RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 TAS2R16Q9NYV7 291 aa11.52□□□□□ -0.56
LIN54-201ENST00000340417 GDF2Q9UK05 429 aaPredicted RBP11.52□□□□□ -0.56
LIN54-201ENST00000340417 ASXL3Q9C0F0 2248 aa11.52□□□□□ -0.56
LIN54-201ENST00000340417 ZNF646O15015 1829 aaPredicted RBP11.52□□□□□ -0.56
LIN54-201ENST00000340417 SERTM1A2A2V5 107 aa11.52□□□□□ -0.56
LIN54-201ENST00000340417 TIAF1O95411 115 aa11.52□□□□□ -0.56
LIN54-201ENST00000340417 EFEMP2O95967 443 aa11.52□□□□□ -0.56
LIN54-201ENST00000340417 KNG1P01042 644 aa11.52□□□□□ -0.56
LIN54-201ENST00000340417 AMY2AP04746 511 aa11.52□□□□□ -0.56
LIN54-201ENST00000340417 COX6A1P12074 109 aa11.52□□□□□ -0.56
LIN54-201ENST00000340417 SPI1P17947 270 aa11.52□□□□□ -0.56
LIN54-201ENST00000340417 NADK2Q4G0N4 442 aa11.52□□□□□ -0.56
LIN54-201ENST00000340417 BTNL3Q6UXE8 466 aa11.52□□□□□ -0.56
LIN54-201ENST00000340417 VSTM2LQ96N03 204 aa11.52□□□□□ -0.56
LIN54-201ENST00000340417 TMEM43Q9BTV4 400 aa11.52□□□□□ -0.56
LIN54-201ENST00000340417 FAM234AQ9H0X4 552 aa11.52□□□□□ -0.56
LIN54-201ENST00000340417 ABCA7Q8IZY2 2146 aa11.52□□□□□ -0.57
LIN54-201ENST00000340417 SLC33A1O00400 549 aaPredicted RBP11.52□□□□□ -0.57
LIN54-201ENST00000340417 ZNF254O75437 659 aa11.52□□□□□ -0.57
LIN54-201ENST00000340417 LINC00271P0C7V0 271 aa11.52□□□□□ -0.57
LIN54-201ENST00000340417 AKR1C4P17516 323 aa11.52□□□□□ -0.57
LIN54-201ENST00000340417 STOMP27105 288 aa11.52□□□□□ -0.57
LIN54-201ENST00000340417 ZNF141Q15928 474 aa11.52□□□□□ -0.57
LIN54-201ENST00000340417 OR1F12Q8NHA8 337 aa11.52□□□□□ -0.57
LIN54-201ENST00000340417 MUL1Q969V5 352 aa11.52□□□□□ -0.57
LIN54-201ENST00000340417 GFOD1Q9NXC2 390 aa11.52□□□□□ -0.57
LIN54-201ENST00000340417 NTMQ9P121 344 aa11.52□□□□□ -0.57
LIN54-201ENST00000340417 MYOFQ9NZM1 2061 aa11.52□□□□□ -0.57
LIN54-201ENST00000340417 ZNF93P35789 620 aaPredicted RBP11.52□□□□□ -0.57
LIN54-201ENST00000340417 EIF2B2P49770 351 aaKnown RBP11.52□□□□□ -0.57
LIN54-201ENST00000340417 CEBPGP53567 150 aa11.52□□□□□ -0.57
LIN54-201ENST00000340417 TNFAIP6P98066 277 aaPredicted RBP11.52□□□□□ -0.57
LIN54-201ENST00000340417 ZNF620Q6ZNG0 422 aa11.52□□□□□ -0.57
LIN54-201ENST00000340417 GTPBP8Q8N3Z3 284 aaPredicted RBP11.52□□□□□ -0.57
LIN54-201ENST00000340417 TFAP2CQ92754 450 aa11.52□□□□□ -0.57
LIN54-201ENST00000340417 PILRAQ9UKJ1 303 aa11.52□□□□□ -0.57
LIN54-201ENST00000340417 ACOD1A6NK06 481 aa11.52□□□□□ -0.57
LIN54-201ENST00000340417 NRASP01111 189 aa11.52□□□□□ -0.57
LIN54-201ENST00000340417 NTRK2Q16620 822 aa11.52□□□□□ -0.57
LIN54-201ENST00000340417 PXKQ7Z7A4 578 aa11.52□□□□□ -0.57
LIN54-201ENST00000340417 SLC22A24Q8N4F4 322 aa11.52□□□□□ -0.57
LIN54-201ENST00000340417 OR2M3Q8NG83 312 aa11.52□□□□□ -0.57
LIN54-201ENST00000340417 OR56B1Q8NGI3 324 aa11.52□□□□□ -0.57
LIN54-201ENST00000340417 TMEM106AQ96A25 262 aa11.52□□□□□ -0.57
LIN54-201ENST00000340417 EXOSC3Q9NQT5 275 aaKnown RBP11.52□□□□□ -0.57
LIN54-201ENST00000340417 MRPL15Q9P015 296 aaKnown RBP11.52□□□□□ -0.57
LIN54-201ENST00000340417 TMEM8BA6NDV4 472 aa11.51□□□□□ -0.57
LIN54-201ENST00000340417 M0R233 179 aa11.51□□□□□ -0.57
LIN54-201ENST00000340417 MAMSTRQ6ZN01 415 aa11.51□□□□□ -0.57
LIN54-201ENST00000340417 OR4D6Q8NGJ1 314 aa11.51□□□□□ -0.57
LIN54-201ENST00000340417 ELMOD3Q96FG2 381 aa11.51□□□□□ -0.57
LIN54-201ENST00000340417 MYOZ1Q9NP98 299 aaPredicted RBP11.51□□□□□ -0.57
LIN54-201ENST00000340417 MRPL19P49406 292 aaKnown RBP11.51□□□□□ -0.57
LIN54-201ENST00000340417 CBLN3Q6UW01 205 aa11.51□□□□□ -0.57
LIN54-201ENST00000340417 UTS2BQ765I0 119 aa11.51□□□□□ -0.57
LIN54-201ENST00000340417 NOX4Q9NPH5 578 aa11.51□□□□□ -0.57
LIN54-201ENST00000340417 DNAJB6O75190 326 aa11.51□□□□□ -0.57
LIN54-201ENST00000340417 HLA-HP01893 362 aa11.51□□□□□ -0.57
LIN54-201ENST00000340417 EIF4EP06730 217 aaKnown RBP11.51□□□□□ -0.57
LIN54-201ENST00000340417 T-ENOLP0DO92 83 aa11.51□□□□□ -0.57
LIN54-201ENST00000340417 ZNF92Q03936 586 aa11.51□□□□□ -0.57
LIN54-201ENST00000340417 UBE2UQ5VVX9 321 aa11.51□□□□□ -0.57
LIN54-201ENST00000340417 SSX8Q7RTT4 187 aa11.51□□□□□ -0.57
LIN54-201ENST00000340417 SLC36A1Q7Z2H8 476 aa11.51□□□□□ -0.57
LIN54-201ENST00000340417 SCGB1C1Q8TD33 95 aa11.51□□□□□ -0.57
LIN54-201ENST00000340417 TM4SF19Q96DZ7 209 aa11.51□□□□□ -0.57
LIN54-201ENST00000340417 TAS2R8Q9NYW2 309 aa11.51□□□□□ -0.57
LIN54-201ENST00000340417 CNIH1O95406 144 aa11.51□□□□□ -0.57
LIN54-201ENST00000340417 GNAO1P09471 354 aa11.51□□□□□ -0.57
LIN54-201ENST00000340417 AP2S1P53680 142 aaPredicted RBP11.51□□□□□ -0.57
LIN54-201ENST00000340417 EIF5AP63241 154 aaKnown RBP11.51□□□□□ -0.57
LIN54-201ENST00000340417 CATR1Q13166 79 aa11.51□□□□□ -0.57
LIN54-201ENST00000340417 OR2G6Q5TZ20 316 aa11.51□□□□□ -0.57
LIN54-201ENST00000340417 AGAP6Q5VW22 663 aa11.51□□□□□ -0.57
LIN54-201ENST00000340417 OR6Q1Q8NGQ2 317 aa11.51□□□□□ -0.57
LIN54-201ENST00000340417 CHPT1Q8WUD6 406 aa11.51□□□□□ -0.57
LIN54-201ENST00000340417 TSSK2Q96PF2 358 aa11.51□□□□□ -0.57
LIN54-201ENST00000340417 PIGMQ9H3S5 423 aa11.51□□□□□ -0.57
LIN54-201ENST00000340417 RDH8Q9NYR8 311 aa11.51□□□□□ -0.57
LIN54-201ENST00000340417 CDK1P06493 297 aa11.51□□□□□ -0.57
LIN54-201ENST00000340417 VEGFCP49767 419 aa11.51□□□□□ -0.57
LIN54-201ENST00000340417 KCNG3Q8TAE7 436 aa11.51□□□□□ -0.57
LIN54-201ENST00000340417 SLC29A1Q99808 456 aa11.51□□□□□ -0.57
LIN54-201ENST00000340417 ADAT1Q9BUB4 502 aaKnown RBP11.51□□□□□ -0.57
LIN54-201ENST00000340417 BLVRBP30043 206 aaPredicted RBP11.5□□□□□ -0.57
LIN54-201ENST00000340417 CLEC2AQ6UVW9 174 aa11.5□□□□□ -0.57
LIN54-201ENST00000340417 OIT3Q8WWZ8 545 aa11.5□□□□□ -0.57
LIN54-201ENST00000340417 NOX3Q9HBY0 568 aa11.5□□□□□ -0.57
LIN54-201ENST00000340417 ETAA1Q9NY74 926 aa11.5□□□□□ -0.57
LIN54-201ENST00000340417 KIAA1456Q9P272 454 aa11.5□□□□□ -0.57
LIN54-201ENST00000340417 ANKRD61A6NGH8 418 aa11.5□□□□□ -0.57
LIN54-201ENST00000340417 SIRPB1O00241 398 aa11.5□□□□□ -0.57
LIN54-201ENST00000340417 AHCYL1O43865 530 aa11.5□□□□□ -0.57
LIN54-201ENST00000340417 DNASE1P24855 282 aa11.5□□□□□ -0.57
LIN54-201ENST00000340417 DMBX1Q8NFW5 382 aa11.5□□□□□ -0.57
LIN54-201ENST00000340417 OR51F2Q8NH61 342 aa11.5□□□□□ -0.57
LIN54-201ENST00000340417 BEX2Q9BXY8 128 aa11.5□□□□□ -0.57
LIN54-201ENST00000340417 BEX1Q9HBH7 125 aa11.5□□□□□ -0.57
LIN54-201ENST00000340417 HRASLSQ9HDD0 168 aa11.5□□□□□ -0.57
LIN54-201ENST00000340417 ZNF225Q9UK10 706 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms