RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 GLO1Q04760 184 aa16.88■□□□□ 0.29
PDZRN3-202ENST00000308537 KCNMB1Q16558 191 aa16.88■□□□□ 0.29
PDZRN3-202ENST00000308537 RFX4Q33E94 735 aa16.88■□□□□ 0.29
PDZRN3-202ENST00000308537 C1orf94Q6P1W5 598 aa16.88■□□□□ 0.29
PDZRN3-202ENST00000308537 ADCK1Q86TW2 530 aa16.88■□□□□ 0.29
PDZRN3-202ENST00000308537 FAM53CQ9NYF3 392 aa16.88■□□□□ 0.29
PDZRN3-202ENST00000308537 ACTR3BQ9P1U1 418 aa16.88■□□□□ 0.29
PDZRN3-202ENST00000308537 AURKCQ9UQB9 309 aa16.88■□□□□ 0.29
PDZRN3-202ENST00000308537 WNK2Q9Y3S1 2297 aa16.87■□□□□ 0.29
PDZRN3-202ENST00000308537 OR6C6A6NF89 314 aa16.87■□□□□ 0.29
PDZRN3-202ENST00000308537 ZSCAN5BA6NJL1 495 aa16.87■□□□□ 0.29
PDZRN3-202ENST00000308537 CDH15P55291 814 aa16.87■□□□□ 0.29
PDZRN3-202ENST00000308537 PPP1CBP62140 327 aa16.87■□□□□ 0.29
PDZRN3-202ENST00000308537 LSM6P62312 80 aaKnown RBP16.87■□□□□ 0.29
PDZRN3-202ENST00000308537 HIST1H3AP68431 136 aa16.87■□□□□ 0.29
PDZRN3-202ENST00000308537 CCL8P80075 99 aa16.87■□□□□ 0.29
PDZRN3-202ENST00000308537 MXRA7P84157 204 aa16.87■□□□□ 0.29
PDZRN3-202ENST00000308537 CCDC92Q53HC0 331 aaPredicted RBP16.87■□□□□ 0.29
PDZRN3-202ENST00000308537 SPRNQ5BIV9 151 aa16.87■□□□□ 0.29
PDZRN3-202ENST00000308537 HIST2H3PS2Q5TEC6 136 aa16.87■□□□□ 0.29
PDZRN3-202ENST00000308537 ZNF770Q6IQ21 691 aaPredicted RBP16.87■□□□□ 0.29
PDZRN3-202ENST00000308537 PGBD2Q6P3X8 592 aa16.87■□□□□ 0.29
PDZRN3-202ENST00000308537 CYP2R1Q6VVX0 501 aa16.87■□□□□ 0.29
PDZRN3-202ENST00000308537 HIST2H3AQ71DI3 136 aa16.87■□□□□ 0.29
PDZRN3-202ENST00000308537 ALDH16A1Q8IZ83 802 aa16.87■□□□□ 0.29
PDZRN3-202ENST00000308537 ICA1LQ8NDH6 482 aa16.87■□□□□ 0.29
PDZRN3-202ENST00000308537 OR4C15Q8NGM1 316 aa16.87■□□□□ 0.29
PDZRN3-202ENST00000308537 CLDND2Q8NHS1 167 aa16.87■□□□□ 0.29
PDZRN3-202ENST00000308537 ABHD4Q8TB40 342 aa16.87■□□□□ 0.29
PDZRN3-202ENST00000308537 C4orf45Q96LM5 186 aa16.87■□□□□ 0.29
PDZRN3-202ENST00000308537 BTBD10Q9BSF8 475 aa16.87■□□□□ 0.29
PDZRN3-202ENST00000308537 KCNS2Q9ULS6 477 aa16.87■□□□□ 0.29
PDZRN3-202ENST00000308537 LYVE1Q9Y5Y7 322 aa16.87■□□□□ 0.29
PDZRN3-202ENST00000308537 CACNG2Q9Y698 323 aa16.87■□□□□ 0.29
PDZRN3-202ENST00000308537 B2RBV5 119 aa16.86■□□□□ 0.29
PDZRN3-202ENST00000308537 KHDRBS3O75525 346 aaKnown RBP16.86■□□□□ 0.29
PDZRN3-202ENST00000308537 TGFAP01135 160 aa16.86■□□□□ 0.29
PDZRN3-202ENST00000308537 IGHV1-46P01743 117 aa16.86■□□□□ 0.29
PDZRN3-202ENST00000308537 ADH4P08319 380 aa16.86■□□□□ 0.29
PDZRN3-202ENST00000308537 CRYBB2P43320 205 aa16.86■□□□□ 0.29
PDZRN3-202ENST00000308537 TMEM33P57088 247 aa16.86■□□□□ 0.29
PDZRN3-202ENST00000308537 SMIM11AP58511 58 aa16.86■□□□□ 0.29
PDZRN3-202ENST00000308537 MS4A2Q01362 244 aa16.86■□□□□ 0.29
PDZRN3-202ENST00000308537 SCRN3Q0VDG4 424 aa16.86■□□□□ 0.29
PDZRN3-202ENST00000308537 AQP6Q13520 282 aa16.86■□□□□ 0.29
PDZRN3-202ENST00000308537 PCGF3Q3KNV8 242 aa16.86■□□□□ 0.29
PDZRN3-202ENST00000308537 ZNF718Q3SXZ3 478 aa16.86■□□□□ 0.29
PDZRN3-202ENST00000308537 FAM120AOSQ5T036 256 aa16.86■□□□□ 0.29
PDZRN3-202ENST00000308537 LCN8Q6JVE9 175 aa16.86■□□□□ 0.29
PDZRN3-202ENST00000308537 ZNF620Q6ZNG0 422 aa16.86■□□□□ 0.29
PDZRN3-202ENST00000308537 IL17RELQ6ZVW7 336 aa16.86■□□□□ 0.29
PDZRN3-202ENST00000308537 ZDHHC21Q8IVQ6 265 aa16.86■□□□□ 0.29
PDZRN3-202ENST00000308537 GLB1L2Q8IW92 636 aa16.86■□□□□ 0.29
PDZRN3-202ENST00000308537 FANK1Q8TC84 345 aa16.86■□□□□ 0.29
PDZRN3-202ENST00000308537 SLC7A6Q92536 515 aa16.86■□□□□ 0.29
PDZRN3-202ENST00000308537 DDOQ99489 341 aa16.86■□□□□ 0.29
PDZRN3-202ENST00000308537 TBCCD1Q9NVR7 557 aa16.86■□□□□ 0.29
PDZRN3-202ENST00000308537 ASH2LQ9UBL3 628 aa16.86■□□□□ 0.29
PDZRN3-202ENST00000308537 NDRG4Q9ULP0 352 aaKnown RBP16.86■□□□□ 0.29
PDZRN3-202ENST00000308537 LHFPL6Q9Y693 200 aa16.86■□□□□ 0.29
PDZRN3-202ENST00000308537 H3BSA7 217 aa16.85■□□□□ 0.29
PDZRN3-202ENST00000308537 SGCEO43556 437 aa16.85■□□□□ 0.29
PDZRN3-202ENST00000308537 OR10H3O60404 316 aa16.85■□□□□ 0.29
PDZRN3-202ENST00000308537 DOK2O60496 412 aa16.85■□□□□ 0.29
PDZRN3-202ENST00000308537 HIST1H1CP16403 213 aaKnown RBP16.85■□□□□ 0.29
PDZRN3-202ENST00000308537 GUCA1AP43080 201 aaPredicted RBP16.85■□□□□ 0.29
PDZRN3-202ENST00000308537 GPR6P46095 362 aaPredicted RBP16.85■□□□□ 0.29
PDZRN3-202ENST00000308537 RPS6KA3P51812 740 aa16.85■□□□□ 0.29
PDZRN3-202ENST00000308537 SELENOVP59797 346 aa16.85■□□□□ 0.29
PDZRN3-202ENST00000308537 LMO4P61968 165 aa16.85■□□□□ 0.29
PDZRN3-202ENST00000308537 PSG7Q13046 419 aa16.85■□□□□ 0.29
PDZRN3-202ENST00000308537 CCNIQ14094 377 aa16.85■□□□□ 0.29
PDZRN3-202ENST00000308537 MEP1BQ16820 701 aa16.85■□□□□ 0.29
PDZRN3-202ENST00000308537 RINLQ6ZS11 566 aa16.85■□□□□ 0.29
PDZRN3-202ENST00000308537 CXXC5Q7LFL8 322 aaKnown RBP16.85■□□□□ 0.29
PDZRN3-202ENST00000308537 OR6V1Q8N148 313 aa16.85■□□□□ 0.29
PDZRN3-202ENST00000308537 NSL1Q96IY1 281 aa16.85■□□□□ 0.29
PDZRN3-202ENST00000308537 SAMD8Q96LT4 415 aa16.85■□□□□ 0.29
PDZRN3-202ENST00000308537 ERMAPQ96PL5 475 aaPredicted RBP16.85■□□□□ 0.29
PDZRN3-202ENST00000308537 NMNAT3Q96T66 252 aa16.85■□□□□ 0.29
PDZRN3-202ENST00000308537 NDEL1Q9GZM8 345 aa16.85■□□□□ 0.29
PDZRN3-202ENST00000308537 VNN3Q9NY84 501 aa16.85■□□□□ 0.29
PDZRN3-202ENST00000308537 EIF3KQ9UBQ5 218 aaKnown RBP16.85■□□□□ 0.29
PDZRN3-202ENST00000308537 LPAR3Q9UBY5 353 aa16.85■□□□□ 0.29
PDZRN3-202ENST00000308537 B9D1Q9UPM9 204 aa16.85■□□□□ 0.29
PDZRN3-202ENST00000308537 ARHGAP32A7KAX9 2087 aa16.84■□□□□ 0.29
PDZRN3-202ENST00000308537 FAM157AC9JC47 383 aa16.84■□□□□ 0.29
PDZRN3-202ENST00000308537 RER1O15258 196 aa16.84■□□□□ 0.29
PDZRN3-202ENST00000308537 CDC14BO60729 498 aa16.84■□□□□ 0.29
PDZRN3-202ENST00000308537 HTR5AP47898 357 aa16.84■□□□□ 0.29
PDZRN3-202ENST00000308537 TSPAN31Q12999 210 aa16.84■□□□□ 0.29
PDZRN3-202ENST00000308537 HNRNPA0Q13151 305 aaKnown RBP16.84■□□□□ 0.29
PDZRN3-202ENST00000308537 RSPO1Q2MKA7 263 aaPredicted RBP16.84■□□□□ 0.29
PDZRN3-202ENST00000308537 ZNF362Q5T0B9 420 aaPredicted RBP16.84■□□□□ 0.29
PDZRN3-202ENST00000308537 TMEM154Q6P9G4 183 aa16.84■□□□□ 0.29
PDZRN3-202ENST00000308537 ZBTB46Q86UZ6 589 aa16.84■□□□□ 0.29
PDZRN3-202ENST00000308537 C1orf174Q8IYL3 243 aa16.84■□□□□ 0.29
PDZRN3-202ENST00000308537 LINC01356Q8N9X3 169 aa16.84■□□□□ 0.29
PDZRN3-202ENST00000308537 OR9Q2Q8NGE9 314 aa16.84■□□□□ 0.29
PDZRN3-202ENST00000308537 SNX33Q8WV41 574 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms