RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 CTLA4P16410 223 aa13.04□□□□□ -0.32
CXCL12-201ENST00000343575 ZNF43P17038 809 aa13.04□□□□□ -0.32
CXCL12-201ENST00000343575 GABRA5P31644 462 aa13.04□□□□□ -0.32
CXCL12-201ENST00000343575 PYCR1P32322 319 aa13.04□□□□□ -0.32
CXCL12-201ENST00000343575 DAP3P51398 398 aaKnown RBP13.04□□□□□ -0.32
CXCL12-201ENST00000343575 ETFDHQ16134 617 aa13.04□□□□□ -0.32
CXCL12-201ENST00000343575 EEF1A1P5Q5VTE0 462 aa13.04□□□□□ -0.32
CXCL12-201ENST00000343575 HACD4Q5VWC8 232 aa13.04□□□□□ -0.32
CXCL12-201ENST00000343575 CD200R1LQ6Q8B3 271 aa13.04□□□□□ -0.32
CXCL12-201ENST00000343575 SLC51BQ86UW2 128 aa13.04□□□□□ -0.32
CXCL12-201ENST00000343575 IQCF2Q8IXL9 164 aa13.04□□□□□ -0.32
CXCL12-201ENST00000343575 Q8NA96 180 aa13.04□□□□□ -0.32
CXCL12-201ENST00000343575 SYT14Q8NB59 555 aa13.04□□□□□ -0.32
CXCL12-201ENST00000343575 OR9K2Q8NGE7 335 aa13.04□□□□□ -0.32
CXCL12-201ENST00000343575 SMAP2Q8WU79 429 aaPredicted RBP13.04□□□□□ -0.32
CXCL12-201ENST00000343575 ACOT12Q8WYK0 555 aa13.04□□□□□ -0.32
CXCL12-201ENST00000343575 CPNE4Q96A23 557 aaPredicted RBP13.04□□□□□ -0.32
CXCL12-201ENST00000343575 ZMYND19Q96E35 227 aaPredicted RBP13.04□□□□□ -0.32
CXCL12-201ENST00000343575 DCLRE1CQ96SD1 692 aaKnown RBP13.04□□□□□ -0.32
CXCL12-201ENST00000343575 KCNJ15Q99712 375 aa13.04□□□□□ -0.32
CXCL12-201ENST00000343575 NAA11Q9BSU3 229 aaPredicted RBP13.04□□□□□ -0.32
CXCL12-201ENST00000343575 RANBP3Q9H6Z4 567 aaPredicted RBP13.04□□□□□ -0.32
CXCL12-201ENST00000343575 ADGRL4Q9HBW9 690 aa13.04□□□□□ -0.32
CXCL12-201ENST00000343575 PRELID1Q9Y255 219 aa13.04□□□□□ -0.32
CXCL12-201ENST00000343575 AUP1Q9Y679 476 aa13.04□□□□□ -0.32
CXCL12-201ENST00000343575 TRDV1A0A1B0GX56 115 aa13.04□□□□□ -0.32
CXCL12-201ENST00000343575 SLC22A31A6NKX4 558 aa13.04□□□□□ -0.32
CXCL12-201ENST00000343575 LEUTXA8MZ59 168 aa13.04□□□□□ -0.32
CXCL12-201ENST00000343575 XKRYO14609 159 aa13.04□□□□□ -0.32
CXCL12-201ENST00000343575 AQP8O94778 261 aa13.04□□□□□ -0.32
CXCL12-201ENST00000343575 ARSBP15848 533 aa13.04□□□□□ -0.32
CXCL12-201ENST00000343575 GALP22466 123 aa13.04□□□□□ -0.32
CXCL12-201ENST00000343575 MXD1Q05195 221 aa13.04□□□□□ -0.32
CXCL12-201ENST00000343575 FMODQ06828 376 aa13.04□□□□□ -0.32
CXCL12-201ENST00000343575 HSD17B12Q53GQ0 312 aa13.04□□□□□ -0.32
CXCL12-201ENST00000343575 ZBTB37Q5TC79 503 aa13.04□□□□□ -0.32
CXCL12-201ENST00000343575 C22orf42Q6IC83 251 aa13.04□□□□□ -0.32
CXCL12-201ENST00000343575 OR51G2Q8NGK0 314 aa13.04□□□□□ -0.32
CXCL12-201ENST00000343575 OR6X1Q8NH79 312 aa13.04□□□□□ -0.32
CXCL12-201ENST00000343575 ABHD3Q8WU67 409 aa13.04□□□□□ -0.32
CXCL12-201ENST00000343575 ALG12Q9BV10 488 aa13.04□□□□□ -0.32
CXCL12-201ENST00000343575 SF3B5Q9BWJ5 86 aaKnown RBP13.04□□□□□ -0.32
CXCL12-201ENST00000343575 BEX2Q9BXY8 128 aa13.04□□□□□ -0.32
CXCL12-201ENST00000343575 B9D1Q9UPM9 204 aa13.04□□□□□ -0.32
CXCL12-201ENST00000343575 HSPB11Q9Y547 144 aa13.04□□□□□ -0.32
CXCL12-201ENST00000343575 SVILO95425 2214 aa13.03□□□□□ -0.32
CXCL12-201ENST00000343575 DSPP15924 2871 aaKnown RBP13.03□□□□□ -0.32
CXCL12-201ENST00000343575 IGLV1-36A0A0B4J1U3 117 aa13.03□□□□□ -0.32
CXCL12-201ENST00000343575 CYTIPO60759 359 aa13.03□□□□□ -0.32
CXCL12-201ENST00000343575 ZNF432O94892 652 aa13.03□□□□□ -0.32
CXCL12-201ENST00000343575 GLCEO94923 617 aa13.03□□□□□ -0.32
CXCL12-201ENST00000343575 GPANK1O95872 356 aa13.03□□□□□ -0.32
CXCL12-201ENST00000343575 IGHA1P01876 353 aa13.03□□□□□ -0.32
CXCL12-201ENST00000343575 TFP02787 698 aa13.03□□□□□ -0.32
CXCL12-201ENST00000343575 PGA4P0DJD7 388 aa13.03□□□□□ -0.32
CXCL12-201ENST00000343575 PGA3P0DJD8 388 aa13.03□□□□□ -0.32
CXCL12-201ENST00000343575 PRKACBP22694 351 aa13.03□□□□□ -0.32
CXCL12-201ENST00000343575 EVX1P49640 407 aa13.03□□□□□ -0.32
CXCL12-201ENST00000343575 ETV1P50549 477 aa13.03□□□□□ -0.32
CXCL12-201ENST00000343575 SLC16A1P53985 500 aa13.03□□□□□ -0.32
CXCL12-201ENST00000343575 RPS7P62081 194 aaKnown RBP13.03□□□□□ -0.32
CXCL12-201ENST00000343575 TAGLNQ01995 201 aaKnown RBP13.03□□□□□ -0.32
CXCL12-201ENST00000343575 GGTLC2Q14390 218 aa13.03□□□□□ -0.32
CXCL12-201ENST00000343575 MEIOBQ8N635 442 aa13.03□□□□□ -0.32
CXCL12-201ENST00000343575 ZNF511Q8NB15 262 aa13.03□□□□□ -0.32
CXCL12-201ENST00000343575 ZNF775Q96BV0 537 aaPredicted RBP13.03□□□□□ -0.32
CXCL12-201ENST00000343575 ARPC5LQ9BPX5 153 aa13.03□□□□□ -0.32
CXCL12-201ENST00000343575 EIF3KQ9UBQ5 218 aaKnown RBP13.03□□□□□ -0.32
CXCL12-201ENST00000343575 FLVCR1Q9Y5Y0 555 aa13.03□□□□□ -0.32
CXCL12-201ENST00000343575 A6NIZ1 184 aa13.02□□□□□ -0.32
CXCL12-201ENST00000343575 INMT-MINDY4F8WBC2 141 aa13.02□□□□□ -0.32
CXCL12-201ENST00000343575 RENP00797 406 aa13.02□□□□□ -0.32
CXCL12-201ENST00000343575 MRPL3P09001 348 aaKnown RBP13.02□□□□□ -0.32
CXCL12-201ENST00000343575 SBK2P0C263 348 aa13.02□□□□□ -0.32
CXCL12-201ENST00000343575 LIMS3P0CW19 117 aa13.02□□□□□ -0.32
CXCL12-201ENST00000343575 LIMS4P0CW20 117 aa13.02□□□□□ -0.32
CXCL12-201ENST00000343575 CD79BP40259 229 aa13.02□□□□□ -0.32
CXCL12-201ENST00000343575 CLDN17P56750 224 aa13.02□□□□□ -0.32
CXCL12-201ENST00000343575 RAP1BP61224 184 aa13.02□□□□□ -0.32
CXCL12-201ENST00000343575 RAP1AP62834 184 aa13.02□□□□□ -0.32
CXCL12-201ENST00000343575 CAMK2DQ13557 499 aa13.02□□□□□ -0.32
CXCL12-201ENST00000343575 PON3Q15166 354 aa13.02□□□□□ -0.32
CXCL12-201ENST00000343575 HIST3H3Q16695 136 aa13.02□□□□□ -0.32
CXCL12-201ENST00000343575 CDONQ4KMG0 1287 aa13.02□□□□□ -0.32
CXCL12-201ENST00000343575 SLC35D3Q5M8T2 416 aa13.02□□□□□ -0.32
CXCL12-201ENST00000343575 PDSS1Q5T2R2 415 aa13.02□□□□□ -0.32
CXCL12-201ENST00000343575 FAM205BPQ63HN1 556 aa13.02□□□□□ -0.32
CXCL12-201ENST00000343575 LAMTOR1Q6IAA8 161 aa13.02□□□□□ -0.32
CXCL12-201ENST00000343575 CNIH2Q6PI25 160 aa13.02□□□□□ -0.32
CXCL12-201ENST00000343575 FCRLAQ7L513 359 aa13.02□□□□□ -0.32
CXCL12-201ENST00000343575 FGD2Q7Z6J4 655 aa13.02□□□□□ -0.32
CXCL12-201ENST00000343575 FNDC9Q8TBE3 224 aa13.02□□□□□ -0.32
CXCL12-201ENST00000343575 RNF128Q8TEB7 428 aa13.02□□□□□ -0.32
CXCL12-201ENST00000343575 SLC25A44Q96H78 314 aaPredicted RBP13.02□□□□□ -0.32
CXCL12-201ENST00000343575 GPR137Q96N19 417 aa13.02□□□□□ -0.32
CXCL12-201ENST00000343575 PRDM14Q9GZV8 571 aa13.02□□□□□ -0.32
CXCL12-201ENST00000343575 EXO5Q9H790 373 aa13.02□□□□□ -0.32
CXCL12-201ENST00000343575 EMC7Q9NPA0 242 aa13.02□□□□□ -0.32
CXCL12-201ENST00000343575 FKBP7Q9Y680 259 aa13.02□□□□□ -0.32
CXCL12-201ENST00000343575 MAP1BP46821 2468 aaKnown RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms