RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 ZNF705GA8MUZ8 300 aaPredicted RBP13.71□□□□□ -0.21
PTBP1-201ENST00000349038 EIF1AYO14602 144 aaKnown RBP13.71□□□□□ -0.21
PTBP1-201ENST00000349038 CDC40O60508 579 aaKnown RBP eCLIP13.71□□□□□ -0.21
PTBP1-201ENST00000349038 SNRPCP09234 159 aaKnown RBP13.71□□□□□ -0.21
PTBP1-201ENST00000349038 GIMD1P0DJR0 217 aa13.71□□□□□ -0.21
PTBP1-201ENST00000349038 ADRB3P13945 408 aa13.71□□□□□ -0.21
PTBP1-201ENST00000349038 MRPS10P82664 201 aaKnown RBP13.71□□□□□ -0.21
PTBP1-201ENST00000349038 ARHGAP19Q14CB8 494 aa13.71□□□□□ -0.21
PTBP1-201ENST00000349038 ZNF343Q6P1L6 599 aa13.71□□□□□ -0.21
PTBP1-201ENST00000349038 ARHGAP11AQ6P4F7 1023 aa13.71□□□□□ -0.21
PTBP1-201ENST00000349038 OR2L13Q8N349 312 aa13.71□□□□□ -0.21
PTBP1-201ENST00000349038 CLEC1AQ8NC01 280 aa13.71□□□□□ -0.21
PTBP1-201ENST00000349038 IRF7Q92985 503 aa13.71□□□□□ -0.21
PTBP1-201ENST00000349038 KCNG2Q9UJ96 466 aa13.71□□□□□ -0.21
PTBP1-201ENST00000349038 GPR34Q9UPC5 381 aa13.71□□□□□ -0.21
PTBP1-201ENST00000349038 TCF20Q9UGU0 1960 aaKnown RBP13.71□□□□□ -0.22
PTBP1-201ENST00000349038 STK17BO94768 372 aa13.71□□□□□ -0.22
PTBP1-201ENST00000349038 PRKAR1BP31321 381 aa13.71□□□□□ -0.22
PTBP1-201ENST00000349038 HRH1P35367 487 aa13.71□□□□□ -0.22
PTBP1-201ENST00000349038 CHAF1BQ13112 559 aa13.71□□□□□ -0.22
PTBP1-201ENST00000349038 MEF2DQ14814 521 aa13.71□□□□□ -0.22
PTBP1-201ENST00000349038 MDGA2Q7Z553 956 aa13.71□□□□□ -0.22
PTBP1-201ENST00000349038 MARCH3Q86UD3 253 aa13.71□□□□□ -0.22
PTBP1-201ENST00000349038 KDM8Q8N371 416 aa13.71□□□□□ -0.22
PTBP1-201ENST00000349038 OR51A2Q8NGJ7 313 aa13.71□□□□□ -0.22
PTBP1-201ENST00000349038 BSCL2Q96G97 398 aaPredicted RBP13.71□□□□□ -0.22
PTBP1-201ENST00000349038 MENTQ9BUN1 341 aa13.71□□□□□ -0.22
PTBP1-201ENST00000349038 KCNE5Q9UJ90 142 aa13.71□□□□□ -0.22
PTBP1-201ENST00000349038 RCL1Q9Y2P8 373 aaKnown RBP13.71□□□□□ -0.22
PTBP1-201ENST00000349038 WNT6Q9Y6F9 365 aa13.71□□□□□ -0.22
PTBP1-201ENST00000349038 A0A1W2PPV9 198 aa13.7□□□□□ -0.22
PTBP1-201ENST00000349038 GNALP38405 381 aa13.7□□□□□ -0.22
PTBP1-201ENST00000349038 WASP42768 502 aa13.7□□□□□ -0.22
PTBP1-201ENST00000349038 LINC01555Q8NAE3 123 aa13.7□□□□□ -0.22
PTBP1-201ENST00000349038 OR4N2Q8NGD1 307 aa13.7□□□□□ -0.22
PTBP1-201ENST00000349038 MFSD8Q8NHS3 518 aa13.7□□□□□ -0.22
PTBP1-201ENST00000349038 OR8D1Q8WZ84 308 aa13.7□□□□□ -0.22
PTBP1-201ENST00000349038 TMPRSS5Q9H3S3 457 aa13.7□□□□□ -0.22
PTBP1-201ENST00000349038 TAF9BQ9HBM6 251 aa13.7□□□□□ -0.22
PTBP1-201ENST00000349038 DTX4Q9Y2E6 619 aa13.7□□□□□ -0.22
PTBP1-201ENST00000349038 CACNA1DQ01668 2161 aa13.7□□□□□ -0.22
PTBP1-201ENST00000349038 KIF26BQ2KJY2 2108 aa13.7□□□□□ -0.22
PTBP1-201ENST00000349038 A0A1W2PPC1 479 aa13.7□□□□□ -0.22
PTBP1-201ENST00000349038 VEGFDO43915 354 aa13.7□□□□□ -0.22
PTBP1-201ENST00000349038 CYTIPO60759 359 aa13.7□□□□□ -0.22
PTBP1-201ENST00000349038 GNRH1P01148 92 aa13.7□□□□□ -0.22
PTBP1-201ENST00000349038 ACTBP60709 375 aa13.7□□□□□ -0.22
PTBP1-201ENST00000349038 SSTP61278 116 aa13.7□□□□□ -0.22
PTBP1-201ENST00000349038 ACTG1P63261 375 aa13.7□□□□□ -0.22
PTBP1-201ENST00000349038 LY6G5CQ5SRR4 150 aa13.7□□□□□ -0.22
PTBP1-201ENST00000349038 COL13A1Q5TAT6 717 aaPredicted RBP13.7□□□□□ -0.22
PTBP1-201ENST00000349038 ZNF765Q7L2R6 523 aa13.7□□□□□ -0.22
PTBP1-201ENST00000349038 SUSD6Q92537 303 aa13.7□□□□□ -0.22
PTBP1-201ENST00000349038 NUS1Q96E22 293 aa13.7□□□□□ -0.22
PTBP1-201ENST00000349038 SDHAF3Q9NRP4 125 aa13.7□□□□□ -0.22
PTBP1-201ENST00000349038 LSM5Q9Y4Y9 91 aaKnown RBP13.7□□□□□ -0.22
PTBP1-201ENST00000349038 HEATR5AQ86XA9 2040 aa13.7□□□□□ -0.22
PTBP1-201ENST00000349038 MAPK3P27361 379 aaPredicted RBP13.69□□□□□ -0.22
PTBP1-201ENST00000349038 HSD17B2P37059 387 aa13.69□□□□□ -0.22
PTBP1-201ENST00000349038 EIF1AXP47813 144 aaKnown RBP13.69□□□□□ -0.22
PTBP1-201ENST00000349038 DCST2Q5T1A1 773 aa13.69□□□□□ -0.22
PTBP1-201ENST00000349038 SKA3Q8IX90 412 aa13.69□□□□□ -0.22
PTBP1-201ENST00000349038 SEH1LQ96EE3 360 aa13.69□□□□□ -0.22
PTBP1-201ENST00000349038 MISP3Q96FF7 219 aa13.69□□□□□ -0.22
PTBP1-201ENST00000349038 ZNF558Q96NG5 402 aa13.69□□□□□ -0.22
PTBP1-201ENST00000349038 SEC61A2Q9H9S3 476 aa13.69□□□□□ -0.22
PTBP1-201ENST00000349038 FLRT3Q9NZU0 649 aa13.69□□□□□ -0.22
PTBP1-201ENST00000349038 LPAR3Q9UBY5 353 aa13.69□□□□□ -0.22
PTBP1-201ENST00000349038 PISDQ9UG56 409 aa13.69□□□□□ -0.22
PTBP1-201ENST00000349038 SNRNP200O75643 2136 aaKnown RBP13.69□□□□□ -0.22
PTBP1-201ENST00000349038 UMAD1C9J7I0 102 aa13.69□□□□□ -0.22
PTBP1-201ENST00000349038 NDUFB2O95178 105 aa13.69□□□□□ -0.22
PTBP1-201ENST00000349038 MT-ND4LP03901 98 aa13.69□□□□□ -0.22
PTBP1-201ENST00000349038 RGS19P49795 217 aa13.69□□□□□ -0.22
PTBP1-201ENST00000349038 DCDP81605 110 aaKnown RBP13.69□□□□□ -0.22
PTBP1-201ENST00000349038 RIPPLY1Q0D2K3 151 aa13.69□□□□□ -0.22
PTBP1-201ENST00000349038 LHX8Q68G74 356 aa13.69□□□□□ -0.22
PTBP1-201ENST00000349038 TRAPPC6BQ86SZ2 158 aa13.69□□□□□ -0.22
PTBP1-201ENST00000349038 ZNF679Q8IYX0 411 aa13.69□□□□□ -0.22
PTBP1-201ENST00000349038 RNASE11Q8TAA1 199 aaKnown RBP13.69□□□□□ -0.22
PTBP1-201ENST00000349038 ZNF587Q96SQ5 575 aaPredicted RBP13.69□□□□□ -0.22
PTBP1-201ENST00000349038 SPHK2Q9NRA0 654 aa13.69□□□□□ -0.22
PTBP1-201ENST00000349038 CARHSP1Q9Y2V2 147 aaKnown RBP13.69□□□□□ -0.22
PTBP1-201ENST00000349038 A0A0A6YYH2 397 aa13.69□□□□□ -0.22
PTBP1-201ENST00000349038 A6NJ64 397 aa13.69□□□□□ -0.22
PTBP1-201ENST00000349038 DUXAA6NLW8 204 aa13.69□□□□□ -0.22
PTBP1-201ENST00000349038 MBTPS2O43462 519 aa13.69□□□□□ -0.22
PTBP1-201ENST00000349038 EEF1A1P68104 462 aaKnown RBP13.69□□□□□ -0.22
PTBP1-201ENST00000349038 SP3Q02447 781 aa13.69□□□□□ -0.22
PTBP1-201ENST00000349038 EEF1A1P5Q5VTE0 462 aa13.69□□□□□ -0.22
PTBP1-201ENST00000349038 SLC39A5Q6ZMH5 540 aa13.69□□□□□ -0.22
PTBP1-201ENST00000349038 P4HA3Q7Z4N8 544 aa13.69□□□□□ -0.22
PTBP1-201ENST00000349038 NRROSQ86YC3 692 aa13.69□□□□□ -0.22
PTBP1-201ENST00000349038 EID2Q8N6I1 236 aa13.69□□□□□ -0.22
PTBP1-201ENST00000349038 OR13C8Q8NGS7 320 aa13.69□□□□□ -0.22
PTBP1-201ENST00000349038 TMEM41AQ96HV5 264 aa13.69□□□□□ -0.22
PTBP1-201ENST00000349038 SLC41A2Q96JW4 573 aa13.69□□□□□ -0.22
PTBP1-201ENST00000349038 AMELYQ99218 206 aa13.69□□□□□ -0.22
PTBP1-201ENST00000349038 PCBD2Q9H0N5 130 aa13.69□□□□□ -0.22
PTBP1-201ENST00000349038 HCFC1R1Q9NWW0 138 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms