RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 GMFGO60234 142 aa12.09□□□□□ -0.47
SKA3-202ENST00000314759 HLA-AP01891 365 aaKnown RBP12.09□□□□□ -0.47
SKA3-202ENST00000314759 CLPSP04118 112 aa12.09□□□□□ -0.47
SKA3-202ENST00000314759 CSN2P05814 226 aa12.09□□□□□ -0.47
SKA3-202ENST00000314759 NFYBP25208 207 aa12.09□□□□□ -0.47
SKA3-202ENST00000314759 POLR2GP62487 172 aaKnown RBP eCLIP12.09□□□□□ -0.47
SKA3-202ENST00000314759 TFF2Q03403 129 aa12.09□□□□□ -0.47
SKA3-202ENST00000314759 CCDC157Q569K6 752 aa12.09□□□□□ -0.47
SKA3-202ENST00000314759 C1QL3Q5VWW1 255 aa12.09□□□□□ -0.47
SKA3-202ENST00000314759 LURAP1LQ8IV03 231 aa12.09□□□□□ -0.47
SKA3-202ENST00000314759 AVL9Q8NBF6 648 aa12.09□□□□□ -0.47
SKA3-202ENST00000314759 OR4S1Q8NGB4 309 aa12.09□□□□□ -0.47
SKA3-202ENST00000314759 THAP6Q8TBB0 222 aa12.09□□□□□ -0.47
SKA3-202ENST00000314759 NANPQ8TBE9 248 aa12.09□□□□□ -0.47
SKA3-202ENST00000314759 GLYATL2Q8WU03 294 aa12.09□□□□□ -0.47
SKA3-202ENST00000314759 TCEAL2Q9H3H9 227 aaPredicted RBP12.09□□□□□ -0.47
SKA3-202ENST00000314759 KLK13Q9UKR3 277 aa12.09□□□□□ -0.47
SKA3-202ENST00000314759 MKL2Q9ULH7 1088 aa12.09□□□□□ -0.47
SKA3-202ENST00000314759 C11orf98E9PRG8 122 aa12.09□□□□□ -0.47
SKA3-202ENST00000314759 DOK2O60496 412 aa12.09□□□□□ -0.47
SKA3-202ENST00000314759 CD74P04233 296 aa12.09□□□□□ -0.47
SKA3-202ENST00000314759 DLSTP36957 453 aa12.09□□□□□ -0.47
SKA3-202ENST00000314759 CENPAP49450 140 aa12.09□□□□□ -0.47
SKA3-202ENST00000314759 BLOC1S1P78537 153 aa12.09□□□□□ -0.47
SKA3-202ENST00000314759 PLEKHN1Q494U1 663 aaPredicted RBP12.09□□□□□ -0.47
SKA3-202ENST00000314759 TMEM240Q5SV17 173 aa12.09□□□□□ -0.47
SKA3-202ENST00000314759 DHRS7BQ6IAN0 325 aaPredicted RBP12.09□□□□□ -0.47
SKA3-202ENST00000314759 OR10K2Q6IF99 312 aa12.09□□□□□ -0.47
SKA3-202ENST00000314759 RAB12Q6IQ22 244 aa12.09□□□□□ -0.47
SKA3-202ENST00000314759 MDGA2Q7Z553 956 aa12.09□□□□□ -0.47
SKA3-202ENST00000314759 OR1M1Q8NGA1 313 aa12.09□□□□□ -0.47
SKA3-202ENST00000314759 OR51A2Q8NGJ7 313 aa12.09□□□□□ -0.47
SKA3-202ENST00000314759 FAM174AQ8TBP5 190 aa12.09□□□□□ -0.47
SKA3-202ENST00000314759 SLC37A2Q8TED4 501 aa12.09□□□□□ -0.47
SKA3-202ENST00000314759 SFT2D1Q8WV19 159 aa12.09□□□□□ -0.47
SKA3-202ENST00000314759 ZBTB8AQ96BR9 441 aa12.09□□□□□ -0.47
SKA3-202ENST00000314759 PRMT8Q9NR22 394 aaPredicted RBP12.09□□□□□ -0.47
SKA3-202ENST00000314759 COMMD9Q9P000 198 aa12.09□□□□□ -0.47
SKA3-202ENST00000314759 B9D1Q9UPM9 204 aa12.09□□□□□ -0.47
SKA3-202ENST00000314759 VSIG4Q9Y279 399 aa12.09□□□□□ -0.47
SKA3-202ENST00000314759 DOCK8Q8NF50 2099 aa12.09□□□□□ -0.47
SKA3-202ENST00000314759 DCDC2BA2VCK2 349 aa12.08□□□□□ -0.48
SKA3-202ENST00000314759 ZNF264O43296 627 aa12.08□□□□□ -0.48
SKA3-202ENST00000314759 FADS1O60427 444 aa12.08□□□□□ -0.48
SKA3-202ENST00000314759 CELA2BP08218 269 aaPredicted RBP12.08□□□□□ -0.48
SKA3-202ENST00000314759 ACAA1P09110 424 aaPredicted RBP12.08□□□□□ -0.48
SKA3-202ENST00000314759 ATXN8OSP0DMR3 200 aa12.08□□□□□ -0.48
SKA3-202ENST00000314759 CAPZA1P52907 286 aa12.08□□□□□ -0.48
SKA3-202ENST00000314759 DCDP81605 110 aaKnown RBP12.08□□□□□ -0.48
SKA3-202ENST00000314759 OR7A5Q15622 319 aa12.08□□□□□ -0.48
SKA3-202ENST00000314759 NKPD1Q17RQ9 610 aa12.08□□□□□ -0.48
SKA3-202ENST00000314759 LPCAT3Q6P1A2 487 aa12.08□□□□□ -0.48
SKA3-202ENST00000314759 POMZP3Q6PJE2 187 aa12.08□□□□□ -0.48
SKA3-202ENST00000314759 CORO6Q6QEF8 472 aa12.08□□□□□ -0.48
SKA3-202ENST00000314759 UQCC3Q6UW78 93 aa12.08□□□□□ -0.48
SKA3-202ENST00000314759 TAF8Q7Z7C8 310 aa12.08□□□□□ -0.48
SKA3-202ENST00000314759 ZNF563Q8TA94 476 aa12.08□□□□□ -0.48
SKA3-202ENST00000314759 RXFP4Q8TDU9 374 aa12.08□□□□□ -0.48
SKA3-202ENST00000314759 PAQR8Q8TEZ7 354 aa12.08□□□□□ -0.48
SKA3-202ENST00000314759 GABRG3Q99928 467 aa12.08□□□□□ -0.48
SKA3-202ENST00000314759 MRPL22Q9NWU5 206 aaKnown RBP12.08□□□□□ -0.48
SKA3-202ENST00000314759 MRPS33Q9Y291 106 aaKnown RBP12.08□□□□□ -0.48
SKA3-202ENST00000314759 MEX3AA1L020 520 aaKnown RBP12.08□□□□□ -0.48
SKA3-202ENST00000314759 FAM221BA6H8Z2 402 aa12.08□□□□□ -0.48
SKA3-202ENST00000314759 F5H0A9 414 aaPredicted RBP12.08□□□□□ -0.48
SKA3-202ENST00000314759 CLDN4O14493 209 aa12.08□□□□□ -0.48
SKA3-202ENST00000314759 OR2T1O43869 369 aa12.08□□□□□ -0.48
SKA3-202ENST00000314759 SPARCP09486 303 aa12.08□□□□□ -0.48
SKA3-202ENST00000314759 IGFBP3P17936 291 aaPredicted RBP12.08□□□□□ -0.48
SKA3-202ENST00000314759 TNFRSF4P43489 277 aa12.08□□□□□ -0.48
SKA3-202ENST00000314759 PMPCAQ10713 525 aa12.08□□□□□ -0.48
SKA3-202ENST00000314759 H3F3CQ6NXT2 135 aa12.08□□□□□ -0.48
SKA3-202ENST00000314759 C3orf33Q6P1S2 294 aa12.08□□□□□ -0.48
SKA3-202ENST00000314759 ACOT7LQ6ZUV0 252 aa12.08□□□□□ -0.48
SKA3-202ENST00000314759 CD163Q86VB7 1156 aa12.08□□□□□ -0.48
SKA3-202ENST00000314759 OOSP2Q86WS3 158 aa12.08□□□□□ -0.48
SKA3-202ENST00000314759 CCDC36Q8IYA8 594 aa12.08□□□□□ -0.48
SKA3-202ENST00000314759 BADQ92934 168 aa12.08□□□□□ -0.48
SKA3-202ENST00000314759 PHYHIPLQ96FC7 376 aa12.08□□□□□ -0.48
SKA3-202ENST00000314759 CRB3Q9BUF7 120 aa12.08□□□□□ -0.48
SKA3-202ENST00000314759 RTN4RQ9BZR6 473 aa12.08□□□□□ -0.48
SKA3-202ENST00000314759 SLCO5A1Q9H2Y9 848 aa12.08□□□□□ -0.48
SKA3-202ENST00000314759 GAREM1Q9H706 876 aa12.08□□□□□ -0.48
SKA3-202ENST00000314759 ZNF629Q9UEG4 869 aaPredicted RBP12.08□□□□□ -0.48
SKA3-202ENST00000314759 EDARQ9UNE0 448 aa12.08□□□□□ -0.48
SKA3-202ENST00000314759 PLEKHA6Q9Y2H5 1048 aa12.08□□□□□ -0.48
SKA3-202ENST00000314759 FITM1A5D6W6 292 aa12.07□□□□□ -0.48
SKA3-202ENST00000314759 OR14I1A6ND48 311 aa12.07□□□□□ -0.48
SKA3-202ENST00000314759 TMEM235A6NFC5 223 aa12.07□□□□□ -0.48
SKA3-202ENST00000314759 C17orf51A8MQB3 221 aa12.07□□□□□ -0.48
SKA3-202ENST00000314759 SCDO00767 359 aa12.07□□□□□ -0.48
SKA3-202ENST00000314759 PLGP00747 810 aaPredicted RBP12.07□□□□□ -0.48
SKA3-202ENST00000314759 HOXB2P14652 356 aa12.07□□□□□ -0.48
SKA3-202ENST00000314759 HNRNPA2B1P22626 353 aaKnown RBP12.07□□□□□ -0.48
SKA3-202ENST00000314759 SMAD2Q15796 467 aaKnown RBP12.07□□□□□ -0.48
SKA3-202ENST00000314759 SWI5Q1ZZU3 235 aa12.07□□□□□ -0.48
SKA3-202ENST00000314759 PRTGQ2VWP7 1150 aa12.07□□□□□ -0.48
SKA3-202ENST00000314759 VWA2Q5GFL6 755 aa12.07□□□□□ -0.48
SKA3-202ENST00000314759 FAM209BQ5JX69 171 aa12.07□□□□□ -0.48
SKA3-202ENST00000314759 SLC18B1Q6NT16 456 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms