RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 HMGN3Q15651 99 aa12.13□□□□□ -0.47
NEK9-201ENST00000238616 EXD3Q8N9H8 876 aa12.13□□□□□ -0.47
NEK9-201ENST00000238616 TMEM255BQ8WV15 326 aa12.13□□□□□ -0.47
NEK9-201ENST00000238616 ISG20Q96AZ6 181 aaKnown RBP12.13□□□□□ -0.47
NEK9-201ENST00000238616 NXF2Q9GZY0 626 aaKnown RBP12.13□□□□□ -0.47
NEK9-201ENST00000238616 ATRXP46100 2492 aa12.13□□□□□ -0.47
NEK9-201ENST00000238616 COL3A1P02461 1466 aaPredicted RBP12.13□□□□□ -0.47
NEK9-201ENST00000238616 IGKV3-7A0A075B6H7 116 aa12.13□□□□□ -0.47
NEK9-201ENST00000238616 PTBP3O95758 552 aaKnown RBP12.13□□□□□ -0.47
NEK9-201ENST00000238616 IAPPP10997 89 aa12.13□□□□□ -0.47
NEK9-201ENST00000238616 ADRA1AP35348 466 aa12.13□□□□□ -0.47
NEK9-201ENST00000238616 CCR6P51684 374 aa12.13□□□□□ -0.47
NEK9-201ENST00000238616 CLEC12BQ2HXU8 276 aa12.13□□□□□ -0.47
NEK9-201ENST00000238616 CXorf67Q86X51 503 aaPredicted RBP12.13□□□□□ -0.47
NEK9-201ENST00000238616 PARP16Q8N5Y8 322 aa12.13□□□□□ -0.47
NEK9-201ENST00000238616 NPEPL1Q8NDH3 523 aa12.13□□□□□ -0.47
NEK9-201ENST00000238616 GHSRQ92847 366 aa12.13□□□□□ -0.47
NEK9-201ENST00000238616 RSRP1Q9BUV0 290 aa12.13□□□□□ -0.47
NEK9-201ENST00000238616 ASIC5Q9NY37 505 aa12.13□□□□□ -0.47
NEK9-201ENST00000238616 CGGBP1Q9UFW8 167 aaPredicted RBP12.13□□□□□ -0.47
NEK9-201ENST00000238616 HIST2H3AQ71DI3 136 aa12.13□□□□□ -0.47
NEK9-201ENST00000238616 TCTE3Q8IZS6 198 aa12.13□□□□□ -0.47
NEK9-201ENST00000238616 KCNG3Q8TAE7 436 aa12.13□□□□□ -0.47
NEK9-201ENST00000238616 CCDC74AQ96AQ1 378 aa12.13□□□□□ -0.47
NEK9-201ENST00000238616 A0A1B0GTW7 788 aa12.13□□□□□ -0.47
NEK9-201ENST00000238616 B3GNT8Q7Z7M8 397 aa12.13□□□□□ -0.47
NEK9-201ENST00000238616 INPP5EQ9NRR6 644 aa12.13□□□□□ -0.47
NEK9-201ENST00000238616 PPT2Q9UMR5 302 aa12.13□□□□□ -0.47
NEK9-201ENST00000238616 CBY3A6NI87 242 aa12.13□□□□□ -0.47
NEK9-201ENST00000238616 ARHGAP33O14559 1287 aa12.13□□□□□ -0.47
NEK9-201ENST00000238616 GATCO43716 136 aaKnown RBP12.13□□□□□ -0.47
NEK9-201ENST00000238616 IRS1P35568 1242 aa12.13□□□□□ -0.47
NEK9-201ENST00000238616 PCBP3P57721 371 aaKnown RBP12.13□□□□□ -0.47
NEK9-201ENST00000238616 ASTLQ6HA08 431 aaPredicted RBP12.13□□□□□ -0.47
NEK9-201ENST00000238616 C17orf78Q8N4C9 275 aa12.13□□□□□ -0.47
NEK9-201ENST00000238616 NHLRC2Q8NBF2 726 aa12.13□□□□□ -0.47
NEK9-201ENST00000238616 MFSD9Q8NBP5 474 aa12.13□□□□□ -0.47
NEK9-201ENST00000238616 ACY3Q96HD9 319 aa12.13□□□□□ -0.47
NEK9-201ENST00000238616 ZNF724A8MTY0 619 aa12.13□□□□□ -0.47
NEK9-201ENST00000238616 DCTN6O00399 190 aa12.13□□□□□ -0.47
NEK9-201ENST00000238616 ERVFC1P60507 584 aa12.13□□□□□ -0.47
NEK9-201ENST00000238616 C20orf85Q9H1P6 137 aa12.13□□□□□ -0.47
NEK9-201ENST00000238616 FBXO8Q9NRD0 319 aa12.13□□□□□ -0.47
NEK9-201ENST00000238616 FAM90A27PA6NNH2 459 aa12.12□□□□□ -0.47
NEK9-201ENST00000238616 ZNF385BQ569K4 471 aa12.12□□□□□ -0.47
NEK9-201ENST00000238616 FRMPD2BQ6IN97 320 aa12.12□□□□□ -0.47
NEK9-201ENST00000238616 TFAP2EQ6VUC0 442 aa12.12□□□□□ -0.47
NEK9-201ENST00000238616 TMIGD2Q96BF3 282 aa12.12□□□□□ -0.47
NEK9-201ENST00000238616 GPR78Q96P69 363 aa12.12□□□□□ -0.47
NEK9-201ENST00000238616 MENTQ9BUN1 341 aa12.12□□□□□ -0.47
NEK9-201ENST00000238616 TUBB1Q9H4B7 451 aa12.12□□□□□ -0.47
NEK9-201ENST00000238616 SLC22A11Q9NSA0 550 aa12.12□□□□□ -0.47
NEK9-201ENST00000238616 ACOXLQ9NUZ1 547 aa12.12□□□□□ -0.47
NEK9-201ENST00000238616 SNED1Q8TER0 1413 aa12.12□□□□□ -0.47
NEK9-201ENST00000238616 LOC100289279A0A1B0GTE1 492 aa12.12□□□□□ -0.47
NEK9-201ENST00000238616 A0A1B0GX78 115 aa12.12□□□□□ -0.47
NEK9-201ENST00000238616 LY86O95711 162 aa12.12□□□□□ -0.47
NEK9-201ENST00000238616 SMUG1Q53HV7 270 aa12.12□□□□□ -0.47
NEK9-201ENST00000238616 MDGA2Q7Z553 956 aa12.12□□□□□ -0.47
NEK9-201ENST00000238616 KCNRGQ8N5I3 272 aa12.12□□□□□ -0.47
NEK9-201ENST00000238616 PRR7Q8TB68 274 aa12.12□□□□□ -0.47
NEK9-201ENST00000238616 SMAP2Q8WU79 429 aaPredicted RBP12.12□□□□□ -0.47
NEK9-201ENST00000238616 PLPPR2Q96GM1 343 aa12.12□□□□□ -0.47
NEK9-201ENST00000238616 TCF20Q9UGU0 1960 aaKnown RBP12.12□□□□□ -0.47
NEK9-201ENST00000238616 TRAV36DV7A0A075B6V5 113 aa12.12□□□□□ -0.47
NEK9-201ENST00000238616 GIPRP48546 466 aa12.12□□□□□ -0.47
NEK9-201ENST00000238616 AVPI1Q5T686 147 aa12.12□□□□□ -0.47
NEK9-201ENST00000238616 LGI3Q8N145 548 aa12.12□□□□□ -0.47
NEK9-201ENST00000238616 ZNF596Q8TC21 504 aa12.12□□□□□ -0.47
NEK9-201ENST00000238616 SLC46A1Q96NT5 459 aa12.12□□□□□ -0.47
NEK9-201ENST00000238616 RGPD4Q7Z3J3 1758 aa12.12□□□□□ -0.47
NEK9-201ENST00000238616 DMRTC1Q5HYR2 192 aa12.12□□□□□ -0.47
NEK9-201ENST00000238616 FBXL14Q8N1E6 418 aa12.12□□□□□ -0.47
NEK9-201ENST00000238616 C8orf44Q96CB5 159 aa12.12□□□□□ -0.47
NEK9-201ENST00000238616 PRR14Q9BWN1 585 aa12.12□□□□□ -0.47
NEK9-201ENST00000238616 KLF16Q9BXK1 252 aaPredicted RBP12.12□□□□□ -0.47
NEK9-201ENST00000238616 COMMD5Q9GZQ3 224 aa12.12□□□□□ -0.47
NEK9-201ENST00000238616 TLCD2A6NGC4 264 aa12.12□□□□□ -0.47
NEK9-201ENST00000238616 DUSP1P28562 367 aa12.12□□□□□ -0.47
NEK9-201ENST00000238616 CPZQ66K79 652 aa12.12□□□□□ -0.47
NEK9-201ENST00000238616 LACC1Q8IV20 430 aa12.12□□□□□ -0.47
NEK9-201ENST00000238616 OR2Z1Q8NG97 314 aa12.12□□□□□ -0.47
NEK9-201ENST00000238616 YIPF5Q969M3 257 aa12.12□□□□□ -0.47
NEK9-201ENST00000238616 HINT3Q9NQE9 182 aaKnown RBP12.12□□□□□ -0.47
NEK9-201ENST00000238616 OR6C68A6NDL8 312 aa12.12□□□□□ -0.47
NEK9-201ENST00000238616 C1SP09871 688 aa12.12□□□□□ -0.47
NEK9-201ENST00000238616 BCL6P41182 706 aa12.12□□□□□ -0.47
NEK9-201ENST00000238616 GNG10P50151 68 aa12.12□□□□□ -0.47
NEK9-201ENST00000238616 GPM6AP51674 278 aa12.12□□□□□ -0.47
NEK9-201ENST00000238616 GAMTQ14353 236 aa12.12□□□□□ -0.47
NEK9-201ENST00000238616 HTR3DQ70Z44 454 aa12.12□□□□□ -0.47
NEK9-201ENST00000238616 CMBLQ96DG6 245 aa12.12□□□□□ -0.47
NEK9-201ENST00000238616 NRIP3Q9NQ35 241 aa12.12□□□□□ -0.47
NEK9-201ENST00000238616 DNPH1O43598 174 aa12.11□□□□□ -0.47
NEK9-201ENST00000238616 CNR1P21554 472 aa12.11□□□□□ -0.47
NEK9-201ENST00000238616 AOAHP28039 575 aa12.11□□□□□ -0.47
NEK9-201ENST00000238616 YPEL5P62699 121 aa12.11□□□□□ -0.47
NEK9-201ENST00000238616 PRSS45Q7RTY3 260 aa12.11□□□□□ -0.47
NEK9-201ENST00000238616 L3MBTL4Q8NA19 623 aa12.11□□□□□ -0.47
NEK9-201ENST00000238616 SLC24A4Q8NFF2 622 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms