RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 SPATC1Q76KD6 591 aa8.08□□□□□ -1.12
COL6A5-202ENST00000312481 NUFIP2Q7Z417 695 aaKnown RBP8.08□□□□□ -1.12
COL6A5-202ENST00000312481 MFSD4AQ8N468 514 aa8.08□□□□□ -1.12
COL6A5-202ENST00000312481 OR1E3Q8WZA6 343 aa8.08□□□□□ -1.12
COL6A5-202ENST00000312481 MTFP1Q9UDX5 166 aa8.08□□□□□ -1.12
COL6A5-202ENST00000312481 OR6C6A6NF89 314 aa8.07□□□□□ -1.12
COL6A5-202ENST00000312481 FRG2CA6NGY1 282 aa8.07□□□□□ -1.12
COL6A5-202ENST00000312481 F11P03951 625 aa8.07□□□□□ -1.12
COL6A5-202ENST00000312481 MAKP20794 623 aa8.07□□□□□ -1.12
COL6A5-202ENST00000312481 ERVK-25P63136 954 aa8.07□□□□□ -1.12
COL6A5-202ENST00000312481 NPSR1Q6W5P4 371 aa8.07□□□□□ -1.12
COL6A5-202ENST00000312481 ZNF573Q86YE8 665 aa8.07□□□□□ -1.12
COL6A5-202ENST00000312481 FKBP11Q9NYL4 201 aa8.07□□□□□ -1.12
COL6A5-202ENST00000312481 C2orf72A6NCS6 295 aa8.07□□□□□ -1.12
COL6A5-202ENST00000312481 IL33O95760 270 aa8.07□□□□□ -1.12
COL6A5-202ENST00000312481 RPL17P18621 184 aaKnown RBP8.07□□□□□ -1.12
COL6A5-202ENST00000312481 ADH7P40394 386 aa8.07□□□□□ -1.12
COL6A5-202ENST00000312481 FOLR3P41439 243 aa8.07□□□□□ -1.12
COL6A5-202ENST00000312481 PPP1R8Q12972 351 aaKnown RBP8.07□□□□□ -1.12
COL6A5-202ENST00000312481 AGERQ15109 404 aa8.07□□□□□ -1.12
COL6A5-202ENST00000312481 TMEM184AQ6ZMB5 413 aa8.07□□□□□ -1.12
COL6A5-202ENST00000312481 CTU1Q7Z7A3 348 aaKnown RBP8.07□□□□□ -1.12
COL6A5-202ENST00000312481 LHFPL5Q8TAF8 219 aa8.07□□□□□ -1.12
COL6A5-202ENST00000312481 OR2S2Q9NQN1 319 aa8.07□□□□□ -1.12
COL6A5-202ENST00000312481 STARD5Q9NSY2 213 aa8.07□□□□□ -1.12
COL6A5-202ENST00000312481 A0A1B0GWA3 101 aa8.07□□□□□ -1.12
COL6A5-202ENST00000312481 B4DGG1 531 aa8.07□□□□□ -1.12
COL6A5-202ENST00000312481 FOXB2Q5VYV0 432 aa8.07□□□□□ -1.12
COL6A5-202ENST00000312481 Q7L0L9 218 aa8.07□□□□□ -1.12
COL6A5-202ENST00000312481 OR5AR1Q8NGP9 310 aa8.07□□□□□ -1.12
COL6A5-202ENST00000312481 DAPP1Q9UN19 280 aa8.07□□□□□ -1.12
COL6A5-202ENST00000312481 FPR2P25090 351 aa8.07□□□□□ -1.12
COL6A5-202ENST00000312481 OR2AK2Q8NG84 335 aa8.07□□□□□ -1.12
COL6A5-202ENST00000312481 NEIL1Q96FI4 390 aaPredicted RBP8.07□□□□□ -1.12
COL6A5-202ENST00000312481 ZNF586Q9NXT0 402 aa8.07□□□□□ -1.12
COL6A5-202ENST00000312481 LOC100509620A0A075B734 347 aa8.07□□□□□ -1.12
COL6A5-202ENST00000312481 A0A0A6YYJ9 748 aa8.07□□□□□ -1.12
COL6A5-202ENST00000312481 MDFIC2A0A1B0GVS7 189 aa8.07□□□□□ -1.12
COL6A5-202ENST00000312481 DHRS7CA6NNS2 312 aa8.07□□□□□ -1.12
COL6A5-202ENST00000312481 LILRB5O75023 590 aa8.07□□□□□ -1.12
COL6A5-202ENST00000312481 HLA-DQB1P01920 261 aa8.07□□□□□ -1.12
COL6A5-202ENST00000312481 FBP1P09467 338 aa8.07□□□□□ -1.12
COL6A5-202ENST00000312481 H2AFB1P0C5Y9 115 aa8.07□□□□□ -1.12
COL6A5-202ENST00000312481 ZP2Q05996 745 aa8.07□□□□□ -1.12
COL6A5-202ENST00000312481 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.07□□□□□ -1.12
COL6A5-202ENST00000312481 LYRM7Q5U5X0 104 aa8.07□□□□□ -1.12
COL6A5-202ENST00000312481 PARS2Q7L3T8 475 aaKnown RBP8.07□□□□□ -1.12
COL6A5-202ENST00000312481 LMAN1LQ9HAT1 526 aa8.07□□□□□ -1.12
COL6A5-202ENST00000312481 ACAD8Q9UKU7 415 aa8.07□□□□□ -1.12
COL6A5-202ENST00000312481 FAM166BA8MTA8 275 aa8.07□□□□□ -1.12
COL6A5-202ENST00000312481 ATP5IP56385 69 aaPredicted RBP8.07□□□□□ -1.12
COL6A5-202ENST00000312481 EXOSC6Q5RKV6 272 aaKnown RBP8.07□□□□□ -1.12
COL6A5-202ENST00000312481 ATPAF1Q5TC12 328 aaPredicted RBP8.07□□□□□ -1.12
COL6A5-202ENST00000312481 DCXRQ7Z4W1 244 aa8.07□□□□□ -1.12
COL6A5-202ENST00000312481 MCATQ8IVS2 390 aaKnown RBP8.07□□□□□ -1.12
COL6A5-202ENST00000312481 TMEM40Q8WWA1 233 aa8.07□□□□□ -1.12
COL6A5-202ENST00000312481 MT-ND4P03905 459 aa8.07□□□□□ -1.12
COL6A5-202ENST00000312481 MAP4K2Q12851 820 aa8.07□□□□□ -1.12
COL6A5-202ENST00000312481 SGCAQ16586 387 aa8.07□□□□□ -1.12
COL6A5-202ENST00000312481 C2orf50Q96LR7 162 aa8.07□□□□□ -1.12
COL6A5-202ENST00000312481 EEF1E1-BLOC1S5C9J1V9 151 aa8.06□□□□□ -1.12
COL6A5-202ENST00000312481 WNT11O96014 354 aa8.06□□□□□ -1.12
COL6A5-202ENST00000312481 BTN1A1Q13410 526 aa8.06□□□□□ -1.12
COL6A5-202ENST00000312481 TIGITQ495A1 244 aa8.06□□□□□ -1.12
COL6A5-202ENST00000312481 RPS26P11Q5JNZ5 115 aaPredicted RBP8.06□□□□□ -1.12
COL6A5-202ENST00000312481 C1QTNF12Q5T7M4 302 aa8.06□□□□□ -1.12
COL6A5-202ENST00000312481 JMJD6Q6NYC1 403 aaPredicted RBP8.06□□□□□ -1.12
COL6A5-202ENST00000312481 LSMEM1Q8N8F7 131 aa8.06□□□□□ -1.12
COL6A5-202ENST00000312481 SDF2Q99470 211 aa8.06□□□□□ -1.12
COL6A5-202ENST00000312481 MANBALQ9NQG1 85 aa8.06□□□□□ -1.12
COL6A5-202ENST00000312481 FTSJ1Q9UET6 329 aa8.06□□□□□ -1.12
COL6A5-202ENST00000312481 YTHDF2Q9Y5A9 579 aaKnown RBP8.06□□□□□ -1.12
COL6A5-202ENST00000312481 CADP27708 2225 aa8.06□□□□□ -1.12
COL6A5-202ENST00000312481 A0A1B0GX78 115 aa8.06□□□□□ -1.12
COL6A5-202ENST00000312481 A0A1W2PP55 124 aa8.06□□□□□ -1.12
COL6A5-202ENST00000312481 SMAD6O43541 496 aaKnown RBP8.06□□□□□ -1.12
COL6A5-202ENST00000312481 PIGFQ07326 219 aa8.06□□□□□ -1.12
COL6A5-202ENST00000312481 ELSPBP1Q96BH3 223 aa8.06□□□□□ -1.12
COL6A5-202ENST00000312481 ZNF251Q9BRH9 671 aa8.06□□□□□ -1.12
COL6A5-202ENST00000312481 THAP10Q9P2Z0 257 aaPredicted RBP8.06□□□□□ -1.12
COL6A5-202ENST00000312481 IL20RAQ9UHF4 553 aa8.06□□□□□ -1.12
COL6A5-202ENST00000312481 KCNS2Q9ULS6 477 aa8.06□□□□□ -1.12
COL6A5-202ENST00000312481 LRRC30A6NM36 301 aa8.06□□□□□ -1.12
COL6A5-202ENST00000312481 OR2C1O95371 312 aa8.06□□□□□ -1.12
COL6A5-202ENST00000312481 GAPDHP04406 335 aaKnown RBP8.06□□□□□ -1.12
COL6A5-202ENST00000312481 C8orf89P0DMQ9 161 aa8.06□□□□□ -1.12
COL6A5-202ENST00000312481 CCKARP32238 428 aa8.06□□□□□ -1.12
COL6A5-202ENST00000312481 CD200P41217 278 aa8.06□□□□□ -1.12
COL6A5-202ENST00000312481 SFRP4Q6FHJ7 346 aaPredicted RBP8.06□□□□□ -1.12
COL6A5-202ENST00000312481 HSD11B1LQ7Z5J1 315 aa8.06□□□□□ -1.12
COL6A5-202ENST00000312481 OR13D1Q8NGV5 346 aa8.06□□□□□ -1.12
COL6A5-202ENST00000312481 PAQR8Q8TEZ7 354 aa8.06□□□□□ -1.12
COL6A5-202ENST00000312481 AUTS2Q8WXX7 1259 aa8.06□□□□□ -1.12
COL6A5-202ENST00000312481 LIN37Q96GY3 246 aaPredicted RBP8.06□□□□□ -1.12
COL6A5-202ENST00000312481 VN1R3Q9BXE9 311 aa8.06□□□□□ -1.12
COL6A5-202ENST00000312481 TAS2R16Q9NYV7 291 aa8.06□□□□□ -1.12
COL6A5-202ENST00000312481 C7orf66A4D0T2 115 aa8.06□□□□□ -1.12
COL6A5-202ENST00000312481 SUSD5O60279 629 aa8.06□□□□□ -1.12
COL6A5-202ENST00000312481 CXCL10P02778 98 aa8.06□□□□□ -1.12
COL6A5-202ENST00000312481 ELNP15502 786 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms