RNA–Protein interactions for RNA: ENST00000317840.9

COL3A1-202, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2 BASIC

Gene COL3A1, Length 3,873 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-202ENST00000317840 FBXW5Q969U6 566 aa9.49□□□□□ -0.89
COL3A1-202ENST00000317840 JSRP1Q96MG2 331 aaPredicted RBP9.49□□□□□ -0.89
COL3A1-202ENST00000317840 GPER1Q99527 375 aa9.49□□□□□ -0.89
COL3A1-202ENST00000317840 VRK1Q99986 396 aaPredicted RBP9.49□□□□□ -0.89
COL3A1-202ENST00000317840 MFRPQ9BY79 579 aa9.49□□□□□ -0.89
COL3A1-202ENST00000317840 NMNAT2Q9BZQ4 307 aa9.49□□□□□ -0.89
COL3A1-202ENST00000317840 OR2S2Q9NQN1 319 aa9.49□□□□□ -0.89
COL3A1-202ENST00000317840 ZNF275Q9NSD4 429 aaPredicted RBP9.49□□□□□ -0.89
COL3A1-202ENST00000317840 ANKRD10Q9NXR5 420 aa9.49□□□□□ -0.89
COL3A1-202ENST00000317840 MLXQ9UH92 298 aa9.49□□□□□ -0.89
COL3A1-202ENST00000317840 ZNF230Q9UIE0 474 aaPredicted RBP9.49□□□□□ -0.89
COL3A1-202ENST00000317840 NPIPA1Q9UND3 350 aa9.49□□□□□ -0.89
COL3A1-202ENST00000317840 OPN1LWP04000 364 aa9.49□□□□□ -0.89
COL3A1-202ENST00000317840 POU2F2P09086 479 aa9.49□□□□□ -0.89
COL3A1-202ENST00000317840 H2BFMP0C1H6 154 aa9.49□□□□□ -0.89
COL3A1-202ENST00000317840 CD27P26842 260 aa9.49□□□□□ -0.89
COL3A1-202ENST00000317840 CAPZA1P52907 286 aa9.49□□□□□ -0.89
COL3A1-202ENST00000317840 EPHA4P54764 986 aa9.49□□□□□ -0.89
COL3A1-202ENST00000317840 CCINQ13939 588 aa9.49□□□□□ -0.89
COL3A1-202ENST00000317840 ATG4DQ86TL0 474 aaPredicted RBP9.49□□□□□ -0.89
COL3A1-202ENST00000317840 LRRTM1Q86UE6 522 aa9.49□□□□□ -0.89
COL3A1-202ENST00000317840 CDC20BQ86Y33 519 aa9.49□□□□□ -0.89
COL3A1-202ENST00000317840 TMEM41AQ96HV5 264 aa9.49□□□□□ -0.89
COL3A1-202ENST00000317840 COA3Q9Y2R0 106 aaPredicted RBP9.49□□□□□ -0.89
COL3A1-202ENST00000317840 HRH3Q9Y5N1 445 aa9.49□□□□□ -0.89
COL3A1-202ENST00000317840 C2orf72A6NCS6 295 aa9.49□□□□□ -0.89
COL3A1-202ENST00000317840 HMSDA8MTL9 139 aa9.49□□□□□ -0.89
COL3A1-202ENST00000317840 G3V3Q6 166 aa9.49□□□□□ -0.89
COL3A1-202ENST00000317840 DUX1O43812 170 aa9.49□□□□□ -0.89
COL3A1-202ENST00000317840 OR2A4O95047 310 aa9.49□□□□□ -0.89
COL3A1-202ENST00000317840 HOXD4P09016 255 aaPredicted RBP9.49□□□□□ -0.89
COL3A1-202ENST00000317840 CD1CP29017 333 aa9.49□□□□□ -0.89
COL3A1-202ENST00000317840 VWA2Q5GFL6 755 aa9.49□□□□□ -0.89
COL3A1-202ENST00000317840 CLVS2Q5SYC1 327 aa9.49□□□□□ -0.89
COL3A1-202ENST00000317840 CORO6Q6QEF8 472 aa9.49□□□□□ -0.89
COL3A1-202ENST00000317840 STPG2Q8N412 459 aa9.49□□□□□ -0.89
COL3A1-202ENST00000317840 GALNT16Q8N428 558 aa9.49□□□□□ -0.89
COL3A1-202ENST00000317840 LHFPL5Q8TAF8 219 aa9.49□□□□□ -0.89
COL3A1-202ENST00000317840 ST8SIA2Q92186 375 aa9.49□□□□□ -0.89
COL3A1-202ENST00000317840 LRRC46Q96FV0 321 aa9.49□□□□□ -0.89
COL3A1-202ENST00000317840 SCARF2Q96GP6 870 aaPredicted RBP9.49□□□□□ -0.89
COL3A1-202ENST00000317840 OR2A7Q96R45 310 aa9.49□□□□□ -0.89
COL3A1-202ENST00000317840 AIFM2Q9BRQ8 373 aa9.49□□□□□ -0.89
COL3A1-202ENST00000317840 ELL3Q9HB65 397 aaPredicted RBP9.49□□□□□ -0.89
COL3A1-202ENST00000317840 PCDHB16Q9NRJ7 776 aa9.49□□□□□ -0.89
COL3A1-202ENST00000317840 GLS2Q9UI32 602 aa9.49□□□□□ -0.89
COL3A1-202ENST00000317840 KCNMB2Q9Y691 235 aa9.49□□□□□ -0.89
COL3A1-202ENST00000317840 SVILO95425 2214 aa9.49□□□□□ -0.89
COL3A1-202ENST00000317840 TMEM272A0A1B0GTI8 110 aa9.48□□□□□ -0.89
COL3A1-202ENST00000317840 MFSD2BA6NFX1 497 aa9.48□□□□□ -0.89
COL3A1-202ENST00000317840 CD1AP06126 327 aa9.48□□□□□ -0.89
COL3A1-202ENST00000317840 GIMD1P0DJR0 217 aa9.48□□□□□ -0.89
COL3A1-202ENST00000317840 TMEM225Q6GV28 225 aa9.48□□□□□ -0.89
COL3A1-202ENST00000317840 RGS7BPQ6MZT1 257 aaPredicted RBP9.48□□□□□ -0.89
COL3A1-202ENST00000317840 SLC29A4Q7RTT9 530 aa9.48□□□□□ -0.89
COL3A1-202ENST00000317840 SLC22A18ASQ8N1D0 253 aa9.48□□□□□ -0.89
COL3A1-202ENST00000317840 PRSS35Q8N3Z0 413 aa9.48□□□□□ -0.89
COL3A1-202ENST00000317840 OR51A2Q8NGJ7 313 aa9.48□□□□□ -0.89
COL3A1-202ENST00000317840 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.48□□□□□ -0.89
COL3A1-202ENST00000317840 LCORQ96JN0 433 aaPredicted RBP9.48□□□□□ -0.89
COL3A1-202ENST00000317840 SLC41A2Q96JW4 573 aa9.48□□□□□ -0.89
COL3A1-202ENST00000317840 OR8B4Q96RC9 309 aa9.48□□□□□ -0.89
COL3A1-202ENST00000317840 SLC25A21Q9BQT8 299 aaPredicted RBP9.48□□□□□ -0.89
COL3A1-202ENST00000317840 SLC22A23A1A5C7 686 aa9.48□□□□□ -0.89
COL3A1-202ENST00000317840 P2RY10O00398 339 aa9.48□□□□□ -0.89
COL3A1-202ENST00000317840 MPZL1O95297 269 aa9.48□□□□□ -0.89
COL3A1-202ENST00000317840 WNT11O96014 354 aa9.48□□□□□ -0.89
COL3A1-202ENST00000317840 IGHV4-34P06331 123 aa9.48□□□□□ -0.89
COL3A1-202ENST00000317840 HSD17B7P56937 341 aa9.48□□□□□ -0.89
COL3A1-202ENST00000317840 LINC00114Q6XXX2 140 aa9.48□□□□□ -0.89
COL3A1-202ENST00000317840 BVESQ8NE79 360 aa9.48□□□□□ -0.89
COL3A1-202ENST00000317840 ABHD6Q9BV23 337 aa9.48□□□□□ -0.89
COL3A1-202ENST00000317840 C12orf10Q9HB07 376 aa9.48□□□□□ -0.89
COL3A1-202ENST00000317840 TREM1Q9NP99 234 aa9.48□□□□□ -0.89
COL3A1-202ENST00000317840 VDAC3Q9Y277 283 aa9.48□□□□□ -0.89
COL3A1-202ENST00000317840 OR2M5A3KFT3 312 aa9.48□□□□□ -0.89
COL3A1-202ENST00000317840 MEGF11A6BM72 1044 aa9.48□□□□□ -0.89
COL3A1-202ENST00000317840 FAM221BA6H8Z2 402 aa9.48□□□□□ -0.89
COL3A1-202ENST00000317840 A6NCN8 305 aa9.48□□□□□ -0.89
COL3A1-202ENST00000317840 PRR19A6NJB7 356 aa9.48□□□□□ -0.89
COL3A1-202ENST00000317840 H3BML4 177 aa9.48□□□□□ -0.89
COL3A1-202ENST00000317840 FOXS1O43638 330 aa9.48□□□□□ -0.89
COL3A1-202ENST00000317840 ALOX12BO75342 701 aa9.48□□□□□ -0.89
COL3A1-202ENST00000317840 B3GALNT1O75752 331 aa9.48□□□□□ -0.89
COL3A1-202ENST00000317840 NSA2O95478 260 aaKnown RBP9.48□□□□□ -0.89
COL3A1-202ENST00000317840 BCKDHBP21953 392 aa9.48□□□□□ -0.89
COL3A1-202ENST00000317840 KIR3DL2P43630 455 aa9.48□□□□□ -0.89
COL3A1-202ENST00000317840 ARFRP1Q13795 201 aa9.48□□□□□ -0.89
COL3A1-202ENST00000317840 EEF1A1P5Q5VTE0 462 aa9.48□□□□□ -0.89
COL3A1-202ENST00000317840 PAPD4Q6PIY7 484 aaKnown RBP9.48□□□□□ -0.89
COL3A1-202ENST00000317840 SYT13Q7L8C5 426 aa9.48□□□□□ -0.89
COL3A1-202ENST00000317840 OR5M9Q8NGP3 310 aa9.48□□□□□ -0.89
COL3A1-202ENST00000317840 PPP1R1CQ8WVI7 109 aa9.48□□□□□ -0.89
COL3A1-202ENST00000317840 ASB17Q8WXJ9 295 aa9.48□□□□□ -0.89
COL3A1-202ENST00000317840 KIAA1549LQ6ZVL6 1849 aa9.47□□□□□ -0.89
COL3A1-202ENST00000317840 TRAV36DV7A0A075B6V5 113 aa9.47□□□□□ -0.89
COL3A1-202ENST00000317840 IGHV1OR15-9A0A0B4J2B8 117 aa9.47□□□□□ -0.89
COL3A1-202ENST00000317840 A0A0D9SG52 128 aa9.47□□□□□ -0.89
COL3A1-202ENST00000317840 PRSS37A4D1T9 235 aa9.47□□□□□ -0.89
COL3A1-202ENST00000317840 H7C2Y5 167 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms