RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 Q7L0L9 218 aa13.31□□□□□ -0.28
VIPAS39-202ENST00000343765 GPAT4Q86UL3 456 aa13.31□□□□□ -0.28
VIPAS39-202ENST00000343765 ZNF454Q8N9F8 522 aa13.31□□□□□ -0.28
VIPAS39-202ENST00000343765 OR2I1PQ8NGU4 316 aa13.31□□□□□ -0.28
VIPAS39-202ENST00000343765 NUBPLQ8TB37 319 aa13.31□□□□□ -0.28
VIPAS39-202ENST00000343765 ST7LQ8TDW4 575 aa13.31□□□□□ -0.28
VIPAS39-202ENST00000343765 NKD1Q969G9 470 aa13.31□□□□□ -0.28
VIPAS39-202ENST00000343765 KCNK17Q96T54 332 aa13.31□□□□□ -0.28
VIPAS39-202ENST00000343765 PRDM6Q9NQX0 595 aa13.31□□□□□ -0.28
VIPAS39-202ENST00000343765 HHLA2Q9UM44 414 aa13.31□□□□□ -0.28
VIPAS39-202ENST00000343765 MRPS18BQ9Y676 258 aaKnown RBP13.31□□□□□ -0.28
VIPAS39-202ENST00000343765 U3KQ87 197 aa13.31□□□□□ -0.28
VIPAS39-202ENST00000343765 RTTNQ86VV8 2226 aa13.31□□□□□ -0.28
VIPAS39-202ENST00000343765 SDK2Q58EX2 2172 aa13.31□□□□□ -0.28
VIPAS39-202ENST00000343765 A0A1W2PNR3 127 aa13.31□□□□□ -0.28
VIPAS39-202ENST00000343765 G3V3Q6 166 aa13.31□□□□□ -0.28
VIPAS39-202ENST00000343765 CD3DP04234 171 aa13.31□□□□□ -0.28
VIPAS39-202ENST00000343765 TPOP07202 933 aa13.31□□□□□ -0.28
VIPAS39-202ENST00000343765 H2BFMP0C1H6 154 aa13.31□□□□□ -0.28
VIPAS39-202ENST00000343765 FAUP35544 74 aaKnown RBP13.31□□□□□ -0.28
VIPAS39-202ENST00000343765 MYBPHQ13203 477 aa13.31□□□□□ -0.28
VIPAS39-202ENST00000343765 CARD17Q5XLA6 110 aa13.31□□□□□ -0.28
VIPAS39-202ENST00000343765 NHLRC1Q6VVB1 395 aa13.31□□□□□ -0.28
VIPAS39-202ENST00000343765 CPEB2Q7Z5Q1 589 aaKnown RBP13.31□□□□□ -0.28
VIPAS39-202ENST00000343765 ZNF680Q8NEM1 530 aa13.31□□□□□ -0.28
VIPAS39-202ENST00000343765 OR51S1Q8NGJ8 323 aa13.31□□□□□ -0.28
VIPAS39-202ENST00000343765 THRSPQ92748 146 aa13.31□□□□□ -0.28
VIPAS39-202ENST00000343765 ELF5Q9UKW6 265 aaPredicted RBP13.31□□□□□ -0.28
VIPAS39-202ENST00000343765 ASPMQ8IZT6 3477 aa13.3□□□□□ -0.28
VIPAS39-202ENST00000343765 LY6G6EA0A0G2JKS1 128 aa13.3□□□□□ -0.28
VIPAS39-202ENST00000343765 A0A1W2PPC1 479 aa13.3□□□□□ -0.28
VIPAS39-202ENST00000343765 LIPT2A6NK58 231 aa13.3□□□□□ -0.28
VIPAS39-202ENST00000343765 NOS1APO75052 506 aaPredicted RBP13.3□□□□□ -0.28
VIPAS39-202ENST00000343765 VSIG10L2P0DP72 767 aa13.3□□□□□ -0.28
VIPAS39-202ENST00000343765 ZNF24P17028 368 aa13.3□□□□□ -0.28
VIPAS39-202ENST00000343765 PRSS3P35030 304 aa13.3□□□□□ -0.28
VIPAS39-202ENST00000343765 MAP2K6P52564 334 aa13.3□□□□□ -0.28
VIPAS39-202ENST00000343765 PSMA6P60900 246 aaKnown RBP13.3□□□□□ -0.28
VIPAS39-202ENST00000343765 OC90Q02509 493 aaPredicted RBP13.3□□□□□ -0.28
VIPAS39-202ENST00000343765 SNTA1Q13424 505 aa13.3□□□□□ -0.28
VIPAS39-202ENST00000343765 HEXA-AS1Q9H8Q6 139 aa13.3□□□□□ -0.28
VIPAS39-202ENST00000343765 G6PC2Q9NQR9 355 aa13.3□□□□□ -0.28
VIPAS39-202ENST00000343765 PRMT8Q9NR22 394 aaPredicted RBP13.3□□□□□ -0.28
VIPAS39-202ENST00000343765 FBXL2Q9UKC9 423 aa13.3□□□□□ -0.28
VIPAS39-202ENST00000343765 SIT1Q9Y3P8 196 aa13.3□□□□□ -0.28
VIPAS39-202ENST00000343765 U3KQA8 63 aa13.3□□□□□ -0.28
VIPAS39-202ENST00000343765 A0A1W2PPL8 197 aa13.3□□□□□ -0.28
VIPAS39-202ENST00000343765 SRSF10O75494 262 aaKnown RBP13.3□□□□□ -0.28
VIPAS39-202ENST00000343765 FOSL2P15408 326 aa13.3□□□□□ -0.28
VIPAS39-202ENST00000343765 PTGS2P35354 604 aa13.3□□□□□ -0.28
VIPAS39-202ENST00000343765 SCAND1P57086 179 aa13.3□□□□□ -0.28
VIPAS39-202ENST00000343765 OR10H5Q8NGA6 315 aa13.3□□□□□ -0.28
VIPAS39-202ENST00000343765 C11orf40Q8WZ69 217 aa13.3□□□□□ -0.28
VIPAS39-202ENST00000343765 NPDC1Q9NQX5 325 aaPredicted RBP13.3□□□□□ -0.28
VIPAS39-202ENST00000343765 SERINC1Q9NRX5 453 aa13.3□□□□□ -0.28
VIPAS39-202ENST00000343765 EMC3Q9P0I2 261 aa13.3□□□□□ -0.28
VIPAS39-202ENST00000343765 MYOTQ9UBF9 498 aa13.3□□□□□ -0.28
VIPAS39-202ENST00000343765 PPIEQ9UNP9 301 aaKnown RBP13.3□□□□□ -0.28
VIPAS39-202ENST00000343765 RALGAPA1Q6GYQ0 2036 aa13.29□□□□□ -0.28
VIPAS39-202ENST00000343765 SIX6O95475 246 aa13.29□□□□□ -0.28
VIPAS39-202ENST00000343765 CSF1P09603 554 aa13.29□□□□□ -0.28
VIPAS39-202ENST00000343765 SFTPDP35247 375 aa13.29□□□□□ -0.28
VIPAS39-202ENST00000343765 MFSD13AQ14CX5 517 aa13.29□□□□□ -0.28
VIPAS39-202ENST00000343765 PRAMEF20Q5VT98 475 aa13.29□□□□□ -0.28
VIPAS39-202ENST00000343765 FAM166AQ6J272 317 aa13.29□□□□□ -0.28
VIPAS39-202ENST00000343765 SLC25A28Q96A46 364 aa13.29□□□□□ -0.28
VIPAS39-202ENST00000343765 SPSB2Q99619 263 aa13.29□□□□□ -0.28
VIPAS39-202ENST00000343765 SEC61A2Q9H9S3 476 aa13.29□□□□□ -0.28
VIPAS39-202ENST00000343765 GPN1Q9HCN4 374 aaPredicted RBP13.29□□□□□ -0.28
VIPAS39-202ENST00000343765 OCIAD1Q9NX40 245 aa13.29□□□□□ -0.28
VIPAS39-202ENST00000343765 PTTG3PQ9NZH4 202 aa13.29□□□□□ -0.28
VIPAS39-202ENST00000343765 NPTNQ9Y639 398 aa13.29□□□□□ -0.28
VIPAS39-202ENST00000343765 TOX3O15405 576 aaPredicted RBP13.29□□□□□ -0.28
VIPAS39-202ENST00000343765 ZFAND5O76080 213 aa13.29□□□□□ -0.28
VIPAS39-202ENST00000343765 MPC2O95563 127 aa13.29□□□□□ -0.28
VIPAS39-202ENST00000343765 GNALP38405 381 aa13.29□□□□□ -0.28
VIPAS39-202ENST00000343765 ZP4Q12836 540 aa13.29□□□□□ -0.28
VIPAS39-202ENST00000343765 RBMS2Q15434 407 aaKnown RBP13.29□□□□□ -0.28
VIPAS39-202ENST00000343765 PLPPR5Q32ZL2 321 aa13.29□□□□□ -0.28
VIPAS39-202ENST00000343765 ZNF626Q68DY1 528 aa13.29□□□□□ -0.28
VIPAS39-202ENST00000343765 DNM1P46Q6ZS02 220 aa13.29□□□□□ -0.28
VIPAS39-202ENST00000343765 PPP1R3BQ86XI6 285 aa13.29□□□□□ -0.28
VIPAS39-202ENST00000343765 OR5L2Q8NGL0 311 aa13.29□□□□□ -0.28
VIPAS39-202ENST00000343765 CLDN23Q96B33 292 aa13.29□□□□□ -0.28
VIPAS39-202ENST00000343765 OR5B2Q96R09 309 aa13.29□□□□□ -0.28
VIPAS39-202ENST00000343765 IGFBP3P17936 291 aaPredicted RBP13.28□□□□□ -0.28
VIPAS39-202ENST00000343765 CDAP32320 146 aa13.28□□□□□ -0.28
VIPAS39-202ENST00000343765 SUMO3P55854 103 aaPredicted RBP13.28□□□□□ -0.28
VIPAS39-202ENST00000343765 POU4F3Q15319 338 aa13.28□□□□□ -0.28
VIPAS39-202ENST00000343765 CSRP2Q16527 193 aa13.28□□□□□ -0.28
VIPAS39-202ENST00000343765 SEZ6L2Q6UXD5 910 aa13.28□□□□□ -0.28
VIPAS39-202ENST00000343765 POC1BQ8TC44 478 aa13.28□□□□□ -0.28
VIPAS39-202ENST00000343765 FGGYQ96C11 551 aa13.28□□□□□ -0.28
VIPAS39-202ENST00000343765 DUSP23Q9BVJ7 150 aa13.28□□□□□ -0.28
VIPAS39-202ENST00000343765 B3GNT4Q9C0J1 378 aa13.28□□□□□ -0.28
VIPAS39-202ENST00000343765 CLEC4MQ9H2X3 399 aaPredicted RBP13.28□□□□□ -0.28
VIPAS39-202ENST00000343765 ALKBH4Q9NXW9 302 aa13.28□□□□□ -0.28
VIPAS39-202ENST00000343765 POLR1DQ9Y2S0 133 aa13.28□□□□□ -0.28
VIPAS39-202ENST00000343765 WIF1Q9Y5W5 379 aa13.28□□□□□ -0.28
VIPAS39-202ENST00000343765 A0A1W2PQ72 361 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms