RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 C9orf40Q8IXQ3 194 aa8.2□□□□□ -1.1
MSH4-201ENST00000263187 ZNF679Q8IYX0 411 aa8.2□□□□□ -1.1
MSH4-201ENST00000263187 SCARB1Q8WTV0 552 aa8.2□□□□□ -1.1
MSH4-201ENST00000263187 PMM1Q92871 262 aa8.2□□□□□ -1.1
MSH4-201ENST00000263187 GPX7Q96SL4 187 aaPredicted RBP8.2□□□□□ -1.1
MSH4-201ENST00000263187 KIF25Q9UIL4 384 aa8.2□□□□□ -1.1
MSH4-201ENST00000263187 KLK13Q9UKR3 277 aa8.2□□□□□ -1.1
MSH4-201ENST00000263187 TMED7Q9Y3B3 224 aa8.2□□□□□ -1.1
MSH4-201ENST00000263187 RNF215Q9Y6U7 377 aa8.2□□□□□ -1.1
MSH4-201ENST00000263187 TMED7-TICAM2A0A0A6YYA0 188 aa8.19□□□□□ -1.1
MSH4-201ENST00000263187 TRAV14DV4A0A0A6YYC5 116 aa8.19□□□□□ -1.1
MSH4-201ENST00000263187 ZNF736B4DX44 427 aaPredicted RBP8.19□□□□□ -1.1
MSH4-201ENST00000263187 H3BUI4 141 aa8.19□□□□□ -1.1
MSH4-201ENST00000263187 SRPX2O60687 465 aaPredicted RBP8.19□□□□□ -1.1
MSH4-201ENST00000263187 IL33O95760 270 aa8.19□□□□□ -1.1
MSH4-201ENST00000263187 GP1BBP13224 206 aa8.19□□□□□ -1.1
MSH4-201ENST00000263187 GNB3P16520 340 aa8.19□□□□□ -1.1
MSH4-201ENST00000263187 CSRP1P21291 193 aaKnown RBP8.19□□□□□ -1.1
MSH4-201ENST00000263187 RIDAP52758 137 aaKnown RBP8.19□□□□□ -1.1
MSH4-201ENST00000263187 ATP1B3P54709 279 aa8.19□□□□□ -1.1
MSH4-201ENST00000263187 OR1D5P58170 312 aa8.19□□□□□ -1.1
MSH4-201ENST00000263187 MRPS10P82664 201 aaKnown RBP8.19□□□□□ -1.1
MSH4-201ENST00000263187 DHRS2Q13268 280 aa8.19□□□□□ -1.1
MSH4-201ENST00000263187 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.19□□□□□ -1.1
MSH4-201ENST00000263187 FNDC7Q5VTL7 733 aa8.19□□□□□ -1.1
MSH4-201ENST00000263187 RPS4Y2Q8TD47 263 aa8.19□□□□□ -1.1
MSH4-201ENST00000263187 SLC41A2Q96JW4 573 aa8.19□□□□□ -1.1
MSH4-201ENST00000263187 SOX7Q9BT81 388 aa8.19□□□□□ -1.1
MSH4-201ENST00000263187 PDE7BQ9NP56 450 aa8.19□□□□□ -1.1
MSH4-201ENST00000263187 DZANK1Q9NVP4 752 aa8.19□□□□□ -1.1
MSH4-201ENST00000263187 TAS2R3Q9NYW6 316 aa8.19□□□□□ -1.1
MSH4-201ENST00000263187 LHX6Q9UPM6 363 aa8.19□□□□□ -1.1
MSH4-201ENST00000263187 TMEM269A0A1B0GVZ9 245 aa8.19□□□□□ -1.1
MSH4-201ENST00000263187 LOC107986453A0A1B0GWG9 222 aa8.19□□□□□ -1.1
MSH4-201ENST00000263187 OR5H14A6NHG9 310 aa8.19□□□□□ -1.1
MSH4-201ENST00000263187 SLC17A2O00624 439 aa8.19□□□□□ -1.1
MSH4-201ENST00000263187 ZP3P21754 424 aa8.19□□□□□ -1.1
MSH4-201ENST00000263187 RPL27P61353 136 aaKnown RBP8.19□□□□□ -1.1
MSH4-201ENST00000263187 PMPCAQ10713 525 aa8.19□□□□□ -1.1
MSH4-201ENST00000263187 LY6G6FQ5SQ64 297 aa8.19□□□□□ -1.1
MSH4-201ENST00000263187 ATPAF1Q5TC12 328 aaPredicted RBP8.19□□□□□ -1.1
MSH4-201ENST00000263187 CARD17Q5XLA6 110 aa8.19□□□□□ -1.1
MSH4-201ENST00000263187 OR2I1PQ8NGU4 316 aa8.19□□□□□ -1.1
MSH4-201ENST00000263187 ROBO4Q8WZ75 1007 aa8.19□□□□□ -1.1
MSH4-201ENST00000263187 TCTN2Q96GX1 697 aa8.19□□□□□ -1.1
MSH4-201ENST00000263187 CMTM3Q96MX0 182 aa8.19□□□□□ -1.1
MSH4-201ENST00000263187 LRFN5Q96NI6 719 aa8.19□□□□□ -1.1
MSH4-201ENST00000263187 MFRPQ9BY79 579 aa8.19□□□□□ -1.1
MSH4-201ENST00000263187 SLC19A3Q9BZV2 496 aa8.19□□□□□ -1.1
MSH4-201ENST00000263187 CUTCQ9NTM9 273 aa8.19□□□□□ -1.1
MSH4-201ENST00000263187 EPHA6Q9UF33 1036 aa8.19□□□□□ -1.1
MSH4-201ENST00000263187 TMEM14AQ9Y6G1 99 aa8.19□□□□□ -1.1
MSH4-201ENST00000263187 METTL12A8MUP2 240 aa8.18□□□□□ -1.1
MSH4-201ENST00000263187 TRIM77I1YAP6 450 aa8.18□□□□□ -1.1
MSH4-201ENST00000263187 PMP2P02689 132 aa8.18□□□□□ -1.1
MSH4-201ENST00000263187 BGLAPP02818 100 aa8.18□□□□□ -1.1
MSH4-201ENST00000263187 CD1AP06126 327 aa8.18□□□□□ -1.1
MSH4-201ENST00000263187 CD2P06729 351 aa8.18□□□□□ -1.1
MSH4-201ENST00000263187 CD34P28906 385 aa8.18□□□□□ -1.1
MSH4-201ENST00000263187 PPICP45877 212 aa8.18□□□□□ -1.1
MSH4-201ENST00000263187 CAPZBP47756 277 aa8.18□□□□□ -1.1
MSH4-201ENST00000263187 PRKXP51817 358 aa8.18□□□□□ -1.1
MSH4-201ENST00000263187 HSD17B7P56937 341 aa8.18□□□□□ -1.1
MSH4-201ENST00000263187 FOXK1P85037 733 aa8.18□□□□□ -1.1
MSH4-201ENST00000263187 POU3F1Q03052 451 aaPredicted RBP8.18□□□□□ -1.1
MSH4-201ENST00000263187 EGR3Q06889 387 aa8.18□□□□□ -1.1
MSH4-201ENST00000263187 TMEM88Q6PEY1 159 aa8.18□□□□□ -1.1
MSH4-201ENST00000263187 MAMDC2Q7Z304 686 aaPredicted RBP8.18□□□□□ -1.1
MSH4-201ENST00000263187 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.18□□□□□ -1.1
MSH4-201ENST00000263187 EID2Q8N6I1 236 aa8.18□□□□□ -1.1
MSH4-201ENST00000263187 NPRL2Q8WTW4 380 aa8.18□□□□□ -1.1
MSH4-201ENST00000263187 VRK1Q99986 396 aaPredicted RBP8.18□□□□□ -1.1
MSH4-201ENST00000263187 EVA1AQ9H8M9 152 aa8.18□□□□□ -1.1
MSH4-201ENST00000263187 SEC61A2Q9H9S3 476 aa8.18□□□□□ -1.1
MSH4-201ENST00000263187 LANCL2Q9NS86 450 aa8.18□□□□□ -1.1
MSH4-201ENST00000263187 EMC3Q9P0I2 261 aa8.18□□□□□ -1.1
MSH4-201ENST00000263187 THADAQ6YHU6 1953 aa8.18□□□□□ -1.1
MSH4-201ENST00000263187 TRAV36DV7A0A075B6V5 113 aa8.18□□□□□ -1.1
MSH4-201ENST00000263187 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.18□□□□□ -1.1
MSH4-201ENST00000263187 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.18□□□□□ -1.1
MSH4-201ENST00000263187 FAM74A7A6NL05 159 aa8.18□□□□□ -1.1
MSH4-201ENST00000263187 OR5K4A6NMS3 321 aa8.18□□□□□ -1.1
MSH4-201ENST00000263187 ZNF823P16415 610 aa8.18□□□□□ -1.1
MSH4-201ENST00000263187 ABCD3P28288 659 aa8.18□□□□□ -1.1
MSH4-201ENST00000263187 CSF2RBP32927 897 aa8.18□□□□□ -1.1
MSH4-201ENST00000263187 FAM74A3Q4VXF1 159 aa8.18□□□□□ -1.1
MSH4-201ENST00000263187 C1orf140Q5VVS0 124 aa8.18□□□□□ -1.1
MSH4-201ENST00000263187 GLT8D1Q68CQ7 371 aa8.18□□□□□ -1.1
MSH4-201ENST00000263187 TMPPEQ6ZT21 453 aa8.18□□□□□ -1.1
MSH4-201ENST00000263187 TRAPPC6BQ86SZ2 158 aa8.18□□□□□ -1.1
MSH4-201ENST00000263187 CDH26Q8IXH8 852 aa8.18□□□□□ -1.1
MSH4-201ENST00000263187 ADAD2Q8NCV1 583 aaKnown RBP8.18□□□□□ -1.1
MSH4-201ENST00000263187 BVESQ8NE79 360 aa8.18□□□□□ -1.1
MSH4-201ENST00000263187 TMEM185AQ8NFB2 350 aa8.18□□□□□ -1.1
MSH4-201ENST00000263187 OR52N4Q8NGI2 321 aa8.18□□□□□ -1.1
MSH4-201ENST00000263187 OR13C9Q8NGT0 318 aa8.18□□□□□ -1.1
MSH4-201ENST00000263187 ADAMTS18Q8TE60 1221 aa8.18□□□□□ -1.1
MSH4-201ENST00000263187 PPP1R1CQ8WVI7 109 aa8.18□□□□□ -1.1
MSH4-201ENST00000263187 C5orf34Q96MH7 638 aa8.18□□□□□ -1.1
MSH4-201ENST00000263187 DPYSL5Q9BPU6 564 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms