RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 CD68P34810 354 aaPredicted RBP9.53□□□□□ -0.88
CLIP1-201ENST00000302528 SLC6A11P48066 632 aa9.53□□□□□ -0.88
CLIP1-201ENST00000302528 RBP2P50120 134 aa9.53□□□□□ -0.88
CLIP1-201ENST00000302528 CCR9P51686 369 aa9.53□□□□□ -0.88
CLIP1-201ENST00000302528 TAGLNQ01995 201 aaKnown RBP9.53□□□□□ -0.88
CLIP1-201ENST00000302528 OXA1LQ15070 435 aa9.53□□□□□ -0.88
CLIP1-201ENST00000302528 ZNF385BQ569K4 471 aa9.53□□□□□ -0.88
CLIP1-201ENST00000302528 RHOUQ7L0Q8 258 aa9.53□□□□□ -0.88
CLIP1-201ENST00000302528 DOK3Q7L591 496 aa9.53□□□□□ -0.88
CLIP1-201ENST00000302528 MAML2Q8IZL2 1156 aaPredicted RBP9.53□□□□□ -0.88
CLIP1-201ENST00000302528 ZNF511Q8NB15 262 aa9.53□□□□□ -0.88
CLIP1-201ENST00000302528 ZFPM2Q8WW38 1151 aa9.53□□□□□ -0.88
CLIP1-201ENST00000302528 GPR45Q9Y5Y3 372 aa9.53□□□□□ -0.88
CLIP1-201ENST00000302528 RGPD5Q99666 1765 aa9.53□□□□□ -0.88
CLIP1-201ENST00000302528 FAM166BA8MTA8 275 aa9.53□□□□□ -0.88
CLIP1-201ENST00000302528 NUDT19A8MXV4 375 aa9.53□□□□□ -0.88
CLIP1-201ENST00000302528 ADAM11O75078 769 aa9.53□□□□□ -0.88
CLIP1-201ENST00000302528 SLC25A4P12235 298 aa9.53□□□□□ -0.88
CLIP1-201ENST00000302528 GLRA1P23415 457 aa9.53□□□□□ -0.88
CLIP1-201ENST00000302528 CD80P33681 288 aa9.53□□□□□ -0.88
CLIP1-201ENST00000302528 LYRM7Q5U5X0 104 aa9.53□□□□□ -0.88
CLIP1-201ENST00000302528 CLEC9AQ6UXN8 241 aa9.53□□□□□ -0.88
CLIP1-201ENST00000302528 AMIGO3Q86WK7 504 aa9.53□□□□□ -0.88
CLIP1-201ENST00000302528 ARHGEF39Q8N4T4 335 aa9.53□□□□□ -0.88
CLIP1-201ENST00000302528 OR13C5Q8NGS8 318 aa9.53□□□□□ -0.88
CLIP1-201ENST00000302528 EGLN2Q96KS0 407 aa9.53□□□□□ -0.88
CLIP1-201ENST00000302528 NOL4LQ96MY1 436 aaPredicted RBP9.53□□□□□ -0.88
CLIP1-201ENST00000302528 INSM2Q96T92 566 aaPredicted RBP9.53□□□□□ -0.88
CLIP1-201ENST00000302528 ZNF2Q9BSG1 426 aaPredicted RBP9.53□□□□□ -0.88
CLIP1-201ENST00000302528 LRFN3Q9BTN0 628 aa9.53□□□□□ -0.88
CLIP1-201ENST00000302528 PRSS21Q9Y6M0 314 aa9.53□□□□□ -0.88
CLIP1-201ENST00000302528 ICMTO60725 284 aa9.53□□□□□ -0.88
CLIP1-201ENST00000302528 IAPPP10997 89 aa9.53□□□□□ -0.88
CLIP1-201ENST00000302528 SRMP19623 302 aa9.53□□□□□ -0.88
CLIP1-201ENST00000302528 ALOX5APP20292 161 aa9.53□□□□□ -0.88
CLIP1-201ENST00000302528 ADRA1AP35348 466 aa9.53□□□□□ -0.88
CLIP1-201ENST00000302528 PRLHRP49683 370 aa9.53□□□□□ -0.88
CLIP1-201ENST00000302528 TPPP2P59282 170 aa9.53□□□□□ -0.88
CLIP1-201ENST00000302528 SLC17A1Q14916 467 aa9.53□□□□□ -0.88
CLIP1-201ENST00000302528 ISG20Q96AZ6 181 aaKnown RBP9.53□□□□□ -0.88
CLIP1-201ENST00000302528 MED18Q9BUE0 208 aa9.53□□□□□ -0.88
CLIP1-201ENST00000302528 C11orf54Q9H0W9 315 aaPredicted RBP9.53□□□□□ -0.88
CLIP1-201ENST00000302528 HCFC1R1Q9NWW0 138 aa9.53□□□□□ -0.88
CLIP1-201ENST00000302528 ASIC5Q9NY37 505 aa9.53□□□□□ -0.88
CLIP1-201ENST00000302528 A0A1B0GWA3 101 aa9.53□□□□□ -0.88
CLIP1-201ENST00000302528 TRIM77I1YAP6 450 aa9.53□□□□□ -0.88
CLIP1-201ENST00000302528 GUSBP08236 651 aa9.53□□□□□ -0.88
CLIP1-201ENST00000302528 GLI4P10075 376 aa9.53□□□□□ -0.88
CLIP1-201ENST00000302528 HTR1FP30939 366 aa9.53□□□□□ -0.88
CLIP1-201ENST00000302528 NHSL2Q5HYW2 709 aa9.53□□□□□ -0.88
CLIP1-201ENST00000302528 ETFRF1Q6IPR1 90 aa9.53□□□□□ -0.88
CLIP1-201ENST00000302528 KIAA1958Q8N8K9 716 aa9.53□□□□□ -0.88
CLIP1-201ENST00000302528 OR51F2Q8NH61 342 aa9.53□□□□□ -0.88
CLIP1-201ENST00000302528 FBXO27Q8NI29 283 aa9.53□□□□□ -0.88
CLIP1-201ENST00000302528 RTP4Q96DX8 246 aa9.53□□□□□ -0.88
CLIP1-201ENST00000302528 CRLF2Q9HC73 371 aa9.53□□□□□ -0.88
CLIP1-201ENST00000302528 PLSCR3Q9NRY6 295 aa9.53□□□□□ -0.88
CLIP1-201ENST00000302528 SLC23A1Q9UHI7 598 aa9.53□□□□□ -0.88
CLIP1-201ENST00000302528 IGHV3-64DA0A0J9YX35 117 aa9.52□□□□□ -0.88
CLIP1-201ENST00000302528 A0A1W2PPQ1 181 aa9.52□□□□□ -0.88
CLIP1-201ENST00000302528 FITM1A5D6W6 292 aa9.52□□□□□ -0.88
CLIP1-201ENST00000302528 RNASEK-C17orf49H0YIS7 233 aa9.52□□□□□ -0.88
CLIP1-201ENST00000302528 POU2F2P09086 479 aa9.52□□□□□ -0.88
CLIP1-201ENST00000302528 ZNF17P17021 662 aa9.52□□□□□ -0.88
CLIP1-201ENST00000302528 CSNK1G2P78368 415 aa9.52□□□□□ -0.88
CLIP1-201ENST00000302528 PIANPQ8IYJ0 282 aa9.52□□□□□ -0.88
CLIP1-201ENST00000302528 SLC39A7Q92504 469 aa9.52□□□□□ -0.88
CLIP1-201ENST00000302528 CTRCQ99895 268 aa9.52□□□□□ -0.88
CLIP1-201ENST00000302528 PLA2G12AQ9BZM1 189 aa9.52□□□□□ -0.88
CLIP1-201ENST00000302528 DHCR7Q9UBM7 475 aaKnown RBP9.52□□□□□ -0.88
CLIP1-201ENST00000302528 N4BP2Q86UW6 1770 aaPredicted RBP9.52□□□□□ -0.89
CLIP1-201ENST00000302528 TO15178 435 aa9.52□□□□□ -0.89
CLIP1-201ENST00000302528 CNMDO75829 334 aa9.52□□□□□ -0.89
CLIP1-201ENST00000302528 MMP7P09237 267 aaPredicted RBP9.52□□□□□ -0.89
CLIP1-201ENST00000302528 HOXC13P31276 330 aa9.52□□□□□ -0.89
CLIP1-201ENST00000302528 OR2AK2Q8NG84 335 aa9.52□□□□□ -0.89
CLIP1-201ENST00000302528 OR5K2Q8NHB8 316 aa9.52□□□□□ -0.89
CLIP1-201ENST00000302528 IER2Q9BTL4 223 aa9.52□□□□□ -0.89
CLIP1-201ENST00000302528 ACOXLQ9NUZ1 547 aa9.52□□□□□ -0.89
CLIP1-201ENST00000302528 GMPR2Q9P2T1 348 aaKnown RBP9.52□□□□□ -0.89
CLIP1-201ENST00000302528 ZNF142P52746 1687 aaPredicted RBP9.52□□□□□ -0.89
CLIP1-201ENST00000302528 CDK2AP1O14519 115 aa9.52□□□□□ -0.89
CLIP1-201ENST00000302528 AQP8O94778 261 aa9.52□□□□□ -0.89
CLIP1-201ENST00000302528 ACSM4P0C7M7 580 aa9.52□□□□□ -0.89
CLIP1-201ENST00000302528 CCKARP32238 428 aa9.52□□□□□ -0.89
CLIP1-201ENST00000302528 CSNK1EP49674 416 aaKnown RBP9.52□□□□□ -0.89
CLIP1-201ENST00000302528 PSMB2P49721 201 aa9.52□□□□□ -0.89
CLIP1-201ENST00000302528 INHBCP55103 352 aa9.52□□□□□ -0.89
CLIP1-201ENST00000302528 NHLH1Q02575 133 aa9.52□□□□□ -0.89
CLIP1-201ENST00000302528 NHLH2Q02577 135 aa9.52□□□□□ -0.89
CLIP1-201ENST00000302528 NCR3LG1Q68D85 454 aa9.52□□□□□ -0.89
CLIP1-201ENST00000302528 MARCH3Q86UD3 253 aa9.52□□□□□ -0.89
CLIP1-201ENST00000302528 WFDC8Q8IUA0 241 aa9.52□□□□□ -0.89
CLIP1-201ENST00000302528 GABRG1Q8N1C3 465 aa9.52□□□□□ -0.89
CLIP1-201ENST00000302528 FAM174AQ8TBP5 190 aa9.52□□□□□ -0.89
CLIP1-201ENST00000302528 EDAQ92838 391 aa9.52□□□□□ -0.89
CLIP1-201ENST00000302528 OR8B4Q96RC9 309 aa9.52□□□□□ -0.89
CLIP1-201ENST00000302528 C16orf70Q9BSU1 422 aa9.52□□□□□ -0.89
CLIP1-201ENST00000302528 TCRBV3S1A0A5B6 114 aa9.52□□□□□ -0.89
CLIP1-201ENST00000302528 SELENOFO60613 162 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms