RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 RPL11P62913 178 aaKnown RBP16.76■□□□□ 0.27
CLIP2-201ENST00000223398 ANKRD9Q96BM1 317 aaPredicted RBP16.76■□□□□ 0.27
CLIP2-201ENST00000223398 IER2Q9BTL4 223 aa16.76■□□□□ 0.27
CLIP2-201ENST00000223398 LOC100289279A0A1B0GTE1 492 aa16.76■□□□□ 0.27
CLIP2-201ENST00000223398 FITM1A5D6W6 292 aa16.76■□□□□ 0.27
CLIP2-201ENST00000223398 CDAP32320 146 aa16.76■□□□□ 0.27
CLIP2-201ENST00000223398 DSCR4P56555 118 aaPredicted RBP16.76■□□□□ 0.27
CLIP2-201ENST00000223398 CMPK2Q5EBM0 449 aa16.76■□□□□ 0.27
CLIP2-201ENST00000223398 SLC43A2Q8N370 569 aa16.76■□□□□ 0.27
CLIP2-201ENST00000223398 OR6M1Q8NGM8 313 aa16.76■□□□□ 0.27
CLIP2-201ENST00000223398 KIAA1551Q9HCM1 1747 aa16.76■□□□□ 0.27
CLIP2-201ENST00000223398 LGALS8O00214 317 aa16.76■□□□□ 0.27
CLIP2-201ENST00000223398 FBXO24O75426 580 aa16.76■□□□□ 0.27
CLIP2-201ENST00000223398 CHRNB1P11230 501 aa16.76■□□□□ 0.27
CLIP2-201ENST00000223398 ABCD3P28288 659 aa16.76■□□□□ 0.27
CLIP2-201ENST00000223398 PWWP2BQ6NUJ5 590 aa16.76■□□□□ 0.27
CLIP2-201ENST00000223398 WDR5BQ86VZ2 330 aa16.76■□□□□ 0.27
CLIP2-201ENST00000223398 RBMXL3Q8N7X1 1067 aaKnown RBP16.76■□□□□ 0.27
CLIP2-201ENST00000223398 KCNJ15Q99712 375 aa16.76■□□□□ 0.27
CLIP2-201ENST00000223398 EXO1Q9UQ84 846 aaKnown RBP16.76■□□□□ 0.27
CLIP2-201ENST00000223398 SBK3P0C264 359 aa16.76■□□□□ 0.27
CLIP2-201ENST00000223398 SORDQ00796 357 aa16.76■□□□□ 0.27
CLIP2-201ENST00000223398 NKAIN3Q8N8D7 197 aa16.76■□□□□ 0.27
CLIP2-201ENST00000223398 ST7LQ8TDW4 575 aa16.76■□□□□ 0.27
CLIP2-201ENST00000223398 PRDM7Q9NQW5 492 aa16.76■□□□□ 0.27
CLIP2-201ENST00000223398 OR2A25A4D2G3 310 aa16.75■□□□□ 0.27
CLIP2-201ENST00000223398 RAB6AP20340 208 aa16.75■□□□□ 0.27
CLIP2-201ENST00000223398 ETV1P50549 477 aa16.75■□□□□ 0.27
CLIP2-201ENST00000223398 SUMF1Q8NBK3 374 aa16.75■□□□□ 0.27
CLIP2-201ENST00000223398 STK35Q8TDR2 534 aa16.75■□□□□ 0.27
CLIP2-201ENST00000223398 TTC9Q92623 222 aa16.75■□□□□ 0.27
CLIP2-201ENST00000223398 ERVMER34-1Q9H9K5 563 aa16.75■□□□□ 0.27
CLIP2-201ENST00000223398 GPR84Q9NQS5 396 aa16.75■□□□□ 0.27
CLIP2-201ENST00000223398 RAB22AQ9UL26 194 aa16.75■□□□□ 0.27
CLIP2-201ENST00000223398 PRSS37A4D1T9 235 aa16.75■□□□□ 0.27
CLIP2-201ENST00000223398 NAGAP17050 411 aa16.75■□□□□ 0.27
CLIP2-201ENST00000223398 BMP5P22003 454 aa16.75■□□□□ 0.27
CLIP2-201ENST00000223398 NPY4RP50391 375 aa16.75■□□□□ 0.27
CLIP2-201ENST00000223398 AMER3Q8N944 861 aa16.75■□□□□ 0.27
CLIP2-201ENST00000223398 AKR7LQ8NHP1 331 aa16.75■□□□□ 0.27
CLIP2-201ENST00000223398 SOD1P00441 154 aa16.75■□□□□ 0.27
CLIP2-201ENST00000223398 SSTR2P30874 369 aa16.75■□□□□ 0.27
CLIP2-201ENST00000223398 OR52N1Q8NH53 320 aa16.75■□□□□ 0.27
CLIP2-201ENST00000223398 NARFLQ9H6Q4 476 aa16.75■□□□□ 0.27
CLIP2-201ENST00000223398 CPNE5Q9HCH3 593 aa16.75■□□□□ 0.27
CLIP2-201ENST00000223398 B3GALT5Q9Y2C3 310 aa16.75■□□□□ 0.27
CLIP2-201ENST00000223398 MSTNO14793 375 aa16.75■□□□□ 0.27
CLIP2-201ENST00000223398 GALEQ14376 348 aa16.75■□□□□ 0.27
CLIP2-201ENST00000223398 CEACAM16Q2WEN9 425 aa16.75■□□□□ 0.27
CLIP2-201ENST00000223398 OVCH1Q7RTY7 1134 aa16.75■□□□□ 0.27
CLIP2-201ENST00000223398 REEP6Q96HR9 211 aa16.75■□□□□ 0.27
CLIP2-201ENST00000223398 OCIAD1Q9NX40 245 aa16.75■□□□□ 0.27
CLIP2-201ENST00000223398 SDHBP21912 280 aa16.75■□□□□ 0.27
CLIP2-201ENST00000223398 ACHEP22303 614 aa16.75■□□□□ 0.27
CLIP2-201ENST00000223398 MFGE8Q08431 387 aaPredicted RBP16.75■□□□□ 0.27
CLIP2-201ENST00000223398 ACER2Q5QJU3 275 aa16.75■□□□□ 0.27
CLIP2-201ENST00000223398 OR51H1Q8NH63 302 aa16.75■□□□□ 0.27
CLIP2-201ENST00000223398 NRTNQ99748 197 aa16.75■□□□□ 0.27
CLIP2-201ENST00000223398 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.75■□□□□ 0.27
CLIP2-201ENST00000223398 CMC2Q9NRP2 79 aa16.75■□□□□ 0.27
CLIP2-201ENST00000223398 A0A087WZY1 265 aa16.74■□□□□ 0.27
CLIP2-201ENST00000223398 APEX1P27695 318 aaKnown RBP16.74■□□□□ 0.27
CLIP2-201ENST00000223398 RBMS2Q15434 407 aaKnown RBP16.74■□□□□ 0.27
CLIP2-201ENST00000223398 ZNF793Q6ZN11 406 aa16.74■□□□□ 0.27
CLIP2-201ENST00000223398 ATF6BQ99941 703 aa16.74■□□□□ 0.27
CLIP2-201ENST00000223398 MEIOCA2RUB1 952 aa16.74■□□□□ 0.27
CLIP2-201ENST00000223398 LIMS2Q7Z4I7 341 aa16.74■□□□□ 0.27
CLIP2-201ENST00000223398 ANKRD37Q7Z713 158 aa16.74■□□□□ 0.27
CLIP2-201ENST00000223398 BCO1Q9HAY6 547 aa16.74■□□□□ 0.27
CLIP2-201ENST00000223398 SLC22A23A1A5C7 686 aa16.74■□□□□ 0.27
CLIP2-201ENST00000223398 ZNF26P17031 533 aaPredicted RBP16.74■□□□□ 0.27
CLIP2-201ENST00000223398 DLX5P56178 289 aa16.74■□□□□ 0.27
CLIP2-201ENST00000223398 SNRPGP62308 76 aaKnown RBP16.74■□□□□ 0.27
CLIP2-201ENST00000223398 PAQR6Q6TCH4 344 aa16.74■□□□□ 0.27
CLIP2-201ENST00000223398 PAQR8Q8TEZ7 354 aa16.74■□□□□ 0.27
CLIP2-201ENST00000223398 TCTEX1D2Q8WW35 142 aa16.74■□□□□ 0.27
CLIP2-201ENST00000223398 TXNIPQ9H3M7 391 aa16.74■□□□□ 0.27
CLIP2-201ENST00000223398 FAM221AA4D161 298 aa16.74■□□□□ 0.27
CLIP2-201ENST00000223398 COL13A1Q5TAT6 717 aaPredicted RBP16.74■□□□□ 0.27
CLIP2-201ENST00000223398 OR4D9Q8NGE8 314 aa16.74■□□□□ 0.27
CLIP2-201ENST00000223398 POC1BQ8TC44 478 aa16.74■□□□□ 0.27
CLIP2-201ENST00000223398 KCTD12Q96CX2 325 aaKnown RBP16.74■□□□□ 0.27
CLIP2-201ENST00000223398 KIRREL1Q96J84 757 aa16.74■□□□□ 0.27
CLIP2-201ENST00000223398 OPALINQ96PE5 141 aa16.74■□□□□ 0.27
CLIP2-201ENST00000223398 ANKUB1A6NFN9 424 aa16.73■□□□□ 0.27
CLIP2-201ENST00000223398 C5orf67F2Z3F1 127 aa16.73■□□□□ 0.27
CLIP2-201ENST00000223398 F8W036 122 aa16.73■□□□□ 0.27
CLIP2-201ENST00000223398 ALDH3B2P48448 385 aa16.73■□□□□ 0.27
CLIP2-201ENST00000223398 BLOC1S1P78537 153 aa16.73■□□□□ 0.27
CLIP2-201ENST00000223398 CST9LP1Q5W188 147 aa16.73■□□□□ 0.27
CLIP2-201ENST00000223398 CPNE4Q96A23 557 aaPredicted RBP16.73■□□□□ 0.27
CLIP2-201ENST00000223398 ZNF419Q96HQ0 510 aaPredicted RBP16.73■□□□□ 0.27
CLIP2-201ENST00000223398 C1orf123Q9NWV4 160 aa16.73■□□□□ 0.27
CLIP2-201ENST00000223398 KCNG2Q9UJ96 466 aa16.73■□□□□ 0.27
CLIP2-201ENST00000223398 CCL4P13236 92 aa16.73■□□□□ 0.27
CLIP2-201ENST00000223398 ZNF718Q3SXZ3 478 aa16.73■□□□□ 0.27
CLIP2-201ENST00000223398 LAIR1Q6GTX8 287 aa16.73■□□□□ 0.27
CLIP2-201ENST00000223398 OR1M1Q8NGA1 313 aa16.73■□□□□ 0.27
CLIP2-201ENST00000223398 H7C1Q1 480 aa16.73■□□□□ 0.27
CLIP2-201ENST00000223398 NRASP01111 189 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms