RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 KRTAP1-3Q8IUG1 177 aa13.15□□□□□ -0.3
UBE3B-201ENST00000340074 SVOPLQ8N434 492 aa13.15□□□□□ -0.3
UBE3B-201ENST00000340074 ICA1LQ8NDH6 482 aa13.15□□□□□ -0.3
UBE3B-201ENST00000340074 PROKR2Q8NFJ6 384 aa13.15□□□□□ -0.3
UBE3B-201ENST00000340074 OR51L1Q8NGJ5 315 aa13.15□□□□□ -0.3
UBE3B-201ENST00000340074 POM121L2Q96KW2 1035 aa13.15□□□□□ -0.3
UBE3B-201ENST00000340074 PKP2Q99959 881 aa13.15□□□□□ -0.3
UBE3B-201ENST00000340074 OAZ3Q9UMX2 235 aa13.15□□□□□ -0.3
UBE3B-201ENST00000340074 POLR1DQ9Y2S0 133 aa13.15□□□□□ -0.3
UBE3B-201ENST00000340074 LHFPL6Q9Y693 200 aa13.15□□□□□ -0.3
UBE3B-201ENST00000340074 FAM183AA6NL82 134 aa13.14□□□□□ -0.31
UBE3B-201ENST00000340074 SGCEO43556 437 aa13.14□□□□□ -0.31
UBE3B-201ENST00000340074 DOK2O60496 412 aa13.14□□□□□ -0.31
UBE3B-201ENST00000340074 MITFO75030 526 aaPredicted RBP13.14□□□□□ -0.31
UBE3B-201ENST00000340074 GDI2P50395 445 aaKnown RBP13.14□□□□□ -0.31
UBE3B-201ENST00000340074 CRISP1P54107 249 aa13.14□□□□□ -0.31
UBE3B-201ENST00000340074 ADAM8P78325 824 aa13.14□□□□□ -0.31
UBE3B-201ENST00000340074 MSMPQ1L6U9 139 aa13.14□□□□□ -0.31
UBE3B-201ENST00000340074 Q5PR19 223 aa13.14□□□□□ -0.31
UBE3B-201ENST00000340074 KDM4DQ6B0I6 523 aa13.14□□□□□ -0.31
UBE3B-201ENST00000340074 CORO6Q6QEF8 472 aa13.14□□□□□ -0.31
UBE3B-201ENST00000340074 VASH1Q7L8A9 365 aaPredicted RBP13.14□□□□□ -0.31
UBE3B-201ENST00000340074 C10orf67Q8IYJ2 551 aa13.14□□□□□ -0.31
UBE3B-201ENST00000340074 PARP8Q8N3A8 854 aa13.14□□□□□ -0.31
UBE3B-201ENST00000340074 OR10H5Q8NGA6 315 aa13.14□□□□□ -0.31
UBE3B-201ENST00000340074 TRMT61AQ96FX7 289 aaKnown RBP13.14□□□□□ -0.31
UBE3B-201ENST00000340074 NMNAT2Q9BZQ4 307 aa13.14□□□□□ -0.31
UBE3B-201ENST00000340074 MED20Q9H944 212 aa13.14□□□□□ -0.31
UBE3B-201ENST00000340074 KRT84Q9NSB2 600 aa13.14□□□□□ -0.31
UBE3B-201ENST00000340074 MRPL22Q9NWU5 206 aaKnown RBP13.14□□□□□ -0.31
UBE3B-201ENST00000340074 PLEK2Q9NYT0 353 aa13.14□□□□□ -0.31
UBE3B-201ENST00000340074 GDF2Q9UK05 429 aaPredicted RBP13.14□□□□□ -0.31
UBE3B-201ENST00000340074 CMAHPQ9Y471 501 aa13.14□□□□□ -0.31
UBE3B-201ENST00000340074 HIVEP1P15822 2718 aa13.14□□□□□ -0.31
UBE3B-201ENST00000340074 SAC3D1A6NKF1 404 aa13.13□□□□□ -0.31
UBE3B-201ENST00000340074 VSTM5A8MXK1 200 aa13.13□□□□□ -0.31
UBE3B-201ENST00000340074 B9A039 149 aa13.13□□□□□ -0.31
UBE3B-201ENST00000340074 RER1O15258 196 aa13.13□□□□□ -0.31
UBE3B-201ENST00000340074 SURF4O15260 269 aa13.13□□□□□ -0.31
UBE3B-201ENST00000340074 NDUFS7O75251 213 aa13.13□□□□□ -0.31
UBE3B-201ENST00000340074 HMGN1P05114 100 aa13.13□□□□□ -0.31
UBE3B-201ENST00000340074 SPI1P17947 270 aa13.13□□□□□ -0.31
UBE3B-201ENST00000340074 PCSK6P29122 969 aa13.13□□□□□ -0.31
UBE3B-201ENST00000340074 HTR5AP47898 357 aa13.13□□□□□ -0.31
UBE3B-201ENST00000340074 SLC25A1P53007 311 aa13.13□□□□□ -0.31
UBE3B-201ENST00000340074 UCP2P55851 309 aa13.13□□□□□ -0.31
UBE3B-201ENST00000340074 EFNB3Q15768 340 aa13.13□□□□□ -0.31
UBE3B-201ENST00000340074 CCDC92Q53HC0 331 aaPredicted RBP13.13□□□□□ -0.31
UBE3B-201ENST00000340074 LYPD4Q6UWN0 246 aa13.13□□□□□ -0.31
UBE3B-201ENST00000340074 LINC00346Q8IVM7 164 aa13.13□□□□□ -0.31
UBE3B-201ENST00000340074 WFDC11Q8NEX6 87 aa13.13□□□□□ -0.31
UBE3B-201ENST00000340074 OTULINQ96BN8 352 aa13.13□□□□□ -0.31
UBE3B-201ENST00000340074 HCAR1Q9BXC0 346 aa13.13□□□□□ -0.31
UBE3B-201ENST00000340074 PLK3Q9H4B4 646 aa13.13□□□□□ -0.31
UBE3B-201ENST00000340074 SLC25A19Q9HC21 320 aa13.13□□□□□ -0.31
UBE3B-201ENST00000340074 S100A14Q9HCY8 104 aa13.13□□□□□ -0.31
UBE3B-201ENST00000340074 FZR1Q9UM11 496 aa13.13□□□□□ -0.31
UBE3B-201ENST00000340074 TMEM129A0AVI4 362 aa13.13□□□□□ -0.31
UBE3B-201ENST00000340074 TVP23AA6NH52 213 aa13.13□□□□□ -0.31
UBE3B-201ENST00000340074 SYNGR3O43761 229 aa13.13□□□□□ -0.31
UBE3B-201ENST00000340074 LCKP06239 509 aa13.13□□□□□ -0.31
UBE3B-201ENST00000340074 COX5BP10606 129 aa13.13□□□□□ -0.31
UBE3B-201ENST00000340074 BMP4P12644 408 aa13.13□□□□□ -0.31
UBE3B-201ENST00000340074 ZNF823P16415 610 aa13.13□□□□□ -0.31
UBE3B-201ENST00000340074 GGT2P36268 569 aa13.13□□□□□ -0.31
UBE3B-201ENST00000340074 WNT5AP41221 380 aa13.13□□□□□ -0.31
UBE3B-201ENST00000340074 RAD52P43351 418 aa13.13□□□□□ -0.31
UBE3B-201ENST00000340074 ERVS71-1P61550 626 aa13.13□□□□□ -0.31
UBE3B-201ENST00000340074 RPS23P62266 143 aaKnown RBP13.13□□□□□ -0.31
UBE3B-201ENST00000340074 SNRPD2P62316 118 aaKnown RBP13.13□□□□□ -0.31
UBE3B-201ENST00000340074 ESRRGP62508 458 aa13.13□□□□□ -0.31
UBE3B-201ENST00000340074 HIST1H3AP68431 136 aa13.13□□□□□ -0.31
UBE3B-201ENST00000340074 GABPB1Q06547 395 aaPredicted RBP13.13□□□□□ -0.31
UBE3B-201ENST00000340074 PTGES3Q15185 160 aaKnown RBP13.13□□□□□ -0.31
UBE3B-201ENST00000340074 HIST2H3PS2Q5TEC6 136 aa13.13□□□□□ -0.31
UBE3B-201ENST00000340074 SHEQ5VZ18 495 aa13.13□□□□□ -0.31
UBE3B-201ENST00000340074 HIST2H3AQ71DI3 136 aa13.13□□□□□ -0.31
UBE3B-201ENST00000340074 ZNF101Q8IZC7 436 aa13.13□□□□□ -0.31
UBE3B-201ENST00000340074 GJC3Q8NFK1 279 aa13.13□□□□□ -0.31
UBE3B-201ENST00000340074 OR6K6Q8NGW6 343 aa13.13□□□□□ -0.31
UBE3B-201ENST00000340074 PTP4A1Q93096 173 aa13.13□□□□□ -0.31
UBE3B-201ENST00000340074 MRPL24Q96A35 216 aaKnown RBP13.13□□□□□ -0.31
UBE3B-201ENST00000340074 CIB1Q99828 191 aa13.13□□□□□ -0.31
UBE3B-201ENST00000340074 CDADC1Q9BWV3 514 aa13.13□□□□□ -0.31
UBE3B-201ENST00000340074 MRPL37Q9BZE1 423 aaKnown RBP13.13□□□□□ -0.31
UBE3B-201ENST00000340074 CYB5R1Q9UHQ9 305 aa13.13□□□□□ -0.31
UBE3B-201ENST00000340074 TMEFF2Q9UIK5 374 aaPredicted RBP13.13□□□□□ -0.31
UBE3B-201ENST00000340074 NDRG4Q9ULP0 352 aaKnown RBP13.13□□□□□ -0.31
UBE3B-201ENST00000340074 PMF1-BGLAPU3KQ54 211 aa13.13□□□□□ -0.31
UBE3B-201ENST00000340074 OR6C6A6NF89 314 aa13.12□□□□□ -0.31
UBE3B-201ENST00000340074 H7C417 338 aa13.12□□□□□ -0.31
UBE3B-201ENST00000340074 IGHV4-39P01824 125 aa13.12□□□□□ -0.31
UBE3B-201ENST00000340074 PAICSP22234 425 aaKnown RBP13.12□□□□□ -0.31
UBE3B-201ENST00000340074 IGFBP5P24593 272 aa13.12□□□□□ -0.31
UBE3B-201ENST00000340074 EPHA2P29317 976 aa13.12□□□□□ -0.31
UBE3B-201ENST00000340074 FMO3P31513 532 aa13.12□□□□□ -0.31
UBE3B-201ENST00000340074 RPS27P42677 84 aaKnown RBP13.12□□□□□ -0.31
UBE3B-201ENST00000340074 PPP2R2BQ00005 443 aa13.12□□□□□ -0.31
UBE3B-201ENST00000340074 RAB35Q15286 201 aa13.12□□□□□ -0.31
UBE3B-201ENST00000340074 ZSCAN26Q16670 478 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms