RNA–Protein interactions for RNA: ENST00000357896.7

IFT20-202, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best) BASIC

Gene IFT20, Length 974 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-202ENST00000357896 TRIM15Q9C019 465 aa13.21□□□□□ -0.29
IFT20-202ENST00000357896 WNT5BQ9H1J7 359 aa13.21□□□□□ -0.29
IFT20-202ENST00000357896 SDR39U1Q9NRG7 319 aaPredicted RBP13.21□□□□□ -0.29
IFT20-202ENST00000357896 ACOXLQ9NUZ1 547 aa13.21□□□□□ -0.29
IFT20-202ENST00000357896 TBCCD1Q9NVR7 557 aa13.21□□□□□ -0.29
IFT20-202ENST00000357896 NDRG4Q9ULP0 352 aaKnown RBP13.21□□□□□ -0.29
IFT20-202ENST00000357896 KPNA4O00629 521 aaPredicted RBP13.2□□□□□ -0.3
IFT20-202ENST00000357896 PHYHO14832 338 aa13.2□□□□□ -0.3
IFT20-202ENST00000357896 ENSAO43768 121 aaKnown RBP13.2□□□□□ -0.3
IFT20-202ENST00000357896 PIP5K1CO60331 668 aa13.2□□□□□ -0.3
IFT20-202ENST00000357896 F13BP05160 661 aa13.2□□□□□ -0.3
IFT20-202ENST00000357896 CST2P09228 141 aa13.2□□□□□ -0.3
IFT20-202ENST00000357896 THRBP10828 461 aa13.2□□□□□ -0.3
IFT20-202ENST00000357896 BGNP21810 368 aa13.2□□□□□ -0.3
IFT20-202ENST00000357896 UGT2B15P54855 530 aa13.2□□□□□ -0.3
IFT20-202ENST00000357896 RUSC1-AS1Q66K80 236 aa13.2□□□□□ -0.3
IFT20-202ENST00000357896 VASH1Q7L8A9 365 aaPredicted RBP13.2□□□□□ -0.3
IFT20-202ENST00000357896 ATG16L2Q8NAA4 619 aa13.2□□□□□ -0.3
IFT20-202ENST00000357896 MPP4Q96JB8 637 aa13.2□□□□□ -0.3
IFT20-202ENST00000357896 COG8Q96MW5 612 aa13.2□□□□□ -0.3
IFT20-202ENST00000357896 PCGF1Q9BSM1 259 aa13.2□□□□□ -0.3
IFT20-202ENST00000357896 C16orf95Q9H693 158 aa13.2□□□□□ -0.3
IFT20-202ENST00000357896 ZNF205O95201 554 aa13.19□□□□□ -0.3
IFT20-202ENST00000357896 OPN1MWP04001 364 aa13.19□□□□□ -0.3
IFT20-202ENST00000357896 LIPFP07098 398 aa13.19□□□□□ -0.3
IFT20-202ENST00000357896 OPN1MW2P0DN77 364 aa13.19□□□□□ -0.3
IFT20-202ENST00000357896 OPN1MW3P0DN78 364 aa13.19□□□□□ -0.3
IFT20-202ENST00000357896 PPIBP23284 216 aaKnown RBP13.19□□□□□ -0.3
IFT20-202ENST00000357896 LAP3P28838 519 aa13.19□□□□□ -0.3
IFT20-202ENST00000357896 RPL18Q07020 188 aaKnown RBP13.19□□□□□ -0.3
IFT20-202ENST00000357896 CD47Q08722 323 aa13.19□□□□□ -0.3
IFT20-202ENST00000357896 BST1Q10588 318 aa13.19□□□□□ -0.3
IFT20-202ENST00000357896 SCARB2Q14108 478 aa13.19□□□□□ -0.3
IFT20-202ENST00000357896 ZNF404Q494X3 552 aa13.19□□□□□ -0.3
IFT20-202ENST00000357896 ENTPD8Q5MY95 495 aa13.19□□□□□ -0.3
IFT20-202ENST00000357896 SAMD5Q5TGI4 173 aa13.19□□□□□ -0.3
IFT20-202ENST00000357896 C1orf87Q8N0U7 546 aa13.19□□□□□ -0.3
IFT20-202ENST00000357896 LRTOMTQ8WZ04 291 aa13.19□□□□□ -0.3
IFT20-202ENST00000357896 NSMAFQ92636 917 aa13.19□□□□□ -0.3
IFT20-202ENST00000357896 PPP1R14AQ96A00 147 aa13.19□□□□□ -0.3
IFT20-202ENST00000357896 HAVCR1Q96D42 359 aa13.19□□□□□ -0.3
IFT20-202ENST00000357896 CMBLQ96DG6 245 aa13.19□□□□□ -0.3
IFT20-202ENST00000357896 TMEM38AQ9H6F2 299 aa13.19□□□□□ -0.3
IFT20-202ENST00000357896 INIPQ9NRY2 104 aa13.19□□□□□ -0.3
IFT20-202ENST00000357896 CENPVL3A0A0U1RRI6 287 aa13.18□□□□□ -0.3
IFT20-202ENST00000357896 CPSF4LA6NMK7 179 aaKnown RBP13.18□□□□□ -0.3
IFT20-202ENST00000357896 TOX4O94842 621 aa13.18□□□□□ -0.3
IFT20-202ENST00000357896 CYB5R3P00387 301 aaPredicted RBP13.18□□□□□ -0.3
IFT20-202ENST00000357896 IGHV4-59P01825 116 aa13.18□□□□□ -0.3
IFT20-202ENST00000357896 PRB2P02812 416 aaPredicted RBP13.18□□□□□ -0.3
IFT20-202ENST00000357896 AQP1P29972 269 aa13.18□□□□□ -0.3
IFT20-202ENST00000357896 IER3P46695 156 aa13.18□□□□□ -0.3
IFT20-202ENST00000357896 SRP9P49458 86 aaKnown RBP13.18□□□□□ -0.3
IFT20-202ENST00000357896 LOXL3P58215 753 aa13.18□□□□□ -0.3
IFT20-202ENST00000357896 GUCY1A3Q02108 690 aa13.18□□□□□ -0.3
IFT20-202ENST00000357896 ZNF181Q2M3W8 571 aa13.18□□□□□ -0.3
IFT20-202ENST00000357896 ARMC4Q5T2S8 1044 aa13.18□□□□□ -0.3
IFT20-202ENST00000357896 CD276Q5ZPR3 534 aa13.18□□□□□ -0.3
IFT20-202ENST00000357896 WDR25Q64LD2 544 aaPredicted RBP13.18□□□□□ -0.3
IFT20-202ENST00000357896 SLC2A7Q6PXP3 512 aa13.18□□□□□ -0.3
IFT20-202ENST00000357896 Q6ZSV7 163 aa13.18□□□□□ -0.3
IFT20-202ENST00000357896 SYT9Q86SS6 491 aa13.18□□□□□ -0.3
IFT20-202ENST00000357896 ZNF420Q8TAQ5 688 aaPredicted RBP13.18□□□□□ -0.3
IFT20-202ENST00000357896 MRAPQ8TCY5 172 aa13.18□□□□□ -0.3
IFT20-202ENST00000357896 ADAMTS16Q8TE57 1224 aa13.18□□□□□ -0.3
IFT20-202ENST00000357896 C10orf82Q8WW14 230 aa13.18□□□□□ -0.3
IFT20-202ENST00000357896 PTP4A1Q93096 173 aa13.18□□□□□ -0.3
IFT20-202ENST00000357896 NMD3Q96D46 503 aaKnown RBP13.18□□□□□ -0.3
IFT20-202ENST00000357896 RBP7Q96R05 134 aa13.18□□□□□ -0.3
IFT20-202ENST00000357896 ZNF426Q9BUY5 554 aa13.18□□□□□ -0.3
IFT20-202ENST00000357896 DPAGT1Q9H3H5 408 aa13.18□□□□□ -0.3
IFT20-202ENST00000357896 TRAPPC13A5PLN9 417 aa13.17□□□□□ -0.3
IFT20-202ENST00000357896 NPIPB13A6NJU9 1138 aa13.17□□□□□ -0.3
IFT20-202ENST00000357896 C12orf71A8MTZ7 269 aa13.17□□□□□ -0.3
IFT20-202ENST00000357896 ZNF879B4DU55 563 aa13.17□□□□□ -0.3
IFT20-202ENST00000357896 NPIPB4C9JG80 1138 aa13.17□□□□□ -0.3
IFT20-202ENST00000357896 M0R3H8 397 aa13.17□□□□□ -0.3
IFT20-202ENST00000357896 COX5BP10606 129 aa13.17□□□□□ -0.3
IFT20-202ENST00000357896 HOXB9P17482 250 aaPredicted RBP13.17□□□□□ -0.3
IFT20-202ENST00000357896 CFHR2P36980 270 aa13.17□□□□□ -0.3
IFT20-202ENST00000357896 NPY4RP50391 375 aa13.17□□□□□ -0.3
IFT20-202ENST00000357896 PCBP3P57721 371 aaKnown RBP13.17□□□□□ -0.3
IFT20-202ENST00000357896 FMODQ06828 376 aa13.17□□□□□ -0.3
IFT20-202ENST00000357896 RUNDC3AQ59EK9 446 aa13.17□□□□□ -0.3
IFT20-202ENST00000357896 SLC25A47Q6Q0C1 308 aa13.17□□□□□ -0.3
IFT20-202ENST00000357896 DCDC5Q6ZRR9 648 aa13.17□□□□□ -0.3
IFT20-202ENST00000357896 LDLRAD3Q86YD5 345 aa13.17□□□□□ -0.3
IFT20-202ENST00000357896 SMYD1Q8NB12 490 aa13.17□□□□□ -0.3
IFT20-202ENST00000357896 OR6T1Q8NGN1 323 aa13.17□□□□□ -0.3
IFT20-202ENST00000357896 OR9I1Q8NGQ6 314 aa13.17□□□□□ -0.3
IFT20-202ENST00000357896 OR13G1Q8NGZ3 307 aa13.17□□□□□ -0.3
IFT20-202ENST00000357896 FNDC8Q8TC99 324 aa13.17□□□□□ -0.3
IFT20-202ENST00000357896 MEGF10Q96KG7 1140 aa13.17□□□□□ -0.3
IFT20-202ENST00000357896 WACQ9BTA9 647 aa13.17□□□□□ -0.3
IFT20-202ENST00000357896 CDADC1Q9BWV3 514 aa13.17□□□□□ -0.3
IFT20-202ENST00000357896 SSU72Q9NP77 194 aaKnown RBP13.17□□□□□ -0.3
IFT20-202ENST00000357896 SLC25A37Q9NYZ2 338 aa13.17□□□□□ -0.3
IFT20-202ENST00000357896 SLC7A7Q9UM01 511 aa13.17□□□□□ -0.3
IFT20-202ENST00000357896 CORO2BQ9UQ03 480 aa13.17□□□□□ -0.3
IFT20-202ENST00000357896 IGKV1D-43A0A0B4J1Z2 117 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms