BPB-201ENST00000361246 OR10G3Q8NGC4 313 aa18.46■□□□□ 0.55
CDC42BPB-201ENST00000361246 ZNF419Q96HQ0 510 aaPredicted RBP18.46■□□□□ 0.55
CDC42BPB-201ENST00000361246 SLC39A9Q9NUM3 307 aa18.46■□□□□ 0.55
CDC42BPB-201ENST00000361246 CLEC5AQ9NY25 188 aa18.46■□□□□ 0.55
CDC42BPB-201ENST00000361246 CD300AQ9UGN4 299 aa18.46■□□□□ 0.55
CDC42BPB-201ENST00000361246 SLC22A23A1A5C7 686 aa18.45■□□□□ 0.54
CDC42BPB-201ENST00000361246 TRAF3IP2O43734 574 aaPredicted RBP18.45■□□□□ 0.54
CDC42BPB-201ENST00000361246 OR10V1Q8NGI7 309 aa18.45■□□□□ 0.54
CDC42BPB-201ENST00000361246 UHRF2Q96PU4 802 aa18.45■□□□□ 0.54
CDC42BPB-201ENST00000361246 SOX15O60248 233 aa18.45■□□□□ 0.54
CDC42BPB-201ENST00000361246 EIF4E2O60573 245 aaKnown RBP18.45■□□□□ 0.54
CDC42BPB-201ENST00000361246 NRASP01111 189 aa18.45■□□□□ 0.54
CDC42BPB-201ENST00000361246 HTR1FP30939 366 aa18.45■□□□□ 0.54
CDC42BPB-201ENST00000361246 OPRM1P35372 400 aa18.45■□□□□ 0.54
CDC42BPB-201ENST00000361246 UBE2IP63279 158 aaKnown RBP18.45■□□□□ 0.54
CDC42BPB-201ENST00000361246 EXOSC2Q13868 293 aaKnown RBP18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms