RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 NUDT8Q8WV74 236 aa12.38□□□□□ -0.43
SF3A1-201ENST00000215793 ZNF75AQ96N20 296 aa12.38□□□□□ -0.43
SF3A1-201ENST00000215793 C12orf49Q9H741 205 aa12.38□□□□□ -0.43
SF3A1-201ENST00000215793 ERVMER34-1Q9H9K5 563 aa12.38□□□□□ -0.43
SF3A1-201ENST00000215793 FBXO8Q9NRD0 319 aa12.38□□□□□ -0.43
SF3A1-201ENST00000215793 PURGQ9UJV8 347 aaKnown RBP12.38□□□□□ -0.43
SF3A1-201ENST00000215793 ZNF346Q9UL40 294 aaKnown RBP12.38□□□□□ -0.43
SF3A1-201ENST00000215793 AIPO00170 330 aa12.38□□□□□ -0.43
SF3A1-201ENST00000215793 FABP1P07148 127 aa12.38□□□□□ -0.43
SF3A1-201ENST00000215793 TBXA2RP21731 343 aa12.38□□□□□ -0.43
SF3A1-201ENST00000215793 TESK1Q15569 626 aa12.38□□□□□ -0.43
SF3A1-201ENST00000215793 CTU2Q2VPK5 515 aaKnown RBP12.38□□□□□ -0.43
SF3A1-201ENST00000215793 AVPI1Q5T686 147 aa12.38□□□□□ -0.43
SF3A1-201ENST00000215793 PLXDC2Q6UX71 529 aa12.38□□□□□ -0.43
SF3A1-201ENST00000215793 ZNF687Q8N1G0 1237 aa12.38□□□□□ -0.43
SF3A1-201ENST00000215793 BHLHE23Q8NDY6 225 aa12.38□□□□□ -0.43
SF3A1-201ENST00000215793 MITD1Q8WV92 249 aa12.38□□□□□ -0.43
SF3A1-201ENST00000215793 GPX5O75715 221 aa12.37□□□□□ -0.43
SF3A1-201ENST00000215793 SIX6O95475 246 aa12.37□□□□□ -0.43
SF3A1-201ENST00000215793 APOA2P02652 100 aa12.37□□□□□ -0.43
SF3A1-201ENST00000215793 PRPH2P23942 346 aa12.37□□□□□ -0.43
SF3A1-201ENST00000215793 BSGP35613 385 aa12.37□□□□□ -0.43
SF3A1-201ENST00000215793 FJX1Q86VR8 437 aa12.37□□□□□ -0.43
SF3A1-201ENST00000215793 TAAR5O14804 337 aa12.37□□□□□ -0.43
SF3A1-201ENST00000215793 OR8U8P0C7N1 319 aa12.37□□□□□ -0.43
SF3A1-201ENST00000215793 DUSP1P28562 367 aa12.37□□□□□ -0.43
SF3A1-201ENST00000215793 CAPZBP47756 277 aa12.37□□□□□ -0.43
SF3A1-201ENST00000215793 DMWDQ09019 674 aa12.37□□□□□ -0.43
SF3A1-201ENST00000215793 FAM53BQ14153 422 aa12.37□□□□□ -0.43
SF3A1-201ENST00000215793 TMUB2Q71RG4 321 aa12.37□□□□□ -0.43
SF3A1-201ENST00000215793 TEX19Q8NA77 164 aa12.37□□□□□ -0.43
SF3A1-201ENST00000215793 OR52H1Q8NGJ2 320 aa12.37□□□□□ -0.43
SF3A1-201ENST00000215793 OR51E1Q8TCB6 317 aa12.37□□□□□ -0.43
SF3A1-201ENST00000215793 LINC00615Q96LM1 132 aaPredicted RBP12.37□□□□□ -0.43
SF3A1-201ENST00000215793 TMEM43Q9BTV4 400 aa12.37□□□□□ -0.43
SF3A1-201ENST00000215793 KLF13Q9Y2Y9 288 aaPredicted RBP12.37□□□□□ -0.43
SF3A1-201ENST00000215793 ASB1Q9Y576 335 aa12.37□□□□□ -0.43
SF3A1-201ENST00000215793 K7EQM0 130 aa12.37□□□□□ -0.43
SF3A1-201ENST00000215793 NRG2O14511 850 aaPredicted RBP12.37□□□□□ -0.43
SF3A1-201ENST00000215793 OR2F2O95006 317 aa12.37□□□□□ -0.43
SF3A1-201ENST00000215793 FUCA1P04066 466 aa12.37□□□□□ -0.43
SF3A1-201ENST00000215793 GUSBP08236 651 aa12.37□□□□□ -0.43
SF3A1-201ENST00000215793 MYOGP15173 224 aa12.37□□□□□ -0.43
SF3A1-201ENST00000215793 SRP9P49458 86 aaKnown RBP12.37□□□□□ -0.43
SF3A1-201ENST00000215793 OR2F1Q13607 317 aa12.37□□□□□ -0.43
SF3A1-201ENST00000215793 H2BFWTQ7Z2G1 175 aa12.37□□□□□ -0.43
SF3A1-201ENST00000215793 CISD2Q8N5K1 135 aaKnown RBP12.37□□□□□ -0.43
SF3A1-201ENST00000215793 CPEB3Q8NE35 698 aaKnown RBP12.37□□□□□ -0.43
SF3A1-201ENST00000215793 OR2AE1Q8NHA4 323 aa12.37□□□□□ -0.43
SF3A1-201ENST00000215793 PCNPQ8WW12 178 aaKnown RBP12.37□□□□□ -0.43
SF3A1-201ENST00000215793 SLC22A11Q9NSA0 550 aa12.37□□□□□ -0.43
SF3A1-201ENST00000215793 BOLA1Q9Y3E2 137 aa12.37□□□□□ -0.43
SF3A1-201ENST00000215793 CHST2Q9Y4C5 530 aa12.37□□□□□ -0.43
SF3A1-201ENST00000215793 FAM166BA8MTA8 275 aa12.37□□□□□ -0.43
SF3A1-201ENST00000215793 M0R135 149 aa12.37□□□□□ -0.43
SF3A1-201ENST00000215793 ZNF195O14628 629 aa12.37□□□□□ -0.43
SF3A1-201ENST00000215793 SCGB1D1O95968 90 aa12.37□□□□□ -0.43
SF3A1-201ENST00000215793 APEHP13798 732 aaKnown RBP12.37□□□□□ -0.43
SF3A1-201ENST00000215793 ADRA2CP18825 462 aa12.37□□□□□ -0.43
SF3A1-201ENST00000215793 ACKR3P25106 362 aa12.37□□□□□ -0.43
SF3A1-201ENST00000215793 SUB1P53999 127 aaKnown RBP eCLIP12.37□□□□□ -0.432e-7■■■□□ 19
SF3A1-201ENST00000215793 RPL18Q07020 188 aaKnown RBP12.37□□□□□ -0.43
SF3A1-201ENST00000215793 CA13Q8N1Q1 262 aa12.37□□□□□ -0.43
SF3A1-201ENST00000215793 C16orf52Q8NHV5 167 aa12.37□□□□□ -0.43
SF3A1-201ENST00000215793 ZNF799Q96GE5 643 aa12.37□□□□□ -0.43
SF3A1-201ENST00000215793 OR2A14Q96R47 310 aa12.37□□□□□ -0.43
SF3A1-201ENST00000215793 DDOQ99489 341 aa12.37□□□□□ -0.43
SF3A1-201ENST00000215793 PLK3Q9H4B4 646 aa12.37□□□□□ -0.43
SF3A1-201ENST00000215793 TAF9BQ9HBM6 251 aa12.37□□□□□ -0.43
SF3A1-201ENST00000215793 OR51B4Q9Y5P0 310 aa12.37□□□□□ -0.43
SF3A1-201ENST00000215793 DSCR3O14972 297 aa12.36□□□□□ -0.43
SF3A1-201ENST00000215793 ALOX5APP20292 161 aa12.36□□□□□ -0.43
SF3A1-201ENST00000215793 PNLIPRP2P54317 469 aa12.36□□□□□ -0.43
SF3A1-201ENST00000215793 RUNX2Q13950 521 aa12.36□□□□□ -0.43
SF3A1-201ENST00000215793 OXA1LQ15070 435 aa12.36□□□□□ -0.43
SF3A1-201ENST00000215793 KMT5CQ86Y97 462 aa12.36□□□□□ -0.43
SF3A1-201ENST00000215793 SKA3Q8IX90 412 aa12.36□□□□□ -0.43
SF3A1-201ENST00000215793 OR51F2Q8NH61 342 aa12.36□□□□□ -0.43
SF3A1-201ENST00000215793 SMIM19Q96E16 107 aa12.36□□□□□ -0.43
SF3A1-201ENST00000215793 MENTQ9BUN1 341 aa12.36□□□□□ -0.43
SF3A1-201ENST00000215793 GPR173Q9NS66 373 aa12.36□□□□□ -0.43
SF3A1-201ENST00000215793 KCNG2Q9UJ96 466 aa12.36□□□□□ -0.43
SF3A1-201ENST00000215793 RGPD2P0DJD1 1756 aa12.36□□□□□ -0.43
SF3A1-201ENST00000215793 F5P12259 2224 aa12.36□□□□□ -0.43
SF3A1-201ENST00000215793 RGPD1P0DJD0 1748 aa12.36□□□□□ -0.43
SF3A1-201ENST00000215793 PMS2P1A4D2B8 440 aa12.36□□□□□ -0.43
SF3A1-201ENST00000215793 NUDT19A8MXV4 375 aa12.36□□□□□ -0.43
SF3A1-201ENST00000215793 PGFP49763 221 aa12.36□□□□□ -0.43
SF3A1-201ENST00000215793 CLN3Q13286 438 aa12.36□□□□□ -0.43
SF3A1-201ENST00000215793 VWA2Q5GFL6 755 aa12.36□□□□□ -0.43
SF3A1-201ENST00000215793 YRDCQ86U90 279 aaKnown RBP12.36□□□□□ -0.43
SF3A1-201ENST00000215793 SLC38A9Q8NBW4 561 aa12.36□□□□□ -0.43
SF3A1-201ENST00000215793 OR2G3Q8NGZ4 309 aa12.36□□□□□ -0.43
SF3A1-201ENST00000215793 PATE1Q8WXA2 126 aa12.36□□□□□ -0.43
SF3A1-201ENST00000215793 ADAM19Q9H013 955 aa12.36□□□□□ -0.43
SF3A1-201ENST00000215793 TMEM30AQ9NV96 361 aa12.36□□□□□ -0.43
SF3A1-201ENST00000215793 KPTNQ9Y664 436 aa12.36□□□□□ -0.43
SF3A1-201ENST00000215793 AHDC1Q5TGY3 1603 aaPredicted RBP12.36□□□□□ -0.43
SF3A1-201ENST00000215793 TMEM127O75204 238 aa12.36□□□□□ -0.43
SF3A1-201ENST00000215793 JTBO76095 146 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 184 ms