RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 DNASE2BQ8WZ79 361 aa12.9□□□□□ -0.34
HIF3A-202ENST00000244303 PNPLA2Q96AD5 504 aa12.9□□□□□ -0.34
HIF3A-202ENST00000244303 SLC25A44Q96H78 314 aaPredicted RBP12.9□□□□□ -0.34
HIF3A-202ENST00000244303 CKLFQ9UBR5 152 aa12.9□□□□□ -0.34
HIF3A-202ENST00000244303 GOSR2O14653 212 aa12.9□□□□□ -0.35
HIF3A-202ENST00000244303 ADAM10O14672 748 aa12.9□□□□□ -0.35
HIF3A-202ENST00000244303 BCAT2O15382 392 aaPredicted RBP12.9□□□□□ -0.35
HIF3A-202ENST00000244303 ZNF35P13682 527 aa12.9□□□□□ -0.35
HIF3A-202ENST00000244303 IGFBP3P17936 291 aaPredicted RBP12.9□□□□□ -0.35
HIF3A-202ENST00000244303 RIPPLY1Q0D2K3 151 aa12.9□□□□□ -0.35
HIF3A-202ENST00000244303 D2HGDHQ8N465 521 aa12.9□□□□□ -0.35
HIF3A-202ENST00000244303 OR51A2Q8NGJ7 313 aa12.9□□□□□ -0.35
HIF3A-202ENST00000244303 STK35Q8TDR2 534 aa12.9□□□□□ -0.35
HIF3A-202ENST00000244303 CHST6Q9GZX3 395 aa12.9□□□□□ -0.35
HIF3A-202ENST00000244303 PRMT8Q9NR22 394 aaPredicted RBP12.9□□□□□ -0.35
HIF3A-202ENST00000244303 CTSFQ9UBX1 484 aa12.9□□□□□ -0.35
HIF3A-202ENST00000244303 EMC9Q9Y3B6 208 aa12.9□□□□□ -0.35
HIF3A-202ENST00000244303 MRPS18BQ9Y676 258 aaKnown RBP12.9□□□□□ -0.35
HIF3A-202ENST00000244303 PHF3Q92576 2039 aaKnown RBP12.89□□□□□ -0.35
HIF3A-202ENST00000244303 IGHV3-20A0A0C4DH32 117 aa12.89□□□□□ -0.35
HIF3A-202ENST00000244303 A0A1B0GX78 115 aa12.89□□□□□ -0.35
HIF3A-202ENST00000244303 C2orf72A6NCS6 295 aa12.89□□□□□ -0.35
HIF3A-202ENST00000244303 OR6C76A6NM76 312 aa12.89□□□□□ -0.35
HIF3A-202ENST00000244303 FTCDNL1E5RQL4 147 aa12.89□□□□□ -0.35
HIF3A-202ENST00000244303 BET1O15155 118 aa12.89□□□□□ -0.35
HIF3A-202ENST00000244303 ARPC5O15511 151 aa12.89□□□□□ -0.35
HIF3A-202ENST00000244303 DUX1O43812 170 aa12.89□□□□□ -0.35
HIF3A-202ENST00000244303 SRSF10O75494 262 aaKnown RBP12.89□□□□□ -0.35
HIF3A-202ENST00000244303 HOXD4P09016 255 aaPredicted RBP12.89□□□□□ -0.35
HIF3A-202ENST00000244303 CRABP1P29762 137 aa12.89□□□□□ -0.35
HIF3A-202ENST00000244303 SEC61A1P61619 476 aaKnown RBP12.89□□□□□ -0.35
HIF3A-202ENST00000244303 FMODQ06828 376 aa12.89□□□□□ -0.35
HIF3A-202ENST00000244303 BTN1A1Q13410 526 aa12.89□□□□□ -0.35
HIF3A-202ENST00000244303 SQSTM1Q13501 440 aa12.89□□□□□ -0.35
HIF3A-202ENST00000244303 SFRP5Q5T4F7 317 aa12.89□□□□□ -0.35
HIF3A-202ENST00000244303 DCAF12L2Q5VW00 463 aa12.89□□□□□ -0.35
HIF3A-202ENST00000244303 TMEM205Q6UW68 189 aa12.89□□□□□ -0.35
HIF3A-202ENST00000244303 ZNF627Q7L945 461 aa12.89□□□□□ -0.35
HIF3A-202ENST00000244303 CARFQ8N187 725 aa12.89□□□□□ -0.35
HIF3A-202ENST00000244303 LHFPL5Q8TAF8 219 aa12.89□□□□□ -0.35
HIF3A-202ENST00000244303 SLC41A2Q96JW4 573 aa12.89□□□□□ -0.35
HIF3A-202ENST00000244303 C1QTNF6Q9BXI9 259 aa12.89□□□□□ -0.35
HIF3A-202ENST00000244303 EXO5Q9H790 373 aa12.89□□□□□ -0.35
HIF3A-202ENST00000244303 APMAPQ9HDC9 416 aa12.89□□□□□ -0.35
HIF3A-202ENST00000244303 TMEM138Q9NPI0 162 aa12.89□□□□□ -0.35
HIF3A-202ENST00000244303 SDHAF2Q9NX18 166 aa12.89□□□□□ -0.35
HIF3A-202ENST00000244303 ARPC4-TTLL3A0A0A6YYG9 625 aa12.88□□□□□ -0.35
HIF3A-202ENST00000244303 DCDC2BA2VCK2 349 aa12.88□□□□□ -0.35
HIF3A-202ENST00000244303 OR2T1O43869 369 aa12.88□□□□□ -0.35
HIF3A-202ENST00000244303 FSTP19883 344 aa12.88□□□□□ -0.35
HIF3A-202ENST00000244303 AFF3P51826 1226 aaKnown RBP12.88□□□□□ -0.35
HIF3A-202ENST00000244303 ACTBP60709 375 aa12.88□□□□□ -0.35
HIF3A-202ENST00000244303 ACTG1P63261 375 aa12.88□□□□□ -0.35
HIF3A-202ENST00000244303 BAMBIQ13145 260 aa12.88□□□□□ -0.35
HIF3A-202ENST00000244303 LINC00346Q8IVM7 164 aa12.88□□□□□ -0.35
HIF3A-202ENST00000244303 WDFY1Q8IWB7 410 aa12.88□□□□□ -0.35
HIF3A-202ENST00000244303 GABRG1Q8N1C3 465 aa12.88□□□□□ -0.35
HIF3A-202ENST00000244303 ZNF454Q8N9F8 522 aa12.88□□□□□ -0.35
HIF3A-202ENST00000244303 OR13C3Q8NGS6 347 aa12.88□□□□□ -0.35
HIF3A-202ENST00000244303 TNFAIP8L1Q8WVP5 186 aa12.88□□□□□ -0.35
HIF3A-202ENST00000244303 SEH1LQ96EE3 360 aa12.88□□□□□ -0.35
HIF3A-202ENST00000244303 LINC00052Q96N35 136 aa12.88□□□□□ -0.35
HIF3A-202ENST00000244303 AIFM2Q9BRQ8 373 aa12.88□□□□□ -0.35
HIF3A-202ENST00000244303 MYEF2Q9P2K5 600 aaKnown RBP12.88□□□□□ -0.35
HIF3A-202ENST00000244303 R4GMQ9 66 aa12.88□□□□□ -0.35
HIF3A-202ENST00000244303 TUBAL3A6NHL2 446 aa12.88□□□□□ -0.35
HIF3A-202ENST00000244303 OR6C65A6NJZ3 312 aa12.88□□□□□ -0.35
HIF3A-202ENST00000244303 F5H5P2 479 aa12.88□□□□□ -0.35
HIF3A-202ENST00000244303 MS4A18H0YCH9 400 aa12.88□□□□□ -0.35
HIF3A-202ENST00000244303 GIMD1P0DJR0 217 aa12.88□□□□□ -0.35
HIF3A-202ENST00000244303 GLB1P16278 677 aa12.88□□□□□ -0.35
HIF3A-202ENST00000244303 POU3F2P20265 443 aaPredicted RBP12.88□□□□□ -0.35
HIF3A-202ENST00000244303 ZP3P21754 424 aa12.88□□□□□ -0.35
HIF3A-202ENST00000244303 S100A11P31949 105 aa12.88□□□□□ -0.35
HIF3A-202ENST00000244303 NUP62P37198 522 aaPredicted RBP12.88□□□□□ -0.35
HIF3A-202ENST00000244303 SSBP1Q04837 148 aaKnown RBP12.88□□□□□ -0.35
HIF3A-202ENST00000244303 SPOCK1Q08629 439 aa12.88□□□□□ -0.35
HIF3A-202ENST00000244303 TOMM20Q15388 145 aa12.88□□□□□ -0.35
HIF3A-202ENST00000244303 MS4A18Q3C1V0 323 aa12.88□□□□□ -0.35
HIF3A-202ENST00000244303 C4orf46Q504U0 113 aa12.88□□□□□ -0.35
HIF3A-202ENST00000244303 FAM122CQ6P4D5 195 aa12.88□□□□□ -0.35
HIF3A-202ENST00000244303 LRFN4Q6PJG9 635 aa12.88□□□□□ -0.35
HIF3A-202ENST00000244303 DCXRQ7Z4W1 244 aa12.88□□□□□ -0.35
HIF3A-202ENST00000244303 ZBTB44Q8NCP5 570 aa12.88□□□□□ -0.35
HIF3A-202ENST00000244303 ZNF248Q8NDW4 579 aa12.88□□□□□ -0.35
HIF3A-202ENST00000244303 ARL5BQ96KC2 179 aa12.88□□□□□ -0.35
HIF3A-202ENST00000244303 G6PC2Q9NQR9 355 aa12.88□□□□□ -0.35
HIF3A-202ENST00000244303 HHLA2Q9UM44 414 aa12.88□□□□□ -0.35
HIF3A-202ENST00000244303 SDK1Q7Z5N4 2213 aa12.87□□□□□ -0.35
HIF3A-202ENST00000244303 FXYD6-FXYD2A0A087WZ82 144 aa12.87□□□□□ -0.35
HIF3A-202ENST00000244303 LOC107986453A0A1B0GWG9 222 aa12.87□□□□□ -0.35
HIF3A-202ENST00000244303 K7ESF4 209 aa12.87□□□□□ -0.35
HIF3A-202ENST00000244303 LMX1BO60663 402 aa12.87□□□□□ -0.35
HIF3A-202ENST00000244303 LPLP06858 475 aa12.87□□□□□ -0.35
HIF3A-202ENST00000244303 ZNF823P16415 610 aa12.87□□□□□ -0.35
HIF3A-202ENST00000244303 CXCL12P48061 93 aa12.87□□□□□ -0.35
HIF3A-202ENST00000244303 DNASE1L1P49184 302 aa12.87□□□□□ -0.35
HIF3A-202ENST00000244303 TAS2R19P59542 299 aa12.87□□□□□ -0.35
HIF3A-202ENST00000244303 RNF4P78317 190 aa12.87□□□□□ -0.35
HIF3A-202ENST00000244303 HLXQ14774 488 aaPredicted RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms