RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 MS4A18H0YCH9 400 aa15.6■□□□□ 0.09
COL9A1-201ENST00000320755 RAB3DO95716 219 aa15.6■□□□□ 0.09
COL9A1-201ENST00000320755 ZNF28P17035 718 aa15.6■□□□□ 0.09
COL9A1-201ENST00000320755 CRABP1P29762 137 aa15.6■□□□□ 0.09
COL9A1-201ENST00000320755 TLE3Q04726 772 aa15.6■□□□□ 0.09
COL9A1-201ENST00000320755 MS4A18Q3C1V0 323 aa15.6■□□□□ 0.09
COL9A1-201ENST00000320755 GABRG1Q8N1C3 465 aa15.6■□□□□ 0.09
COL9A1-201ENST00000320755 D2HGDHQ8N465 521 aa15.6■□□□□ 0.09
COL9A1-201ENST00000320755 HHLA2Q9UM44 414 aa15.6■□□□□ 0.09
COL9A1-201ENST00000320755 PHF3Q92576 2039 aaKnown RBP15.6■□□□□ 0.09
COL9A1-201ENST00000320755 A0A1W2PPC1 479 aa15.6■□□□□ 0.09
COL9A1-201ENST00000320755 OR2M5A3KFT3 312 aa15.6■□□□□ 0.09
COL9A1-201ENST00000320755 TMEM235A6NFC5 223 aa15.6■□□□□ 0.09
COL9A1-201ENST00000320755 TO15178 435 aa15.6■□□□□ 0.09
COL9A1-201ENST00000320755 OR2T1O43869 369 aa15.6■□□□□ 0.09
COL9A1-201ENST00000320755 AMY2AP04746 511 aa15.6■□□□□ 0.09
COL9A1-201ENST00000320755 BCKDHBP21953 392 aa15.6■□□□□ 0.09
COL9A1-201ENST00000320755 TDGQ13569 410 aa15.6■□□□□ 0.09
COL9A1-201ENST00000320755 IDO2Q6ZQW0 420 aa15.6■□□□□ 0.09
COL9A1-201ENST00000320755 C17orf107Q6ZR85 190 aa15.6■□□□□ 0.09
COL9A1-201ENST00000320755 NUP54Q7Z3B4 507 aa15.6■□□□□ 0.09
COL9A1-201ENST00000320755 SLC38A9Q8NBW4 561 aa15.6■□□□□ 0.09
COL9A1-201ENST00000320755 OR2AK2Q8NG84 335 aa15.6■□□□□ 0.09
COL9A1-201ENST00000320755 OR4S1Q8NGB4 309 aa15.6■□□□□ 0.09
COL9A1-201ENST00000320755 POFUT1Q9H488 388 aa15.6■□□□□ 0.09
COL9A1-201ENST00000320755 OR52A1Q9UKL2 312 aa15.6■□□□□ 0.09
COL9A1-201ENST00000320755 RALGAPA1Q6GYQ0 2036 aa15.6■□□□□ 0.09
COL9A1-201ENST00000320755 SDK2Q58EX2 2172 aa15.59■□□□□ 0.09
COL9A1-201ENST00000320755 ROM1Q03395 351 aa15.59■□□□□ 0.09
COL9A1-201ENST00000320755 FDX2Q6P4F2 183 aa15.59■□□□□ 0.09
COL9A1-201ENST00000320755 GALNT16Q8N428 558 aa15.59■□□□□ 0.09
COL9A1-201ENST00000320755 OIT3Q8WWZ8 545 aa15.59■□□□□ 0.09
COL9A1-201ENST00000320755 CMBLQ96DG6 245 aa15.59■□□□□ 0.09
COL9A1-201ENST00000320755 SEH1LQ96EE3 360 aa15.59■□□□□ 0.09
COL9A1-201ENST00000320755 SLC22A11Q9NSA0 550 aa15.59■□□□□ 0.09
COL9A1-201ENST00000320755 OPN4Q9UHM6 478 aa15.59■□□□□ 0.09
COL9A1-201ENST00000320755 ALOX12BO75342 701 aa15.59■□□□□ 0.09
COL9A1-201ENST00000320755 OR2A4O95047 310 aa15.59■□□□□ 0.09
COL9A1-201ENST00000320755 SEC61A1P61619 476 aaKnown RBP15.59■□□□□ 0.09
COL9A1-201ENST00000320755 AANATQ16613 207 aa15.59■□□□□ 0.09
COL9A1-201ENST00000320755 CD163Q86VB7 1156 aa15.59■□□□□ 0.09
COL9A1-201ENST00000320755 CLEC1AQ8NC01 280 aa15.59■□□□□ 0.09
COL9A1-201ENST00000320755 OR6N1Q8NGY5 312 aa15.59■□□□□ 0.09
COL9A1-201ENST00000320755 OR2A7Q96R45 310 aa15.59■□□□□ 0.09
COL9A1-201ENST00000320755 TRIOBPQ9H2D6 2365 aa15.59■□□□□ 0.09
COL9A1-201ENST00000320755 F5H5P2 479 aa15.59■□□□□ 0.09
COL9A1-201ENST00000320755 FAM69BQ5VUD6 431 aa15.59■□□□□ 0.09
COL9A1-201ENST00000320755 DNM1P46Q6ZS02 220 aa15.59■□□□□ 0.09
COL9A1-201ENST00000320755 CHST4Q8NCG5 386 aa15.59■□□□□ 0.09
COL9A1-201ENST00000320755 TMEM234Q8WY98 164 aa15.59■□□□□ 0.09
COL9A1-201ENST00000320755 SLC25A28Q96A46 364 aa15.59■□□□□ 0.09
COL9A1-201ENST00000320755 FGGYQ96C11 551 aa15.59■□□□□ 0.09
COL9A1-201ENST00000320755 ZNF501Q96CX3 271 aaPredicted RBP15.59■□□□□ 0.09
COL9A1-201ENST00000320755 RAB33BQ9H082 229 aa15.59■□□□□ 0.09
COL9A1-201ENST00000320755 PRMT8Q9NR22 394 aaPredicted RBP15.59■□□□□ 0.09
COL9A1-201ENST00000320755 FBXO4Q9UKT5 387 aa15.59■□□□□ 0.09
COL9A1-201ENST00000320755 ARID1AO14497 2285 aa15.59■□□□□ 0.09
COL9A1-201ENST00000320755 WDFY3Q8IZQ1 3526 aa15.58■□□□□ 0.09
COL9A1-201ENST00000320755 H2BFMP0C1H6 154 aa15.58■□□□□ 0.08
COL9A1-201ENST00000320755 SORDQ00796 357 aa15.58■□□□□ 0.08
COL9A1-201ENST00000320755 INPP5JQ15735 1006 aaPredicted RBP15.58■□□□□ 0.08
COL9A1-201ENST00000320755 CHRNA10Q9GZZ6 450 aa15.58■□□□□ 0.08
COL9A1-201ENST00000320755 APMAPQ9HDC9 416 aa15.58■□□□□ 0.08
COL9A1-201ENST00000320755 HRH3Q9Y5N1 445 aa15.58■□□□□ 0.08
COL9A1-201ENST00000320755 R4GMQ9 66 aa15.58■□□□□ 0.08
COL9A1-201ENST00000320755 CPED1A4D0V7 1026 aa15.58■□□□□ 0.08
COL9A1-201ENST00000320755 EPHA4P54764 986 aa15.58■□□□□ 0.08
COL9A1-201ENST00000320755 DMRTC1Q5HYR2 192 aa15.58■□□□□ 0.08
COL9A1-201ENST00000320755 ZNF441Q8N8Z8 693 aa15.58■□□□□ 0.08
COL9A1-201ENST00000320755 SLC26A10Q8NG04 563 aa15.58■□□□□ 0.08
COL9A1-201ENST00000320755 OR4D6Q8NGJ1 314 aa15.58■□□□□ 0.08
COL9A1-201ENST00000320755 GPX8Q8TED1 209 aa15.58■□□□□ 0.08
COL9A1-201ENST00000320755 UTP23Q9BRU9 249 aaKnown RBP15.58■□□□□ 0.08
COL9A1-201ENST00000320755 SEC61A2Q9H9S3 476 aa15.58■□□□□ 0.08
COL9A1-201ENST00000320755 KLRF1Q9NZS2 232 aa15.58■□□□□ 0.08
COL9A1-201ENST00000320755 FTCDNL1E5RQL4 147 aa15.57■□□□□ 0.08
COL9A1-201ENST00000320755 NUDT21O43809 227 aaKnown RBP15.57■□□□□ 0.08
COL9A1-201ENST00000320755 HEXBP07686 556 aa15.57■□□□□ 0.08
COL9A1-201ENST00000320755 C4BPBP20851 252 aa15.57■□□□□ 0.08
COL9A1-201ENST00000320755 FOXK1P85037 733 aa15.57■□□□□ 0.08
COL9A1-201ENST00000320755 FOXF1Q12946 379 aa15.57■□□□□ 0.08
COL9A1-201ENST00000320755 H1FNTQ75WM6 255 aaPredicted RBP15.57■□□□□ 0.08
COL9A1-201ENST00000320755 SLC38A6Q8IZM9 456 aa15.57■□□□□ 0.08
COL9A1-201ENST00000320755 STK35Q8TDR2 534 aa15.57■□□□□ 0.08
COL9A1-201ENST00000320755 HSPB2A8KAH6 182 aa15.57■□□□□ 0.08
COL9A1-201ENST00000320755 CYB5AP00167 134 aa15.57■□□□□ 0.08
COL9A1-201ENST00000320755 BIDP55957 195 aa15.57■□□□□ 0.08
COL9A1-201ENST00000320755 HSF1Q00613 529 aa15.57■□□□□ 0.08
COL9A1-201ENST00000320755 HLXQ14774 488 aaPredicted RBP15.57■□□□□ 0.08
COL9A1-201ENST00000320755 HSPB2Q16082 182 aa15.57■□□□□ 0.08
COL9A1-201ENST00000320755 FAM166AQ6J272 317 aa15.57■□□□□ 0.08
COL9A1-201ENST00000320755 TSSK4Q6SA08 328 aa15.57■□□□□ 0.08
COL9A1-201ENST00000320755 TMUB2Q71RG4 321 aa15.57■□□□□ 0.08
COL9A1-201ENST00000320755 TMPRSS9Q7Z410 1059 aa15.57■□□□□ 0.08
COL9A1-201ENST00000320755 GPAT4Q86UL3 456 aa15.57■□□□□ 0.08
COL9A1-201ENST00000320755 SPACA5Q96QH8 159 aa15.57■□□□□ 0.08
COL9A1-201ENST00000320755 FBXL2Q9UKC9 423 aa15.57■□□□□ 0.08
COL9A1-201ENST00000320755 SPEF1Q9Y4P9 236 aa15.57■□□□□ 0.08
COL9A1-201ENST00000320755 TIAF1O95411 115 aa15.57■□□□□ 0.08
COL9A1-201ENST00000320755 RRASP10301 218 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms