RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 PIGQQ9BRB3 760 aa11.76□□□□□ -0.53
SQSTM1-201ENST00000360718 PLEKHA1Q9HB21 404 aa11.76□□□□□ -0.53
SQSTM1-201ENST00000360718 ELF5Q9UKW6 265 aaPredicted RBP11.76□□□□□ -0.53
SQSTM1-201ENST00000360718 ZNF281Q9Y2X9 895 aa11.76□□□□□ -0.53
SQSTM1-201ENST00000360718 FTCDNL1E5RQL4 147 aa11.75□□□□□ -0.53
SQSTM1-201ENST00000360718 C11orf98E9PRG8 122 aa11.75□□□□□ -0.53
SQSTM1-201ENST00000360718 SULT1B1O43704 296 aa11.75□□□□□ -0.53
SQSTM1-201ENST00000360718 TACSTD2P09758 323 aa11.75□□□□□ -0.53
SQSTM1-201ENST00000360718 RFPL3SP0C7P2 107 aa11.75□□□□□ -0.53
SQSTM1-201ENST00000360718 SULT1A3P0DMM9 295 aa11.75□□□□□ -0.53
SQSTM1-201ENST00000360718 SULT1A4P0DMN0 295 aa11.75□□□□□ -0.53
SQSTM1-201ENST00000360718 M6PRP20645 277 aa11.75□□□□□ -0.53
SQSTM1-201ENST00000360718 SDHAP31040 664 aa11.75□□□□□ -0.53
SQSTM1-201ENST00000360718 GDNFP39905 211 aa11.75□□□□□ -0.53
SQSTM1-201ENST00000360718 CCL11P51671 97 aa11.75□□□□□ -0.53
SQSTM1-201ENST00000360718 MFAP5Q13361 173 aa11.75□□□□□ -0.53
SQSTM1-201ENST00000360718 TEX261Q6UWH6 196 aa11.75□□□□□ -0.53
SQSTM1-201ENST00000360718 KCTD20Q7Z5Y7 419 aa11.75□□□□□ -0.53
SQSTM1-201ENST00000360718 RFLNBQ8N5W9 214 aa11.75□□□□□ -0.53
SQSTM1-201ENST00000360718 LRRC75AQ8NAA5 344 aa11.75□□□□□ -0.53
SQSTM1-201ENST00000360718 OR51L1Q8NGJ5 315 aa11.75□□□□□ -0.53
SQSTM1-201ENST00000360718 OR14L1PQ8NHC6 308 aa11.75□□□□□ -0.53
SQSTM1-201ENST00000360718 ZNF417Q8TAU3 575 aa11.75□□□□□ -0.53
SQSTM1-201ENST00000360718 SUN5Q8TC36 379 aa11.75□□□□□ -0.53
SQSTM1-201ENST00000360718 LGALS14Q8TCE9 139 aa11.75□□□□□ -0.53
SQSTM1-201ENST00000360718 GIMAP1Q8WWP7 306 aa11.75□□□□□ -0.53
SQSTM1-201ENST00000360718 C5orf34Q96MH7 638 aa11.75□□□□□ -0.53
SQSTM1-201ENST00000360718 OR5B2Q96R09 309 aa11.75□□□□□ -0.53
SQSTM1-201ENST00000360718 ZNF587Q96SQ5 575 aaPredicted RBP11.75□□□□□ -0.53
SQSTM1-201ENST00000360718 SLITRK2Q9H156 845 aa11.75□□□□□ -0.53
SQSTM1-201ENST00000360718 ZNF552Q9H707 407 aaPredicted RBP11.75□□□□□ -0.53
SQSTM1-201ENST00000360718 TMEM185BQ9H7F4 350 aa11.75□□□□□ -0.53
SQSTM1-201ENST00000360718 NOX4Q9NPH5 578 aa11.75□□□□□ -0.53
SQSTM1-201ENST00000360718 ALKBH4Q9NXW9 302 aa11.75□□□□□ -0.53
SQSTM1-201ENST00000360718 SLCO1C1Q9NYB5 712 aa11.75□□□□□ -0.53
SQSTM1-201ENST00000360718 B4GALT7Q9UBV7 327 aa11.75□□□□□ -0.53
SQSTM1-201ENST00000360718 SCP2D1Q9UJQ7 156 aa11.75□□□□□ -0.53
SQSTM1-201ENST00000360718 KLF13Q9Y2Y9 288 aaPredicted RBP11.75□□□□□ -0.53
SQSTM1-201ENST00000360718 HDGFL3Q9Y3E1 203 aa11.75□□□□□ -0.53
SQSTM1-201ENST00000360718 U3KQ87 197 aa11.75□□□□□ -0.53
SQSTM1-201ENST00000360718 GPR171O14626 319 aa11.75□□□□□ -0.53
SQSTM1-201ENST00000360718 MAGEB4O15481 346 aaPredicted RBP11.75□□□□□ -0.53
SQSTM1-201ENST00000360718 ZIC3O60481 467 aa11.75□□□□□ -0.53
SQSTM1-201ENST00000360718 SERPINI2O75830 405 aa11.75□□□□□ -0.53
SQSTM1-201ENST00000360718 SLC22A5O76082 557 aa11.75□□□□□ -0.53
SQSTM1-201ENST00000360718 GLCEO94923 617 aa11.75□□□□□ -0.53
SQSTM1-201ENST00000360718 MT-ND4P03905 459 aa11.75□□□□□ -0.53
SQSTM1-201ENST00000360718 OPN1LWP04000 364 aa11.75□□□□□ -0.53
SQSTM1-201ENST00000360718 RAF1P04049 648 aa11.75□□□□□ -0.53
SQSTM1-201ENST00000360718 CD46P15529 392 aa11.75□□□□□ -0.53
SQSTM1-201ENST00000360718 SPI1P17947 270 aa11.75□□□□□ -0.53
SQSTM1-201ENST00000360718 GDF1P27539 372 aa11.75□□□□□ -0.53
SQSTM1-201ENST00000360718 SFTPDP35247 375 aa11.75□□□□□ -0.53
SQSTM1-201ENST00000360718 CCR6P51684 374 aa11.75□□□□□ -0.53
SQSTM1-201ENST00000360718 ARG2P78540 354 aa11.75□□□□□ -0.53
SQSTM1-201ENST00000360718 MRPS10P82664 201 aaKnown RBP11.75□□□□□ -0.53
SQSTM1-201ENST00000360718 MYBPHQ13203 477 aa11.75□□□□□ -0.53
SQSTM1-201ENST00000360718 H1FNTQ75WM6 255 aaPredicted RBP11.75□□□□□ -0.53
SQSTM1-201ENST00000360718 LINGO2Q7L985 606 aa11.75□□□□□ -0.53
SQSTM1-201ENST00000360718 SYT9Q86SS6 491 aa11.75□□□□□ -0.53
SQSTM1-201ENST00000360718 TIGD4Q8IY51 512 aa11.75□□□□□ -0.53
SQSTM1-201ENST00000360718 CMTM4Q8IZR5 234 aa11.75□□□□□ -0.53
SQSTM1-201ENST00000360718 NPEPL1Q8NDH3 523 aa11.75□□□□□ -0.53
SQSTM1-201ENST00000360718 OR2M7Q8NG81 312 aa11.75□□□□□ -0.53
SQSTM1-201ENST00000360718 Q96M85 177 aa11.75□□□□□ -0.53
SQSTM1-201ENST00000360718 NMNAT3Q96T66 252 aa11.75□□□□□ -0.53
SQSTM1-201ENST00000360718 CLEC4MQ9H2X3 399 aaPredicted RBP11.75□□□□□ -0.53
SQSTM1-201ENST00000360718 TAS2R5Q9NYW4 299 aa11.75□□□□□ -0.53
SQSTM1-201ENST00000360718 BOD1L1Q8NFC6 3051 aa11.74□□□□□ -0.53
SQSTM1-201ENST00000360718 A0A0B4J203 849 aa11.74□□□□□ -0.53
SQSTM1-201ENST00000360718 OR2M5A3KFT3 312 aa11.74□□□□□ -0.53
SQSTM1-201ENST00000360718 LIPT2A6NK58 231 aa11.74□□□□□ -0.53
SQSTM1-201ENST00000360718 GJE1A6NN92 205 aa11.74□□□□□ -0.53
SQSTM1-201ENST00000360718 IFITM5A6NNB3 132 aa11.74□□□□□ -0.53
SQSTM1-201ENST00000360718 GABARAPH6UMI1 98 aa11.74□□□□□ -0.53
SQSTM1-201ENST00000360718 AIPO00170 330 aa11.74□□□□□ -0.53
SQSTM1-201ENST00000360718 PLPP3O14495 311 aa11.74□□□□□ -0.53
SQSTM1-201ENST00000360718 KLK10O43240 276 aa11.74□□□□□ -0.53
SQSTM1-201ENST00000360718 PEX14O75381 377 aa11.74□□□□□ -0.53
SQSTM1-201ENST00000360718 TRAPPC6AO75865 159 aa11.74□□□□□ -0.53
SQSTM1-201ENST00000360718 SNAPC5O75971 98 aa11.74□□□□□ -0.53
SQSTM1-201ENST00000360718 CCR9P51686 369 aa11.74□□□□□ -0.53
SQSTM1-201ENST00000360718 TLE3Q04726 772 aa11.74□□□□□ -0.53
SQSTM1-201ENST00000360718 FOXO1Q12778 655 aa11.74□□□□□ -0.53
SQSTM1-201ENST00000360718 ST3GAL2Q16842 350 aa11.74□□□□□ -0.53
SQSTM1-201ENST00000360718 TMEM176BQ3YBM2 270 aaPredicted RBP11.74□□□□□ -0.53
SQSTM1-201ENST00000360718 PRSS45Q7RTY3 260 aa11.74□□□□□ -0.53
SQSTM1-201ENST00000360718 LSM14AQ8ND56 463 aaKnown RBP11.74□□□□□ -0.53
SQSTM1-201ENST00000360718 FDCSPQ8NFU4 85 aa11.74□□□□□ -0.53
SQSTM1-201ENST00000360718 OR6K6Q8NGW6 343 aa11.74□□□□□ -0.53
SQSTM1-201ENST00000360718 RASD2Q96D21 266 aa11.74□□□□□ -0.53
SQSTM1-201ENST00000360718 S100A16Q96FQ6 103 aaKnown RBP11.74□□□□□ -0.53
SQSTM1-201ENST00000360718 PDCD1LG2Q9BQ51 273 aa11.74□□□□□ -0.53
SQSTM1-201ENST00000360718 NMNAT2Q9BZQ4 307 aa11.74□□□□□ -0.53
SQSTM1-201ENST00000360718 CHST11Q9NPF2 352 aa11.74□□□□□ -0.53
SQSTM1-201ENST00000360718 KLHL9Q9P2J3 617 aa11.74□□□□□ -0.53
SQSTM1-201ENST00000360718 MOKQ9UQ07 419 aa11.74□□□□□ -0.53
SQSTM1-201ENST00000360718 B3GALT5Q9Y2C3 310 aa11.74□□□□□ -0.53
SQSTM1-201ENST00000360718 MRPS18CQ9Y3D5 142 aaKnown RBP11.74□□□□□ -0.53
SQSTM1-201ENST00000360718 CSAG2Q9Y5P2 127 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms