RNA–Protein interactions for RNA: ENST00000272322.8

VPS54-201, Transcript of VPS54, GARP complex subunit, humanhuman

APPRIS P3 TSL 5 BASIC

Gene VPS54, Length 3,463 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS54-201ENST00000272322 METTL11BQ5VVY1 283 aa14.89□□□□□ -0.03
VPS54-201ENST00000272322 NUDCD2Q8WVJ2 157 aa14.89□□□□□ -0.03
VPS54-201ENST00000272322 CRB3Q9BUF7 120 aa14.89□□□□□ -0.03
VPS54-201ENST00000272322 HEXA-AS1Q9H8Q6 139 aa14.89□□□□□ -0.03
VPS54-201ENST00000272322 IGLV1-36A0A0B4J1U3 117 aa14.89□□□□□ -0.03
VPS54-201ENST00000272322 MS4A18H0YCH9 400 aa14.89□□□□□ -0.03
VPS54-201ENST00000272322 H3BMH7 237 aa14.89□□□□□ -0.03
VPS54-201ENST00000272322 ZNHIT1O43257 154 aa14.89□□□□□ -0.03
VPS54-201ENST00000272322 CXCL2P19875 107 aa14.89□□□□□ -0.03
VPS54-201ENST00000272322 H2BFSP57053 126 aa14.89□□□□□ -0.03
VPS54-201ENST00000272322 MS4A18Q3C1V0 323 aa14.89□□□□□ -0.03
VPS54-201ENST00000272322 APCDD1LQ8NCL9 501 aa14.89□□□□□ -0.03
VPS54-201ENST00000272322 OR10H5Q8NGA6 315 aa14.89□□□□□ -0.03
VPS54-201ENST00000272322 OR4D6Q8NGJ1 314 aa14.89□□□□□ -0.03
VPS54-201ENST00000272322 CASTOR1Q8WTX7 329 aa14.89□□□□□ -0.03
VPS54-201ENST00000272322 FAM71F1Q96KD3 344 aaPredicted RBP14.89□□□□□ -0.03
VPS54-201ENST00000272322 LRFN5Q96NI6 719 aa14.89□□□□□ -0.03
VPS54-201ENST00000272322 XRCC3O43542 346 aa14.88□□□□□ -0.03
VPS54-201ENST00000272322 FADS1O60427 444 aa14.88□□□□□ -0.03
VPS54-201ENST00000272322 EMP2P54851 167 aa14.88□□□□□ -0.03
VPS54-201ENST00000272322 TOR2AQ5JU69 321 aa14.88□□□□□ -0.03
VPS54-201ENST00000272322 IDO2Q6ZQW0 420 aa14.88□□□□□ -0.03
VPS54-201ENST00000272322 ACTR6Q9GZN1 396 aa14.88□□□□□ -0.03
VPS54-201ENST00000272322 RDH8Q9NYR8 311 aa14.88□□□□□ -0.03
VPS54-201ENST00000272322 PPP4R1LQ9P1A2 415 aa14.88□□□□□ -0.03
VPS54-201ENST00000272322 G3V3Q6 166 aa14.88□□□□□ -0.03
VPS54-201ENST00000272322 GSTZ1O43708 216 aaPredicted RBP14.88□□□□□ -0.03
VPS54-201ENST00000272322 SPDEFO95238 335 aa14.88□□□□□ -0.03
VPS54-201ENST00000272322 PNLIPRP2P54317 469 aa14.88□□□□□ -0.03
VPS54-201ENST00000272322 SORDQ00796 357 aa14.88□□□□□ -0.03
VPS54-201ENST00000272322 EGR3Q06889 387 aa14.88□□□□□ -0.03
VPS54-201ENST00000272322 COMMD7Q86VX2 200 aa14.88□□□□□ -0.03
VPS54-201ENST00000272322 D2HGDHQ8N465 521 aa14.88□□□□□ -0.03
VPS54-201ENST00000272322 RBP7Q96R05 134 aa14.88□□□□□ -0.03
VPS54-201ENST00000272322 EXOSC3Q9NQT5 275 aaKnown RBP14.88□□□□□ -0.03
VPS54-201ENST00000272322 OR52A1Q9UKL2 312 aa14.88□□□□□ -0.03
VPS54-201ENST00000272322 NUDT21O43809 227 aaKnown RBP14.87□□□□□ -0.03
VPS54-201ENST00000272322 CALCBP10092 127 aa14.87□□□□□ -0.03
VPS54-201ENST00000272322 ABOP16442 354 aa14.87□□□□□ -0.03
VPS54-201ENST00000272322 SLC26A5P58743 744 aa14.87□□□□□ -0.03
VPS54-201ENST00000272322 OPCMLQ14982 345 aa14.87□□□□□ -0.03
VPS54-201ENST00000272322 GLDNQ6ZMI3 551 aaPredicted RBP14.87□□□□□ -0.03
VPS54-201ENST00000272322 VSX1Q9NZR4 365 aaPredicted RBP14.87□□□□□ -0.03
VPS54-201ENST00000272322 UBE2QL1A1L167 161 aa14.87□□□□□ -0.03
VPS54-201ENST00000272322 NUPL2O15504 423 aaKnown RBP14.87□□□□□ -0.03
VPS54-201ENST00000272322 EFNA2O43921 213 aa14.87□□□□□ -0.03
VPS54-201ENST00000272322 RAB14P61106 215 aa14.87□□□□□ -0.03
VPS54-201ENST00000272322 CCL7P80098 99 aa14.87□□□□□ -0.03
VPS54-201ENST00000272322 HSF1Q00613 529 aa14.87□□□□□ -0.03
VPS54-201ENST00000272322 TAF13Q15543 124 aa14.87□□□□□ -0.03
VPS54-201ENST00000272322 ISXQ2M1V0 245 aa14.87□□□□□ -0.03
VPS54-201ENST00000272322 TMEM176BQ3YBM2 270 aaPredicted RBP14.87□□□□□ -0.03
VPS54-201ENST00000272322 OR52N4Q8NGI2 321 aa14.87□□□□□ -0.03
VPS54-201ENST00000272322 OR52N5Q8NH56 324 aa14.87□□□□□ -0.03
VPS54-201ENST00000272322 RNF128Q8TEB7 428 aa14.87□□□□□ -0.03
VPS54-201ENST00000272322 MCHR2Q969V1 340 aa14.87□□□□□ -0.03
VPS54-201ENST00000272322 A0A1W2PP11 408 aa14.87□□□□□ -0.03
VPS54-201ENST00000272322 ZNF814B7Z6K7 855 aa14.87□□□□□ -0.03
VPS54-201ENST00000272322 RAB3DO95716 219 aa14.87□□□□□ -0.03
VPS54-201ENST00000272322 TXNDC12O95881 172 aa14.87□□□□□ -0.03
VPS54-201ENST00000272322 STEAP1BQ6NZ63 245 aa14.87□□□□□ -0.03
VPS54-201ENST00000272322 COX15Q7KZN9 410 aa14.87□□□□□ -0.03
VPS54-201ENST00000272322 LIX1LQ8IVB5 337 aa14.87□□□□□ -0.03
VPS54-201ENST00000272322 ZNF101Q8IZC7 436 aa14.87□□□□□ -0.03
VPS54-201ENST00000272322 SLC43A2Q8N370 569 aa14.87□□□□□ -0.03
VPS54-201ENST00000272322 PIPOXQ9P0Z9 390 aa14.87□□□□□ -0.03
VPS54-201ENST00000272322 DNAJC13O75165 2243 aa14.87□□□□□ -0.03
VPS54-201ENST00000272322 H7C417 338 aa14.86□□□□□ -0.03
VPS54-201ENST00000272322 TPOP07202 933 aa14.86□□□□□ -0.03
VPS54-201ENST00000272322 CDNFQ49AH0 187 aa14.86□□□□□ -0.03
VPS54-201ENST00000272322 ANKRD16Q6P6B7 361 aa14.86□□□□□ -0.03
VPS54-201ENST00000272322 Q7L0L9 218 aa14.86□□□□□ -0.03
VPS54-201ENST00000272322 RHOUQ7L0Q8 258 aa14.86□□□□□ -0.03
VPS54-201ENST00000272322 EID2Q8N6I1 236 aa14.86□□□□□ -0.03
VPS54-201ENST00000272322 ZNF519Q8TB69 540 aa14.86□□□□□ -0.03
VPS54-201ENST00000272322 C11orf40Q8WZ69 217 aa14.86□□□□□ -0.03
VPS54-201ENST00000272322 GPR137Q96N19 417 aa14.86□□□□□ -0.03
VPS54-201ENST00000272322 POFUT1Q9H488 388 aa14.86□□□□□ -0.03
VPS54-201ENST00000272322 BANF2Q9H503 90 aa14.86□□□□□ -0.03
VPS54-201ENST00000272322 MTFP1Q9UDX5 166 aa14.86□□□□□ -0.03
VPS54-201ENST00000272322 A0A1W2PQM1 296 aa14.86□□□□□ -0.03
VPS54-201ENST00000272322 BLACEA4D250 179 aa14.86□□□□□ -0.03
VPS54-201ENST00000272322 VSTM2BA6NLU5 285 aa14.86□□□□□ -0.03
VPS54-201ENST00000272322 RER1O15258 196 aa14.86□□□□□ -0.03
VPS54-201ENST00000272322 EIF4E2O60573 245 aaKnown RBP14.86□□□□□ -0.03
VPS54-201ENST00000272322 GIMD1P0DJR0 217 aa14.86□□□□□ -0.03
VPS54-201ENST00000272322 MYBPHQ13203 477 aa14.86□□□□□ -0.03
VPS54-201ENST00000272322 CSRP2Q16527 193 aa14.86□□□□□ -0.03
VPS54-201ENST00000272322 EMC4Q5J8M3 183 aa14.86□□□□□ -0.03
VPS54-201ENST00000272322 GLT8D1Q68CQ7 371 aa14.86□□□□□ -0.03
VPS54-201ENST00000272322 PTCRAQ6ISU1 281 aaPredicted RBP14.86□□□□□ -0.03
VPS54-201ENST00000272322 OR51E1Q8TCB6 317 aa14.86□□□□□ -0.03
VPS54-201ENST00000272322 NARFLQ9H6Q4 476 aa14.86□□□□□ -0.03
VPS54-201ENST00000272322 PRDM6Q9NQX0 595 aa14.86□□□□□ -0.03
VPS54-201ENST00000272322 OCIAD1Q9NX40 245 aa14.86□□□□□ -0.03
VPS54-201ENST00000272322 ASH2LQ9UBL3 628 aa14.86□□□□□ -0.03
VPS54-201ENST00000272322 HHLA2Q9UM44 414 aa14.86□□□□□ -0.03
VPS54-201ENST00000272322 PLEKHA6Q9Y2H5 1048 aa14.86□□□□□ -0.03
VPS54-201ENST00000272322 SVILO95425 2214 aa14.86□□□□□ -0.03
VPS54-201ENST00000272322 LOC100289279A0A1B0GTE1 492 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms