RNA–Protein interactions for RNA: ENST00000221930.5

TGFB1-201, Transcript of transforming growth factor beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-201ENST00000221930 HOXA6P31267 233 aa13.75□□□□□ -0.21
TGFB1-201ENST00000221930 GALNSP34059 522 aa13.75□□□□□ -0.21
TGFB1-201ENST00000221930 RASGEF1BQ0VAM2 473 aa13.75□□□□□ -0.21
TGFB1-201ENST00000221930 NHLRC3Q5JS37 347 aa13.75□□□□□ -0.21
TGFB1-201ENST00000221930 ASPHD2Q6ICH7 369 aa13.75□□□□□ -0.21
TGFB1-201ENST00000221930 ATRAIDQ6UW56 229 aa13.75□□□□□ -0.21
TGFB1-201ENST00000221930 RHOUQ7L0Q8 258 aa13.75□□□□□ -0.21
TGFB1-201ENST00000221930 TMEM68Q96MH6 324 aa13.75□□□□□ -0.21
TGFB1-201ENST00000221930 CDV3Q9UKY7 258 aaKnown RBP13.75□□□□□ -0.21
TGFB1-201ENST00000221930 B9D1Q9UPM9 204 aa13.75□□□□□ -0.21
TGFB1-201ENST00000221930 H7C417 338 aa13.75□□□□□ -0.21
TGFB1-201ENST00000221930 ACAA1P09110 424 aaPredicted RBP13.75□□□□□ -0.21
TGFB1-201ENST00000221930 INSM1Q01101 510 aaPredicted RBP13.75□□□□□ -0.21
TGFB1-201ENST00000221930 MELKQ14680 651 aa13.75□□□□□ -0.21
TGFB1-201ENST00000221930 EBPQ15125 230 aaKnown RBP13.75□□□□□ -0.21
TGFB1-201ENST00000221930 C2orf68Q2NKX9 166 aa13.75□□□□□ -0.21
TGFB1-201ENST00000221930 C2orf76Q3KRA6 126 aa13.75□□□□□ -0.21
TGFB1-201ENST00000221930 C1orf189Q5VU69 101 aa13.75□□□□□ -0.21
TGFB1-201ENST00000221930 ZNF626Q68DY1 528 aa13.75□□□□□ -0.21
TGFB1-201ENST00000221930 SHISA6Q6ZSJ9 500 aa13.75□□□□□ -0.21
TGFB1-201ENST00000221930 RAB11FIP2Q7L804 512 aa13.75□□□□□ -0.21
TGFB1-201ENST00000221930 TSTD1Q8NFU3 115 aa13.75□□□□□ -0.21
TGFB1-201ENST00000221930 OR5M1Q8NGP8 315 aa13.75□□□□□ -0.21
TGFB1-201ENST00000221930 PTDSS2Q9BVG9 487 aa13.75□□□□□ -0.21
TGFB1-201ENST00000221930 PAPOLGQ9BWT3 736 aaKnown RBP13.75□□□□□ -0.21
TGFB1-201ENST00000221930 GAREM1Q9H706 876 aa13.75□□□□□ -0.21
TGFB1-201ENST00000221930 MRPL22Q9NWU5 206 aaKnown RBP13.75□□□□□ -0.21
TGFB1-201ENST00000221930 MYEF2Q9P2K5 600 aaKnown RBP13.75□□□□□ -0.21
TGFB1-201ENST00000221930 MTFP1Q9UDX5 166 aa13.75□□□□□ -0.21
TGFB1-201ENST00000221930 FBXL3Q9UKT7 428 aa13.75□□□□□ -0.21
TGFB1-201ENST00000221930 TRAV36DV7A0A075B6V5 113 aa13.74□□□□□ -0.21
TGFB1-201ENST00000221930 PRSS37A4D1T9 235 aa13.74□□□□□ -0.21
TGFB1-201ENST00000221930 FITM1A5D6W6 292 aa13.74□□□□□ -0.21
TGFB1-201ENST00000221930 OR6A2O95222 327 aa13.74□□□□□ -0.21
TGFB1-201ENST00000221930 MPZL1O95297 269 aa13.74□□□□□ -0.21
TGFB1-201ENST00000221930 IGHV2-70P01814 119 aa13.74□□□□□ -0.21
TGFB1-201ENST00000221930 NME1P15531 152 aaKnown RBP13.74□□□□□ -0.21
TGFB1-201ENST00000221930 CTLA4P16410 223 aa13.74□□□□□ -0.21
TGFB1-201ENST00000221930 MFGE8Q08431 387 aaPredicted RBP13.74□□□□□ -0.21
TGFB1-201ENST00000221930 PLCXD2Q0VAA5 305 aa13.74□□□□□ -0.21
TGFB1-201ENST00000221930 SQSTM1Q13501 440 aa13.74□□□□□ -0.21
TGFB1-201ENST00000221930 SLC17A1Q14916 467 aa13.74□□□□□ -0.21
TGFB1-201ENST00000221930 OPCMLQ14982 345 aa13.74□□□□□ -0.21
TGFB1-201ENST00000221930 FAM76BQ5HYJ3 339 aa13.74□□□□□ -0.21
TGFB1-201ENST00000221930 HLA-DQA1Q5Y7H0 255 aa13.74□□□□□ -0.21
TGFB1-201ENST00000221930 ANKRD16Q6P6B7 361 aa13.74□□□□□ -0.21
TGFB1-201ENST00000221930 GKN2Q86XP6 184 aa13.74□□□□□ -0.21
TGFB1-201ENST00000221930 EIF4E3Q8N5X7 224 aaKnown RBP13.74□□□□□ -0.21
TGFB1-201ENST00000221930 SFT2D1Q8WV19 159 aa13.74□□□□□ -0.21
TGFB1-201ENST00000221930 SHDQ96IW2 340 aa13.74□□□□□ -0.21
TGFB1-201ENST00000221930 SFXN2Q96NB2 322 aa13.74□□□□□ -0.21
TGFB1-201ENST00000221930 MRTO4Q9UKD2 239 aaKnown RBP13.74□□□□□ -0.21
TGFB1-201ENST00000221930 LILRA5A6NI73 299 aa13.74□□□□□ -0.21
TGFB1-201ENST00000221930 CDC40O60508 579 aaKnown RBP eCLIP13.74□□□□□ -0.21
TGFB1-201ENST00000221930 CPN1P15169 458 aa13.74□□□□□ -0.21
TGFB1-201ENST00000221930 PTAFRP25105 342 aa13.74□□□□□ -0.21
TGFB1-201ENST00000221930 CD27P26842 260 aa13.74□□□□□ -0.21
TGFB1-201ENST00000221930 CD38P28907 300 aa13.74□□□□□ -0.21
TGFB1-201ENST00000221930 ADAM8P78325 824 aa13.74□□□□□ -0.21
TGFB1-201ENST00000221930 C16orf47Q6ZP98 133 aaPredicted RBP13.74□□□□□ -0.21
TGFB1-201ENST00000221930 SPICQ8N5J4 248 aa13.74□□□□□ -0.21
TGFB1-201ENST00000221930 OR51S1Q8NGJ8 323 aa13.74□□□□□ -0.21
TGFB1-201ENST00000221930 FAM3DQ96BQ1 224 aa13.74□□□□□ -0.21
TGFB1-201ENST00000221930 OR8B4Q96RC9 309 aa13.74□□□□□ -0.21
TGFB1-201ENST00000221930 GPN1Q9HCN4 374 aaPredicted RBP13.74□□□□□ -0.21
TGFB1-201ENST00000221930 IGKV3D-11A0A0A0MRZ8 115 aa13.73□□□□□ -0.21
TGFB1-201ENST00000221930 IGHV1OR15-9A0A0B4J2B8 117 aa13.73□□□□□ -0.21
TGFB1-201ENST00000221930 FAM74A7A6NL05 159 aa13.73□□□□□ -0.21
TGFB1-201ENST00000221930 SUSD5O60279 629 aa13.73□□□□□ -0.21
TGFB1-201ENST00000221930 TMEM127O75204 238 aa13.73□□□□□ -0.21
TGFB1-201ENST00000221930 ZNF432O94892 652 aa13.73□□□□□ -0.21
TGFB1-201ENST00000221930 S100A8P05109 93 aa13.73□□□□□ -0.21
TGFB1-201ENST00000221930 GTF2F2P13984 249 aa13.73□□□□□ -0.21
TGFB1-201ENST00000221930 ABCD3P28288 659 aa13.73□□□□□ -0.21
TGFB1-201ENST00000221930 SLC6A8P48029 635 aa13.73□□□□□ -0.21
TGFB1-201ENST00000221930 H2BFSP57053 126 aa13.73□□□□□ -0.21
TGFB1-201ENST00000221930 HFEQ30201 348 aa13.73□□□□□ -0.21
TGFB1-201ENST00000221930 FAM74A3Q4VXF1 159 aa13.73□□□□□ -0.21
TGFB1-201ENST00000221930 NDUFAF7Q7L592 441 aa13.73□□□□□ -0.21
TGFB1-201ENST00000221930 MAMDC2Q7Z304 686 aaPredicted RBP13.73□□□□□ -0.21
TGFB1-201ENST00000221930 CARFQ8N187 725 aa13.73□□□□□ -0.21
TGFB1-201ENST00000221930 BVESQ8NE79 360 aa13.73□□□□□ -0.21
TGFB1-201ENST00000221930 GTF3AQ92664 365 aaKnown RBP13.73□□□□□ -0.21
TGFB1-201ENST00000221930 KIF26BQ2KJY2 2108 aa13.73□□□□□ -0.21
TGFB1-201ENST00000221930 PLSCR5A0PG75 271 aa13.73□□□□□ -0.21
TGFB1-201ENST00000221930 C2orf72A6NCS6 295 aa13.73□□□□□ -0.21
TGFB1-201ENST00000221930 EIF3GO75821 320 aaKnown RBP eCLIP13.73□□□□□ -0.21
TGFB1-201ENST00000221930 CD3DP04234 171 aa13.73□□□□□ -0.21
TGFB1-201ENST00000221930 S100A9P06702 114 aaKnown RBP13.73□□□□□ -0.21
TGFB1-201ENST00000221930 GP1BBP13224 206 aa13.73□□□□□ -0.21
TGFB1-201ENST00000221930 HLA-DOBP13765 273 aa13.73□□□□□ -0.21
TGFB1-201ENST00000221930 MNDAP41218 407 aa13.73□□□□□ -0.21
TGFB1-201ENST00000221930 OR1D5P58170 312 aa13.73□□□□□ -0.21
TGFB1-201ENST00000221930 STARD6P59095 220 aa13.73□□□□□ -0.21
TGFB1-201ENST00000221930 RPL27P61353 136 aaKnown RBP13.73□□□□□ -0.21
TGFB1-201ENST00000221930 ZNF528Q3MIS6 628 aa13.73□□□□□ -0.21
TGFB1-201ENST00000221930 SFRP5Q5T4F7 317 aa13.73□□□□□ -0.21
TGFB1-201ENST00000221930 DNM1P46Q6ZS02 220 aa13.73□□□□□ -0.21
TGFB1-201ENST00000221930 HSD17B13Q7Z5P4 300 aaPredicted RBP13.73□□□□□ -0.21
TGFB1-201ENST00000221930 ZNF679Q8IYX0 411 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms