RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 POU3F2P20265 443 aaPredicted RBP15.46■□□□□ 0.06
VRK1-201ENST00000216639 MMP16P51512 607 aa15.46■□□□□ 0.06
VRK1-201ENST00000216639 PDSS1Q5T2R2 415 aa15.46■□□□□ 0.06
VRK1-201ENST00000216639 BCL2L15Q5TBC7 163 aa15.46■□□□□ 0.06
VRK1-201ENST00000216639 TMEM244Q5VVB8 128 aa15.46■□□□□ 0.06
VRK1-201ENST00000216639 WDR87Q6ZQQ6 2873 aa15.46■□□□□ 0.06
VRK1-201ENST00000216639 WDFY4Q6ZS81 3184 aa15.46■□□□□ 0.06
VRK1-201ENST00000216639 LRRTM1Q86UE6 522 aa15.46■□□□□ 0.06
VRK1-201ENST00000216639 OR2M7Q8NG81 312 aa15.46■□□□□ 0.06
VRK1-201ENST00000216639 OR51A4Q8NGJ6 313 aa15.46■□□□□ 0.06
VRK1-201ENST00000216639 LGALS14Q8TCE9 139 aa15.46■□□□□ 0.06
VRK1-201ENST00000216639 TMEM54Q969K7 222 aa15.46■□□□□ 0.06
VRK1-201ENST00000216639 OR2M2Q96R28 347 aa15.46■□□□□ 0.06
VRK1-201ENST00000216639 UCN2Q96RP3 112 aa15.46■□□□□ 0.06
VRK1-201ENST00000216639 GFI1Q99684 422 aa15.46■□□□□ 0.06
VRK1-201ENST00000216639 WACQ9BTA9 647 aa15.46■□□□□ 0.06
VRK1-201ENST00000216639 NIPAL2Q9H841 368 aa15.46■□□□□ 0.06
VRK1-201ENST00000216639 GDF2Q9UK05 429 aaPredicted RBP15.46■□□□□ 0.06
VRK1-201ENST00000216639 FBXL3Q9UKT7 428 aa15.46■□□□□ 0.06
VRK1-201ENST00000216639 HHLA2Q9UM44 414 aa15.46■□□□□ 0.06
VRK1-201ENST00000216639 SLC43A1O75387 559 aa15.45■□□□□ 0.06
VRK1-201ENST00000216639 UBL3O95164 117 aa15.45■□□□□ 0.06
VRK1-201ENST00000216639 SLC34A2O95436 690 aa15.45■□□□□ 0.06
VRK1-201ENST00000216639 MAS1P04201 325 aa15.45■□□□□ 0.06
VRK1-201ENST00000216639 ACHEP22303 614 aa15.45■□□□□ 0.06
VRK1-201ENST00000216639 EIF1AXP47813 144 aaKnown RBP15.45■□□□□ 0.06
VRK1-201ENST00000216639 FOXO1Q12778 655 aa15.45■□□□□ 0.06
VRK1-201ENST00000216639 CADM3Q8N126 398 aa15.45■□□□□ 0.06
VRK1-201ENST00000216639 OR2V1Q8NHB1 315 aa15.45■□□□□ 0.06
VRK1-201ENST00000216639 SIGLEC12Q96PQ1 595 aa15.45■□□□□ 0.06
VRK1-201ENST00000216639 SRXN1Q9BYN0 137 aa15.45■□□□□ 0.06
VRK1-201ENST00000216639 HDHD2Q9H0R4 259 aa15.45■□□□□ 0.06
VRK1-201ENST00000216639 LIN7BQ9HAP6 207 aa15.45■□□□□ 0.06
VRK1-201ENST00000216639 EMC7Q9NPA0 242 aa15.45■□□□□ 0.06
VRK1-201ENST00000216639 FREM3P0C091 2139 aa15.44■□□□□ 0.06
VRK1-201ENST00000216639 A0A0B4J203 849 aa15.44■□□□□ 0.06
VRK1-201ENST00000216639 PINLYPA6NC86 204 aa15.44■□□□□ 0.06
VRK1-201ENST00000216639 ZNF878C9JN71 531 aa15.44■□□□□ 0.06
VRK1-201ENST00000216639 WDPCPO95876 746 aa15.44■□□□□ 0.06
VRK1-201ENST00000216639 HSD11B1P28845 292 aa15.44■□□□□ 0.06
VRK1-201ENST00000216639 RFX2P48378 723 aa15.44■□□□□ 0.06
VRK1-201ENST00000216639 CLDN20P56880 219 aa15.44■□□□□ 0.06
VRK1-201ENST00000216639 SCAND1P57086 179 aa15.44■□□□□ 0.06
VRK1-201ENST00000216639 TCF15Q12870 199 aa15.44■□□□□ 0.06
VRK1-201ENST00000216639 MFAP5Q13361 173 aa15.44■□□□□ 0.06
VRK1-201ENST00000216639 TAF13Q15543 124 aa15.44■□□□□ 0.06
VRK1-201ENST00000216639 C10orf128Q5T292 105 aa15.44■□□□□ 0.06
VRK1-201ENST00000216639 HACD4Q5VWC8 232 aa15.44■□□□□ 0.06
VRK1-201ENST00000216639 LINC00696Q6ZRV3 163 aa15.44■□□□□ 0.06
VRK1-201ENST00000216639 GGNQ86UU5 652 aa15.44■□□□□ 0.06
VRK1-201ENST00000216639 DTX1Q86Y01 620 aa15.44■□□□□ 0.06
VRK1-201ENST00000216639 UBQLNLQ8IYU4 475 aa15.44■□□□□ 0.06
VRK1-201ENST00000216639 RFT1Q96AA3 541 aa15.44■□□□□ 0.06
VRK1-201ENST00000216639 ZNF385AQ96PM9 386 aaKnown RBP15.44■□□□□ 0.06
VRK1-201ENST00000216639 C11orf54Q9H0W9 315 aaPredicted RBP15.44■□□□□ 0.06
VRK1-201ENST00000216639 G6PC2Q9NQR9 355 aa15.44■□□□□ 0.06
VRK1-201ENST00000216639 CLEC4AQ9UMR7 237 aa15.44■□□□□ 0.06
VRK1-201ENST00000216639 FOXJ3Q9UPW0 622 aa15.44■□□□□ 0.06
VRK1-201ENST00000216639 ETV7Q9Y603 341 aa15.44■□□□□ 0.06
VRK1-201ENST00000216639 LHFPL6Q9Y693 200 aa15.44■□□□□ 0.06
VRK1-201ENST00000216639 ALPK2Q86TB3 2170 aa15.44■□□□□ 0.06
VRK1-201ENST00000216639 TRAV8-7A0A075B6U6 113 aa15.43■□□□□ 0.06
VRK1-201ENST00000216639 CDRT15L2A8MXV6 281 aa15.43■□□□□ 0.06
VRK1-201ENST00000216639 H3BSH0 61 aa15.43■□□□□ 0.06
VRK1-201ENST00000216639 SMAD9O15198 467 aaKnown RBP15.43■□□□□ 0.06
VRK1-201ENST00000216639 CDAP32320 146 aa15.43■□□□□ 0.06
VRK1-201ENST00000216639 ZNF133P52736 654 aaPredicted RBP15.43■□□□□ 0.06
VRK1-201ENST00000216639 RRADP55042 308 aa15.43■□□□□ 0.06
VRK1-201ENST00000216639 LSM6P62312 80 aaKnown RBP15.43■□□□□ 0.06
VRK1-201ENST00000216639 ENKURQ8TC29 256 aa15.43■□□□□ 0.06
VRK1-201ENST00000216639 ASB5Q8WWX0 329 aa15.43■□□□□ 0.06
VRK1-201ENST00000216639 NEURL2Q9BR09 285 aa15.43■□□□□ 0.06
VRK1-201ENST00000216639 THAP7Q9BT49 309 aaPredicted RBP15.43■□□□□ 0.06
VRK1-201ENST00000216639 MOB1AQ9H8S9 216 aa15.43■□□□□ 0.06
VRK1-201ENST00000216639 CAMK2AQ9UQM7 478 aa15.43■□□□□ 0.06
VRK1-201ENST00000216639 PCDHGA9Q9Y5G4 932 aaKnown RBP15.43■□□□□ 0.06
VRK1-201ENST00000216639 TTLL8A6PVC2 850 aa15.43■□□□□ 0.06
VRK1-201ENST00000216639 TNFRSF10AO00220 468 aa15.43■□□□□ 0.06
VRK1-201ENST00000216639 SSX4O60224 188 aa15.43■□□□□ 0.06
VRK1-201ENST00000216639 ADRA2CP18825 462 aa15.43■□□□□ 0.06
VRK1-201ENST00000216639 MSR1P21757 451 aa15.43■□□□□ 0.06
VRK1-201ENST00000216639 MAP2K3P46734 347 aa15.43■□□□□ 0.06
VRK1-201ENST00000216639 ZNF84P51523 738 aa15.43■□□□□ 0.06
VRK1-201ENST00000216639 SUCLG1P53597 346 aaKnown RBP15.43■□□□□ 0.06
VRK1-201ENST00000216639 GFRA1P56159 465 aa15.43■□□□□ 0.06
VRK1-201ENST00000216639 ZNF57Q68EA5 555 aaPredicted RBP15.43■□□□□ 0.06
VRK1-201ENST00000216639 SULF2Q8IWU5 870 aa15.43■□□□□ 0.06
VRK1-201ENST00000216639 TMEM123Q8N131 208 aa15.43■□□□□ 0.06
VRK1-201ENST00000216639 GALNT16Q8N428 558 aa15.43■□□□□ 0.06
VRK1-201ENST00000216639 OR13C3Q8NGS6 347 aa15.43■□□□□ 0.06
VRK1-201ENST00000216639 OR10D3Q8NH80 312 aa15.43■□□□□ 0.06
VRK1-201ENST00000216639 PPP1R14AQ96A00 147 aa15.43■□□□□ 0.06
VRK1-201ENST00000216639 CPNE4Q96A23 557 aaPredicted RBP15.43■□□□□ 0.06
VRK1-201ENST00000216639 NELFAQ9H3P2 528 aa15.43■□□□□ 0.06
VRK1-201ENST00000216639 ZNF703Q9H7S9 590 aaPredicted RBP15.43■□□□□ 0.06
VRK1-201ENST00000216639 FAM206AQ9NX38 181 aa15.43■□□□□ 0.06
VRK1-201ENST00000216639 ASH2LQ9UBL3 628 aa15.43■□□□□ 0.06
VRK1-201ENST00000216639 RCE1Q9Y256 329 aa15.43■□□□□ 0.06
VRK1-201ENST00000216639 LOC107986453A0A1B0GWG9 222 aa15.42■□□□□ 0.06
VRK1-201ENST00000216639 H0YC42 278 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms