RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 CSRP2Q16527 193 aa10.8□□□□□ -0.68
USHBP1-201ENST00000252597 MANEAQ5SRI9 462 aa10.8□□□□□ -0.68
USHBP1-201ENST00000252597 ZNF585AQ6P3V2 769 aa10.8□□□□□ -0.68
USHBP1-201ENST00000252597 ANKRD16Q6P6B7 361 aa10.8□□□□□ -0.68
USHBP1-201ENST00000252597 TMPPEQ6ZT21 453 aa10.8□□□□□ -0.68
USHBP1-201ENST00000252597 BIVMQ86UB2 503 aa10.8□□□□□ -0.68
USHBP1-201ENST00000252597 CLRN3Q8NCR9 226 aa10.8□□□□□ -0.68
USHBP1-201ENST00000252597 OR6N1Q8NGY5 312 aa10.8□□□□□ -0.68
USHBP1-201ENST00000252597 BAHD1Q8TBE0 780 aaPredicted RBP10.8□□□□□ -0.68
USHBP1-201ENST00000252597 ZNF524Q96C55 264 aa10.8□□□□□ -0.68
USHBP1-201ENST00000252597 GAS2L1Q99501 681 aaPredicted RBP10.8□□□□□ -0.68
USHBP1-201ENST00000252597 C12orf57Q99622 126 aa10.8□□□□□ -0.68
USHBP1-201ENST00000252597 CMSS1Q9BQ75 279 aaKnown RBP10.8□□□□□ -0.68
USHBP1-201ENST00000252597 C20orf24Q9BUV8 137 aa10.8□□□□□ -0.68
USHBP1-201ENST00000252597 LDAHQ9H6V9 325 aa10.8□□□□□ -0.68
USHBP1-201ENST00000252597 MMP25Q9NPA2 562 aa10.8□□□□□ -0.68
USHBP1-201ENST00000252597 PLXNA2O75051 1894 aa10.8□□□□□ -0.68
USHBP1-201ENST00000252597 A0A0J9YY10 115 aa10.79□□□□□ -0.68
USHBP1-201ENST00000252597 TMEM212A6NML5 194 aa10.79□□□□□ -0.68
USHBP1-201ENST00000252597 ZNF264O43296 627 aa10.79□□□□□ -0.68
USHBP1-201ENST00000252597 SULT1B1O43704 296 aa10.79□□□□□ -0.68
USHBP1-201ENST00000252597 MPIG6BO95866 241 aa10.79□□□□□ -0.68
USHBP1-201ENST00000252597 SERPINA5P05154 406 aa10.79□□□□□ -0.68
USHBP1-201ENST00000252597 HRH1P35367 487 aa10.79□□□□□ -0.68
USHBP1-201ENST00000252597 ATPAF1Q5TC12 328 aaPredicted RBP10.79□□□□□ -0.68
USHBP1-201ENST00000252597 WBP2NLQ6ICG8 309 aa10.79□□□□□ -0.68
USHBP1-201ENST00000252597 CLEC9AQ6UXN8 241 aa10.79□□□□□ -0.68
USHBP1-201ENST00000252597 ZSCAN1Q8NBB4 408 aa10.79□□□□□ -0.68
USHBP1-201ENST00000252597 MARCH1Q8TCQ1 289 aa10.79□□□□□ -0.68
USHBP1-201ENST00000252597 C4orf45Q96LM5 186 aa10.79□□□□□ -0.68
USHBP1-201ENST00000252597 DCBLD2Q96PD2 775 aa10.79□□□□□ -0.68
USHBP1-201ENST00000252597 ST6GALNAC5Q9BVH7 336 aa10.79□□□□□ -0.68
USHBP1-201ENST00000252597 MED29Q9NX70 200 aa10.79□□□□□ -0.68
USHBP1-201ENST00000252597 EDARQ9UNE0 448 aa10.79□□□□□ -0.68
USHBP1-201ENST00000252597 MRPS18BQ9Y676 258 aaKnown RBP10.79□□□□□ -0.68
USHBP1-201ENST00000252597 DOCK8Q8NF50 2099 aa10.79□□□□□ -0.68
USHBP1-201ENST00000252597 A0A087WV62 115 aa10.79□□□□□ -0.68
USHBP1-201ENST00000252597 TO15178 435 aa10.79□□□□□ -0.68
USHBP1-201ENST00000252597 ADAP1O75689 374 aa10.79□□□□□ -0.68
USHBP1-201ENST00000252597 OR2A4O95047 310 aa10.79□□□□□ -0.68
USHBP1-201ENST00000252597 ZNF205O95201 554 aa10.79□□□□□ -0.68
USHBP1-201ENST00000252597 UTS2O95399 124 aa10.79□□□□□ -0.68
USHBP1-201ENST00000252597 IL5P05113 134 aa10.79□□□□□ -0.68
USHBP1-201ENST00000252597 GAAP10253 952 aa10.79□□□□□ -0.68
USHBP1-201ENST00000252597 CTLA4P16410 223 aa10.79□□□□□ -0.68
USHBP1-201ENST00000252597 ALOX5APP20292 161 aa10.79□□□□□ -0.68
USHBP1-201ENST00000252597 CNR1P21554 472 aa10.79□□□□□ -0.68
USHBP1-201ENST00000252597 NME2P22392 152 aa10.79□□□□□ -0.68
USHBP1-201ENST00000252597 RBM34P42696 430 aaKnown RBP10.79□□□□□ -0.68
USHBP1-201ENST00000252597 RAB38P57729 211 aa10.79□□□□□ -0.68
USHBP1-201ENST00000252597 PMPCAQ10713 525 aa10.79□□□□□ -0.68
USHBP1-201ENST00000252597 SLC18B1Q6NT16 456 aa10.79□□□□□ -0.68
USHBP1-201ENST00000252597 PAPD4Q6PIY7 484 aaKnown RBP10.79□□□□□ -0.68
USHBP1-201ENST00000252597 FJX1Q86VR8 437 aa10.79□□□□□ -0.68
USHBP1-201ENST00000252597 FAM71F1Q96KD3 344 aaPredicted RBP10.79□□□□□ -0.68
USHBP1-201ENST00000252597 OR2A7Q96R45 310 aa10.79□□□□□ -0.68
USHBP1-201ENST00000252597 EXOSC3Q9NQT5 275 aaKnown RBP10.79□□□□□ -0.68
USHBP1-201ENST00000252597 CYP8B1Q9UNU6 501 aa10.79□□□□□ -0.68
USHBP1-201ENST00000252597 KNTC1P50748 2209 aa10.79□□□□□ -0.68
USHBP1-201ENST00000252597 IGKV1D-42A0A075B6H8 117 aa10.79□□□□□ -0.68
USHBP1-201ENST00000252597 LOC101059948A0A1B0GTJ6 334 aa10.79□□□□□ -0.68
USHBP1-201ENST00000252597 GPR89AB7ZAQ6 455 aa10.79□□□□□ -0.68
USHBP1-201ENST00000252597 ICOSLGO75144 302 aa10.79□□□□□ -0.68
USHBP1-201ENST00000252597 B3GALNT1O75752 331 aa10.79□□□□□ -0.68
USHBP1-201ENST00000252597 GPR89BP0CG08 455 aa10.79□□□□□ -0.68
USHBP1-201ENST00000252597 FGL1Q08830 312 aa10.79□□□□□ -0.68
USHBP1-201ENST00000252597 CEBPEQ15744 281 aa10.79□□□□□ -0.68
USHBP1-201ENST00000252597 SLC36A1Q7Z2H8 476 aa10.79□□□□□ -0.68
USHBP1-201ENST00000252597 DCXRQ7Z4W1 244 aa10.79□□□□□ -0.68
USHBP1-201ENST00000252597 SPAG16Q8N0X2 631 aa10.79□□□□□ -0.68
USHBP1-201ENST00000252597 ADAD2Q8NCV1 583 aaKnown RBP10.79□□□□□ -0.68
USHBP1-201ENST00000252597 MARVELD3Q96A59 401 aa10.79□□□□□ -0.68
USHBP1-201ENST00000252597 SEH1LQ96EE3 360 aa10.79□□□□□ -0.68
USHBP1-201ENST00000252597 VSTM2LQ96N03 204 aa10.79□□□□□ -0.68
USHBP1-201ENST00000252597 CSAG2Q9Y5P2 127 aa10.79□□□□□ -0.68
USHBP1-201ENST00000252597 TCRBV21S2A2A0A5A6 115 aa10.78□□□□□ -0.68
USHBP1-201ENST00000252597 RFPL4AA6NLU0 287 aa10.78□□□□□ -0.68
USHBP1-201ENST00000252597 RFPL4AL1F8VTS6 287 aa10.78□□□□□ -0.68
USHBP1-201ENST00000252597 STK17BO94768 372 aa10.78□□□□□ -0.68
USHBP1-201ENST00000252597 FGF2P09038 288 aa10.78□□□□□ -0.68
USHBP1-201ENST00000252597 MYF5P13349 255 aa10.78□□□□□ -0.68
USHBP1-201ENST00000252597 HLA-DOBP13765 273 aa10.78□□□□□ -0.68
USHBP1-201ENST00000252597 RPS4Y1P22090 263 aaKnown RBP10.78□□□□□ -0.68
USHBP1-201ENST00000252597 KCNJ3P48549 501 aa10.78□□□□□ -0.68
USHBP1-201ENST00000252597 PRSS12P56730 875 aa10.78□□□□□ -0.68
USHBP1-201ENST00000252597 SRSF3P84103 164 aaKnown RBP10.78□□□□□ -0.68
USHBP1-201ENST00000252597 SERTAD2Q14140 314 aa10.78□□□□□ -0.68
USHBP1-201ENST00000252597 CCDC157Q569K6 752 aa10.78□□□□□ -0.68
USHBP1-201ENST00000252597 TMEM225Q6GV28 225 aa10.78□□□□□ -0.68
USHBP1-201ENST00000252597 FAM180AQ6UWF9 173 aa10.78□□□□□ -0.68
USHBP1-201ENST00000252597 UNQ9370/PRO34162Q6UXP9 181 aa10.78□□□□□ -0.68
USHBP1-201ENST00000252597 PUSL1Q8N0Z8 303 aaKnown RBP10.78□□□□□ -0.68
USHBP1-201ENST00000252597 ZNF248Q8NDW4 579 aa10.78□□□□□ -0.68
USHBP1-201ENST00000252597 NUBPLQ8TB37 319 aa10.78□□□□□ -0.68
USHBP1-201ENST00000252597 NT5CQ8TCD5 201 aa10.78□□□□□ -0.68
USHBP1-201ENST00000252597 CRB3Q9BUF7 120 aa10.78□□□□□ -0.68
USHBP1-201ENST00000252597 LYRM4Q9HD34 91 aa10.78□□□□□ -0.68
USHBP1-201ENST00000252597 UBQLN4Q9NRR5 601 aa10.78□□□□□ -0.68
USHBP1-201ENST00000252597 ETV7Q9Y603 341 aa10.78□□□□□ -0.68
USHBP1-201ENST00000252597 ZNF106Q9H2Y7 1883 aaKnown RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms