RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 CLDN15P56746 228 aa13.98□□□□□ -0.17
TIMP3-201ENST00000266085 EGR3Q06889 387 aa13.98□□□□□ -0.17
TIMP3-201ENST00000266085 EIF3IQ13347 325 aaKnown RBP13.98□□□□□ -0.17
TIMP3-201ENST00000266085 MSMO1Q15800 293 aa13.98□□□□□ -0.17
TIMP3-201ENST00000266085 FBXW12Q6X9E4 464 aa13.98□□□□□ -0.17
TIMP3-201ENST00000266085 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.98□□□□□ -0.17
TIMP3-201ENST00000266085 NAXDQ8IW45 347 aa13.98□□□□□ -0.17
TIMP3-201ENST00000266085 CARFQ8N187 725 aa13.98□□□□□ -0.17
TIMP3-201ENST00000266085 MAFIPQ8WZ33 124 aa13.98□□□□□ -0.17
TIMP3-201ENST00000266085 TIMM10BQ9Y5J6 103 aa13.98□□□□□ -0.17
TIMP3-201ENST00000266085 A0A087WZY1 265 aa13.98□□□□□ -0.17
TIMP3-201ENST00000266085 FITM1A5D6W6 292 aa13.98□□□□□ -0.17
TIMP3-201ENST00000266085 EPOPA6NHQ4 379 aa13.98□□□□□ -0.17
TIMP3-201ENST00000266085 TRIM64CA6NLI5 447 aa13.98□□□□□ -0.17
TIMP3-201ENST00000266085 M0R135 149 aa13.98□□□□□ -0.17
TIMP3-201ENST00000266085 CALCBP10092 127 aa13.98□□□□□ -0.17
TIMP3-201ENST00000266085 TBXA2RP21731 343 aa13.98□□□□□ -0.17
TIMP3-201ENST00000266085 DUSP2Q05923 314 aa13.98□□□□□ -0.17
TIMP3-201ENST00000266085 CATR1Q13166 79 aa13.98□□□□□ -0.17
TIMP3-201ENST00000266085 SARAFQ96BY9 339 aa13.98□□□□□ -0.17
TIMP3-201ENST00000266085 ZNF799Q96GE5 643 aa13.98□□□□□ -0.17
TIMP3-201ENST00000266085 C1QTNF6Q9BXI9 259 aa13.98□□□□□ -0.17
TIMP3-201ENST00000266085 MFRPQ9BY79 579 aa13.98□□□□□ -0.17
TIMP3-201ENST00000266085 PLA2G12AQ9BZM1 189 aa13.98□□□□□ -0.17
TIMP3-201ENST00000266085 PLEKHA3Q9HB20 300 aa13.98□□□□□ -0.17
TIMP3-201ENST00000266085 M0R296 226 aa13.97□□□□□ -0.17
TIMP3-201ENST00000266085 WNT11O96014 354 aa13.97□□□□□ -0.17
TIMP3-201ENST00000266085 SSTR2P30874 369 aa13.97□□□□□ -0.17
TIMP3-201ENST00000266085 IL10RAQ13651 578 aa13.97□□□□□ -0.17
TIMP3-201ENST00000266085 ZIC1Q15915 447 aa13.97□□□□□ -0.17
TIMP3-201ENST00000266085 PRICKLE4Q2TBC4 344 aa13.97□□□□□ -0.17
TIMP3-201ENST00000266085 WDR5BQ86VZ2 330 aa13.97□□□□□ -0.17
TIMP3-201ENST00000266085 CELF2-AS1Q8N7Q2 184 aa13.97□□□□□ -0.17
TIMP3-201ENST00000266085 GPR32P1Q8NGA4 272 aa13.97□□□□□ -0.17
TIMP3-201ENST00000266085 DYNC2LI1Q8TCX1 351 aa13.97□□□□□ -0.17
TIMP3-201ENST00000266085 GON7Q9BXV9 100 aa13.97□□□□□ -0.17
TIMP3-201ENST00000266085 B3GAT1Q9P2W7 334 aa13.97□□□□□ -0.17
TIMP3-201ENST00000266085 SCN3AQ9NY46 2000 aa13.97□□□□□ -0.17
TIMP3-201ENST00000266085 IGHV3-15A0A0B4J1V0 119 aa13.97□□□□□ -0.17
TIMP3-201ENST00000266085 MKRN2OSH3BPM6 223 aa13.97□□□□□ -0.17
TIMP3-201ENST00000266085 POU3F3P20264 500 aaPredicted RBP13.97□□□□□ -0.17
TIMP3-201ENST00000266085 SORDQ00796 357 aa13.97□□□□□ -0.17
TIMP3-201ENST00000266085 PWWP2BQ6NUJ5 590 aa13.97□□□□□ -0.17
TIMP3-201ENST00000266085 TMPRSS11FQ6ZWK6 438 aa13.97□□□□□ -0.17
TIMP3-201ENST00000266085 RDH10Q8IZV5 341 aa13.97□□□□□ -0.17
TIMP3-201ENST00000266085 DEFB124Q8NES8 71 aa13.97□□□□□ -0.17
TIMP3-201ENST00000266085 OR4D9Q8NGE8 314 aa13.97□□□□□ -0.17
TIMP3-201ENST00000266085 KCNE4Q8WWG9 221 aa13.97□□□□□ -0.17
TIMP3-201ENST00000266085 DVL3Q92997 716 aaPredicted RBP13.97□□□□□ -0.17
TIMP3-201ENST00000266085 SIGLEC11Q96RL6 698 aa13.97□□□□□ -0.17
TIMP3-201ENST00000266085 LANCL2Q9NS86 450 aa13.97□□□□□ -0.17
TIMP3-201ENST00000266085 FBXO34Q9NWN3 711 aa13.97□□□□□ -0.17
TIMP3-201ENST00000266085 SIRT5Q9NXA8 310 aa13.97□□□□□ -0.17
TIMP3-201ENST00000266085 TAS2R4Q9NYW5 299 aa13.97□□□□□ -0.17
TIMP3-201ENST00000266085 M0QYG6 137 aa13.97□□□□□ -0.17
TIMP3-201ENST00000266085 S100PP25815 95 aa13.97□□□□□ -0.17
TIMP3-201ENST00000266085 FABP5Q01469 135 aa13.97□□□□□ -0.17
TIMP3-201ENST00000266085 FAPQ12884 760 aa13.97□□□□□ -0.17
TIMP3-201ENST00000266085 LPCAT3Q6P1A2 487 aa13.97□□□□□ -0.17
TIMP3-201ENST00000266085 PRSS45Q7RTY3 260 aa13.97□□□□□ -0.17
TIMP3-201ENST00000266085 COMMD7Q86VX2 200 aa13.97□□□□□ -0.17
TIMP3-201ENST00000266085 DTWD2Q8NBA8 298 aa13.97□□□□□ -0.17
TIMP3-201ENST00000266085 SGK3Q96BR1 496 aa13.97□□□□□ -0.17
TIMP3-201ENST00000266085 KCNG2Q9UJ96 466 aa13.97□□□□□ -0.17
TIMP3-201ENST00000266085 ING1Q9UK53 422 aaPredicted RBP13.97□□□□□ -0.17
TIMP3-201ENST00000266085 ANKRD61A6NGH8 418 aa13.97□□□□□ -0.17
TIMP3-201ENST00000266085 HSPB2A8KAH6 182 aa13.97□□□□□ -0.17
TIMP3-201ENST00000266085 GABARAPH6UMI1 98 aa13.97□□□□□ -0.17
TIMP3-201ENST00000266085 CCR6P51684 374 aa13.97□□□□□ -0.17
TIMP3-201ENST00000266085 HSPB2Q16082 182 aa13.97□□□□□ -0.17
TIMP3-201ENST00000266085 C16orf47Q6ZP98 133 aaPredicted RBP13.97□□□□□ -0.17
TIMP3-201ENST00000266085 RNF170Q96K19 258 aa13.97□□□□□ -0.17
TIMP3-201ENST00000266085 MYOFQ9NZM1 2061 aa13.96□□□□□ -0.17
TIMP3-201ENST00000266085 A0A0B4J2E0 115 aa13.96□□□□□ -0.17
TIMP3-201ENST00000266085 A0A1B0GX12 115 aa13.96□□□□□ -0.17
TIMP3-201ENST00000266085 PRRG2O14669 202 aa13.96□□□□□ -0.17
TIMP3-201ENST00000266085 HRO43593 1189 aa13.96□□□□□ -0.17
TIMP3-201ENST00000266085 GLSO94925 669 aaPredicted RBP13.96□□□□□ -0.17
TIMP3-201ENST00000266085 ELK1P19419 428 aa13.96□□□□□ -0.17
TIMP3-201ENST00000266085 RBP2P50120 134 aa13.96□□□□□ -0.17
TIMP3-201ENST00000266085 ACSM1Q08AH1 577 aa13.96□□□□□ -0.17
TIMP3-201ENST00000266085 AADACL3Q5VUY0 350 aa13.96□□□□□ -0.17
TIMP3-201ENST00000266085 OR52N5Q8NH56 324 aa13.96□□□□□ -0.17
TIMP3-201ENST00000266085 SEC22AQ96IW7 307 aa13.96□□□□□ -0.17
TIMP3-201ENST00000266085 SMIM3Q9BZL3 60 aa13.96□□□□□ -0.17
TIMP3-201ENST00000266085 TDRD15B5MCY1 1934 aaKnown RBP13.96□□□□□ -0.17
TIMP3-201ENST00000266085 MT-CO2P00403 227 aa13.96□□□□□ -0.17
TIMP3-201ENST00000266085 EDN3P14138 238 aa13.96□□□□□ -0.17
TIMP3-201ENST00000266085 ZNF133P52736 654 aaPredicted RBP13.96□□□□□ -0.17
TIMP3-201ENST00000266085 LTC4SQ16873 150 aa13.96□□□□□ -0.17
TIMP3-201ENST00000266085 Q6ZNX1 250 aa13.96□□□□□ -0.17
TIMP3-201ENST00000266085 FCRL1Q96LA6 429 aa13.96□□□□□ -0.17
TIMP3-201ENST00000266085 ZNF681Q96N22 645 aa13.96□□□□□ -0.17
TIMP3-201ENST00000266085 ATF6BQ99941 703 aa13.96□□□□□ -0.17
TIMP3-201ENST00000266085 ABHD6Q9BV23 337 aa13.96□□□□□ -0.17
TIMP3-201ENST00000266085 SLC25A31Q9H0C2 315 aa13.96□□□□□ -0.17
TIMP3-201ENST00000266085 BANF2Q9H503 90 aa13.96□□□□□ -0.17
TIMP3-201ENST00000266085 FBXO7Q9Y3I1 522 aa13.96□□□□□ -0.17
TIMP3-201ENST00000266085 RNF212BA8MTL3 300 aa13.96□□□□□ -0.18
TIMP3-201ENST00000266085 NFYAP23511 347 aaPredicted RBP13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms