RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 C8orf4Q9NR00 106 aa15.51■□□□□ 0.07
PDLIM7-202ENST00000355841 RNF115Q9Y4L5 304 aa15.51■□□□□ 0.07
PDLIM7-202ENST00000355841 ROS1P08922 2347 aa15.51■□□□□ 0.07
PDLIM7-202ENST00000355841 CSMD2Q7Z408 3487 aa15.51■□□□□ 0.07
PDLIM7-202ENST00000355841 ABCA12Q86UK0 2595 aa15.51■□□□□ 0.07
PDLIM7-202ENST00000355841 ZNF593O00488 134 aaPredicted RBP15.51■□□□□ 0.07
PDLIM7-202ENST00000355841 PRODHO43272 600 aa15.51■□□□□ 0.07
PDLIM7-202ENST00000355841 SELENOFO60613 162 aa15.51■□□□□ 0.07
PDLIM7-202ENST00000355841 SPARCP09486 303 aa15.51■□□□□ 0.07
PDLIM7-202ENST00000355841 NAA10P41227 235 aaPredicted RBP15.51■□□□□ 0.07
PDLIM7-202ENST00000355841 ZNF704Q6ZNC4 412 aaPredicted RBP15.51■□□□□ 0.07
PDLIM7-202ENST00000355841 CFAP77Q6ZQR2 320 aa15.51■□□□□ 0.07
PDLIM7-202ENST00000355841 CDC20BQ86Y33 519 aa15.51■□□□□ 0.07
PDLIM7-202ENST00000355841 NRGNQ92686 78 aa15.51■□□□□ 0.07
PDLIM7-202ENST00000355841 TEAD3Q99594 435 aa15.51■□□□□ 0.07
PDLIM7-202ENST00000355841 TMEM204Q9BSN7 226 aa15.51■□□□□ 0.07
PDLIM7-202ENST00000355841 CYB5R1Q9UHQ9 305 aa15.51■□□□□ 0.07
PDLIM7-202ENST00000355841 IGHV2OR16-5A0A0B4J2B6 119 aa15.5■□□□□ 0.07
PDLIM7-202ENST00000355841 SHISA9B4DS77 424 aa15.5■□□□□ 0.07
PDLIM7-202ENST00000355841 SLC16A6O15403 523 aa15.5■□□□□ 0.07
PDLIM7-202ENST00000355841 DOK2O60496 412 aa15.5■□□□□ 0.07
PDLIM7-202ENST00000355841 MRPL3P09001 348 aaKnown RBP15.5■□□□□ 0.07
PDLIM7-202ENST00000355841 CCNOP22674 350 aa15.5■□□□□ 0.07
PDLIM7-202ENST00000355841 AQP4P55087 323 aa15.5■□□□□ 0.07
PDLIM7-202ENST00000355841 PLP2Q04941 152 aa15.5■□□□□ 0.07
PDLIM7-202ENST00000355841 NXNL2Q5VZ03 156 aa15.5■□□□□ 0.07
PDLIM7-202ENST00000355841 SLC18B1Q6NT16 456 aa15.5■□□□□ 0.07
PDLIM7-202ENST00000355841 SYT9Q86SS6 491 aa15.5■□□□□ 0.07
PDLIM7-202ENST00000355841 SLC30A7Q8NEW0 376 aa15.5■□□□□ 0.07
PDLIM7-202ENST00000355841 OR6N2Q8NGY6 317 aa15.5■□□□□ 0.07
PDLIM7-202ENST00000355841 LILRB1Q8NHL6 650 aaPredicted RBP15.5■□□□□ 0.07
PDLIM7-202ENST00000355841 SLC7A6Q92536 515 aa15.5■□□□□ 0.07
PDLIM7-202ENST00000355841 INTS14Q96SY0 518 aa15.5■□□□□ 0.07
PDLIM7-202ENST00000355841 VCXQ9H320 206 aa15.5■□□□□ 0.07
PDLIM7-202ENST00000355841 MOV10Q9HCE1 1003 aaKnown RBP15.5■□□□□ 0.07
PDLIM7-202ENST00000355841 PLEK2Q9NYT0 353 aa15.5■□□□□ 0.07
PDLIM7-202ENST00000355841 H2AFY2Q9P0M6 372 aaPredicted RBP15.5■□□□□ 0.07
PDLIM7-202ENST00000355841 GDF2Q9UK05 429 aaPredicted RBP15.5■□□□□ 0.07
PDLIM7-202ENST00000355841 APCP25054 2843 aa15.49■□□□□ 0.07
PDLIM7-202ENST00000355841 LOC100509620A0A075B734 347 aa15.49■□□□□ 0.07
PDLIM7-202ENST00000355841 IQCMA0A1B0GVH7 501 aa15.49■□□□□ 0.07
PDLIM7-202ENST00000355841 SGCEO43556 437 aa15.49■□□□□ 0.07
PDLIM7-202ENST00000355841 CRYAAP02489 173 aa15.49■□□□□ 0.07
PDLIM7-202ENST00000355841 STOMP27105 288 aa15.49■□□□□ 0.07
PDLIM7-202ENST00000355841 ENTPD1P49961 510 aa15.49■□□□□ 0.07
PDLIM7-202ENST00000355841 SCRN3Q0VDG4 424 aa15.49■□□□□ 0.07
PDLIM7-202ENST00000355841 C3orf36Q3SXR2 165 aa15.49■□□□□ 0.07
PDLIM7-202ENST00000355841 CCDC92Q53HC0 331 aaPredicted RBP15.49■□□□□ 0.07
PDLIM7-202ENST00000355841 MEPCEQ7L2J0 689 aaKnown RBP15.49■□□□□ 0.07
PDLIM7-202ENST00000355841 VASH1Q7L8A9 365 aaPredicted RBP15.49■□□□□ 0.07
PDLIM7-202ENST00000355841 TIGD4Q8IY51 512 aa15.49■□□□□ 0.07
PDLIM7-202ENST00000355841 ENTHD1Q8IYW4 607 aa15.49■□□□□ 0.07
PDLIM7-202ENST00000355841 DHRSXQ8N5I4 330 aa15.49■□□□□ 0.07
PDLIM7-202ENST00000355841 OR2AJ1Q8NGZ0 328 aa15.49■□□□□ 0.07
PDLIM7-202ENST00000355841 ZNF582Q96NG8 517 aaPredicted RBP15.49■□□□□ 0.07
PDLIM7-202ENST00000355841 KCNS3Q9BQ31 491 aa15.49■□□□□ 0.07
PDLIM7-202ENST00000355841 POU2F3Q9UKI9 436 aa15.49■□□□□ 0.07
PDLIM7-202ENST00000355841 SETXQ7Z333 2677 aaKnown RBP15.49■□□□□ 0.07
PDLIM7-202ENST00000355841 RTTNQ86VV8 2226 aa15.48■□□□□ 0.07
PDLIM7-202ENST00000355841 ENTPD6O75354 484 aa15.48■□□□□ 0.07
PDLIM7-202ENST00000355841 GNAO1P09471 354 aa15.48■□□□□ 0.07
PDLIM7-202ENST00000355841 PAX7P23759 505 aa15.48■□□□□ 0.07
PDLIM7-202ENST00000355841 BLVRAP53004 296 aa15.48■□□□□ 0.07
PDLIM7-202ENST00000355841 HCCSP53701 268 aa15.48■□□□□ 0.07
PDLIM7-202ENST00000355841 ADARB1P78563 741 aaKnown RBP15.48■□□□□ 0.07
PDLIM7-202ENST00000355841 KEAP1Q14145 624 aa15.48■□□□□ 0.07
PDLIM7-202ENST00000355841 SLC35D3Q5M8T2 416 aa15.48■□□□□ 0.07
PDLIM7-202ENST00000355841 SPATC1Q76KD6 591 aa15.48■□□□□ 0.07
PDLIM7-202ENST00000355841 DPY19L4Q7Z388 723 aa15.48■□□□□ 0.07
PDLIM7-202ENST00000355841 DCXRQ7Z4W1 244 aa15.48■□□□□ 0.07
PDLIM7-202ENST00000355841 AKAP1Q92667 903 aaKnown RBP eCLIP15.48■□□□□ 0.07
PDLIM7-202ENST00000355841 MAP6Q96JE9 813 aa15.48■□□□□ 0.07
PDLIM7-202ENST00000355841 ADI1Q9BV57 179 aa15.48■□□□□ 0.07
PDLIM7-202ENST00000355841 OR51B6Q9H340 312 aa15.48■□□□□ 0.07
PDLIM7-202ENST00000355841 LIME1Q9H400 295 aa15.48■□□□□ 0.07
PDLIM7-202ENST00000355841 UBTD1Q9HAC8 227 aa15.48■□□□□ 0.07
PDLIM7-202ENST00000355841 KCNG2Q9UJ96 466 aa15.48■□□□□ 0.07
PDLIM7-202ENST00000355841 C5orf49A4QMS7 147 aa15.48■□□□□ 0.07
PDLIM7-202ENST00000355841 APOL3O95236 402 aa15.48■□□□□ 0.07
PDLIM7-202ENST00000355841 ZNF35P13682 527 aa15.48■□□□□ 0.07
PDLIM7-202ENST00000355841 APLNRP35414 380 aa15.48■□□□□ 0.07
PDLIM7-202ENST00000355841 HTR5AP47898 357 aa15.48■□□□□ 0.07
PDLIM7-202ENST00000355841 CDH11P55287 796 aa15.48■□□□□ 0.07
PDLIM7-202ENST00000355841 HIST1H3AP68431 136 aa15.48■□□□□ 0.07
PDLIM7-202ENST00000355841 HGFACQ04756 655 aa15.48■□□□□ 0.07
PDLIM7-202ENST00000355841 HIST2H3PS2Q5TEC6 136 aa15.48■□□□□ 0.07
PDLIM7-202ENST00000355841 KRT80Q6KB66 452 aa15.48■□□□□ 0.07
PDLIM7-202ENST00000355841 HIST2H3AQ71DI3 136 aa15.48■□□□□ 0.07
PDLIM7-202ENST00000355841 ALDH16A1Q8IZ83 802 aa15.48■□□□□ 0.07
PDLIM7-202ENST00000355841 GJC3Q8NFK1 279 aa15.48■□□□□ 0.07
PDLIM7-202ENST00000355841 TRUB1Q8WWH5 349 aaKnown RBP15.48■□□□□ 0.07
PDLIM7-202ENST00000355841 PLEKHF2Q9H8W4 249 aa15.48■□□□□ 0.07
PDLIM7-202ENST00000355841 MARCH7Q9H992 704 aa15.48■□□□□ 0.07
PDLIM7-202ENST00000355841 ATP23Q9Y6H3 246 aa15.48■□□□□ 0.07
PDLIM7-202ENST00000355841 HEATR1Q9H583 2144 aaKnown RBP15.47■□□□□ 0.07
PDLIM7-202ENST00000355841 SYNGR3O43761 229 aa15.47■□□□□ 0.07
PDLIM7-202ENST00000355841 GOSR1O95249 250 aa15.47■□□□□ 0.07
PDLIM7-202ENST00000355841 DBHP09172 617 aa15.47■□□□□ 0.07
PDLIM7-202ENST00000355841 GABRB1P18505 474 aa15.47■□□□□ 0.07
PDLIM7-202ENST00000355841 SNRPGP62308 76 aaKnown RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms