RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 FAM220AQ7Z4H9 259 aa15.98■□□□□ 0.15
SMARCD3-202ENST00000356800 DCXRQ7Z4W1 244 aa15.98■□□□□ 0.15
SMARCD3-202ENST00000356800 CD163Q86VB7 1156 aa15.98■□□□□ 0.15
SMARCD3-202ENST00000356800 OR10H5Q8NGA6 315 aa15.98■□□□□ 0.15
SMARCD3-202ENST00000356800 RPS4Y2Q8TD47 263 aa15.98■□□□□ 0.15
SMARCD3-202ENST00000356800 PGLYRP3Q96LB9 341 aa15.98■□□□□ 0.15
SMARCD3-202ENST00000356800 RNF167Q9H6Y7 350 aa15.98■□□□□ 0.15
SMARCD3-202ENST00000356800 C12orf49Q9H741 205 aa15.98■□□□□ 0.15
SMARCD3-202ENST00000356800 SIAEQ9HAT2 523 aa15.98■□□□□ 0.15
SMARCD3-202ENST00000356800 TXNL4BQ9NX01 149 aaKnown RBP15.98■□□□□ 0.15
SMARCD3-202ENST00000356800 SLCO1C1Q9NYB5 712 aa15.98■□□□□ 0.15
SMARCD3-202ENST00000356800 GRIP1Q9Y3R0 1128 aa15.98■□□□□ 0.15
SMARCD3-202ENST00000356800 FAM215AQ9Y5M1 114 aa15.98■□□□□ 0.15
SMARCD3-202ENST00000356800 MSR1P21757 451 aa15.97■□□□□ 0.15
SMARCD3-202ENST00000356800 MRPS34P82930 218 aaKnown RBP15.97■□□□□ 0.15
SMARCD3-202ENST00000356800 ENDOGQ14249 297 aaKnown RBP15.97■□□□□ 0.15
SMARCD3-202ENST00000356800 PCSK4Q6UW60 755 aa15.97■□□□□ 0.15
SMARCD3-202ENST00000356800 SMIM19Q96E16 107 aa15.97■□□□□ 0.15
SMARCD3-202ENST00000356800 MAP6Q96JE9 813 aa15.97■□□□□ 0.15
SMARCD3-202ENST00000356800 OR8B4Q96RC9 309 aa15.97■□□□□ 0.15
SMARCD3-202ENST00000356800 TMED9Q9BVK6 235 aa15.97■□□□□ 0.15
SMARCD3-202ENST00000356800 ZNF416Q9BWM5 594 aa15.97■□□□□ 0.15
SMARCD3-202ENST00000356800 NELFAQ9H3P2 528 aa15.97■□□□□ 0.15
SMARCD3-202ENST00000356800 TMEM38BQ9NVV0 291 aa15.97■□□□□ 0.15
SMARCD3-202ENST00000356800 OR6C65A6NJZ3 312 aa15.96■□□□□ 0.15
SMARCD3-202ENST00000356800 TMCC2O75069 709 aa15.96■□□□□ 0.15
SMARCD3-202ENST00000356800 WDR1O75083 606 aa15.96■□□□□ 0.15
SMARCD3-202ENST00000356800 GABRA1P14867 456 aa15.96■□□□□ 0.15
SMARCD3-202ENST00000356800 FOXG1P55316 489 aaPredicted RBP15.96■□□□□ 0.15
SMARCD3-202ENST00000356800 LSM6P62312 80 aaKnown RBP15.96■□□□□ 0.15
SMARCD3-202ENST00000356800 LY6DQ14210 128 aa15.96■□□□□ 0.15
SMARCD3-202ENST00000356800 DGUOKQ16854 277 aa15.96■□□□□ 0.15
SMARCD3-202ENST00000356800 LIPNQ5VXI9 398 aa15.96■□□□□ 0.15
SMARCD3-202ENST00000356800 KCTD18Q6PI47 426 aaPredicted RBP15.96■□□□□ 0.15
SMARCD3-202ENST00000356800 ARL9Q6T311 187 aa15.96■□□□□ 0.15
SMARCD3-202ENST00000356800 LRRN1Q6UXK5 716 aa15.96■□□□□ 0.15
SMARCD3-202ENST00000356800 SPATC1Q76KD6 591 aa15.96■□□□□ 0.15
SMARCD3-202ENST00000356800 ZNF100Q8IYN0 542 aa15.96■□□□□ 0.15
SMARCD3-202ENST00000356800 ZNF679Q8IYX0 411 aa15.96■□□□□ 0.15
SMARCD3-202ENST00000356800 RPRMLQ8N4K4 120 aa15.96■□□□□ 0.15
SMARCD3-202ENST00000356800 MS4A15Q8N5U1 240 aa15.96■□□□□ 0.15
SMARCD3-202ENST00000356800 OR10S1Q8NGN2 331 aa15.96■□□□□ 0.15
SMARCD3-202ENST00000356800 OR52N5Q8NH56 324 aa15.96■□□□□ 0.15
SMARCD3-202ENST00000356800 DACH2Q96NX9 599 aa15.96■□□□□ 0.15
SMARCD3-202ENST00000356800 CDADC1Q9BWV3 514 aa15.96■□□□□ 0.15
SMARCD3-202ENST00000356800 PRSS50Q9UI38 385 aa15.96■□□□□ 0.15
SMARCD3-202ENST00000356800 INTS1Q8N201 2190 aaKnown RBP15.96■□□□□ 0.14
SMARCD3-202ENST00000356800 MBD3L4A6NDZ8 208 aaPredicted RBP15.95■□□□□ 0.14
SMARCD3-202ENST00000356800 MBD3L3A6NE82 208 aaPredicted RBP15.95■□□□□ 0.14
SMARCD3-202ENST00000356800 MBD3L5A6NJ08 208 aaPredicted RBP15.95■□□□□ 0.14
SMARCD3-202ENST00000356800 RPL36A-HNRNPH2H7BZ11 118 aa15.95■□□□□ 0.14
SMARCD3-202ENST00000356800 KRT33AO76009 404 aa15.95■□□□□ 0.14
SMARCD3-202ENST00000356800 TOXO94900 526 aa15.95■□□□□ 0.14
SMARCD3-202ENST00000356800 ABOP16442 354 aa15.95■□□□□ 0.14
SMARCD3-202ENST00000356800 PSMB10P40306 273 aa15.95■□□□□ 0.14
SMARCD3-202ENST00000356800 KIR2DL2P43627 348 aaPredicted RBP15.95■□□□□ 0.14
SMARCD3-202ENST00000356800 OR3A2P47893 321 aa15.95■□□□□ 0.14
SMARCD3-202ENST00000356800 CFAP77Q6ZQR2 320 aa15.95■□□□□ 0.14
SMARCD3-202ENST00000356800 FAM214BQ7L5A3 538 aa15.95■□□□□ 0.14
SMARCD3-202ENST00000356800 YIPF7Q8N8F6 280 aa15.95■□□□□ 0.14
SMARCD3-202ENST00000356800 MBD3L2Q8NHZ7 208 aaPredicted RBP15.95■□□□□ 0.14
SMARCD3-202ENST00000356800 ASH2LQ9UBL3 628 aa15.95■□□□□ 0.14
SMARCD3-202ENST00000356800 GDF2Q9UK05 429 aaPredicted RBP15.95■□□□□ 0.14
SMARCD3-202ENST00000356800 IKZF2Q9UKS7 526 aa15.95■□□□□ 0.14
SMARCD3-202ENST00000356800 GSTK1Q9Y2Q3 226 aa15.95■□□□□ 0.14
SMARCD3-202ENST00000356800 POLR1DQ9Y2S0 133 aa15.95■□□□□ 0.14
SMARCD3-202ENST00000356800 B4GALT1P15291 398 aa15.95■□□□□ 0.14
SMARCD3-202ENST00000356800 PTGER4P35408 488 aa15.95■□□□□ 0.14
SMARCD3-202ENST00000356800 SERPINB10P48595 397 aa15.95■□□□□ 0.14
SMARCD3-202ENST00000356800 SLC3A1Q07837 685 aa15.95■□□□□ 0.14
SMARCD3-202ENST00000356800 FOXF2Q12947 444 aa15.95■□□□□ 0.14
SMARCD3-202ENST00000356800 SF3B4Q15427 424 aaKnown RBP eCLIP15.95■□□□□ 0.14
SMARCD3-202ENST00000356800 C1orf185Q5T7R7 199 aa15.95■□□□□ 0.14
SMARCD3-202ENST00000356800 FAM27BQ5VT28 67 aa15.95■□□□□ 0.14
SMARCD3-202ENST00000356800 C22orf42Q6IC83 251 aa15.95■□□□□ 0.14
SMARCD3-202ENST00000356800 GFRALQ6UXV0 394 aa15.95■□□□□ 0.14
SMARCD3-202ENST00000356800 RNF133Q8WVZ7 376 aa15.95■□□□□ 0.14
SMARCD3-202ENST00000356800 GHSRQ92847 366 aa15.95■□□□□ 0.14
SMARCD3-202ENST00000356800 KCTD7Q96MP8 289 aa15.95■□□□□ 0.14
SMARCD3-202ENST00000356800 FOXB1Q99853 325 aa15.95■□□□□ 0.14
SMARCD3-202ENST00000356800 HDHD5Q9BXW7 423 aa15.95■□□□□ 0.14
SMARCD3-202ENST00000356800 MROQ9BYG7 248 aa15.95■□□□□ 0.14
SMARCD3-202ENST00000356800 ELOVL3Q9HB03 270 aa15.95■□□□□ 0.14
SMARCD3-202ENST00000356800 CCDC59Q9P031 241 aaKnown RBP15.95■□□□□ 0.14
SMARCD3-202ENST00000356800 TRBV2A0A0J9YWF9 115 aa15.94■□□□□ 0.14
SMARCD3-202ENST00000356800 FIGNL2A6NMB9 653 aa15.94■□□□□ 0.14
SMARCD3-202ENST00000356800 ZNF587BE7ETH6 402 aa15.94■□□□□ 0.14
SMARCD3-202ENST00000356800 GABRPO00591 440 aa15.94■□□□□ 0.14
SMARCD3-202ENST00000356800 RGS9O75916 674 aaPredicted RBP15.94■□□□□ 0.14
SMARCD3-202ENST00000356800 CLPXO76031 633 aa15.94■□□□□ 0.14
SMARCD3-202ENST00000356800 NPR2P20594 1047 aa15.94■□□□□ 0.14
SMARCD3-202ENST00000356800 PAX7P23759 505 aa15.94■□□□□ 0.14
SMARCD3-202ENST00000356800 GUCA1AP43080 201 aaPredicted RBP15.94■□□□□ 0.14
SMARCD3-202ENST00000356800 OR2A2Q6IF42 318 aa15.94■□□□□ 0.14
SMARCD3-202ENST00000356800 DEGS2Q6QHC5 323 aa15.94■□□□□ 0.14
SMARCD3-202ENST00000356800 TFAP2EQ6VUC0 442 aa15.94■□□□□ 0.14
SMARCD3-202ENST00000356800 C3P1Q6ZMU1 363 aa15.94■□□□□ 0.14
SMARCD3-202ENST00000356800 TMEM91Q6ZNR0 172 aa15.94■□□□□ 0.14
SMARCD3-202ENST00000356800 LRRC18Q8N456 261 aa15.94■□□□□ 0.14
SMARCD3-202ENST00000356800 HSD17B8Q92506 261 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms