RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 IGFN1Q86VF2 1251 aa13.43□□□□□ -0.26
ERCC1-201ENST00000013807 NPEPL1Q8NDH3 523 aa13.43□□□□□ -0.26
ERCC1-201ENST00000013807 NANPQ8TBE9 248 aa13.43□□□□□ -0.26
ERCC1-201ENST00000013807 RCN3Q96D15 328 aa13.43□□□□□ -0.26
ERCC1-201ENST00000013807 SAMD8Q96LT4 415 aa13.43□□□□□ -0.26
ERCC1-201ENST00000013807 JMJD8Q96S16 334 aa13.43□□□□□ -0.26
ERCC1-201ENST00000013807 GPX7Q96SL4 187 aaPredicted RBP13.43□□□□□ -0.26
ERCC1-201ENST00000013807 RHCGQ9UBD6 479 aa13.43□□□□□ -0.26
ERCC1-201ENST00000013807 PRSS37A4D1T9 235 aa13.42□□□□□ -0.26
ERCC1-201ENST00000013807 J3QW42 95 aa13.42□□□□□ -0.26
ERCC1-201ENST00000013807 CXCR6O00574 342 aa13.42□□□□□ -0.26
ERCC1-201ENST00000013807 PTP4A3O75365 173 aa13.42□□□□□ -0.26
ERCC1-201ENST00000013807 IGHV2-70P01814 119 aa13.42□□□□□ -0.26
ERCC1-201ENST00000013807 YAP1P46937 504 aaKnown RBP13.42□□□□□ -0.26
ERCC1-201ENST00000013807 LIMS1P48059 325 aa13.42□□□□□ -0.26
ERCC1-201ENST00000013807 LSM6P62312 80 aaKnown RBP13.42□□□□□ -0.26
ERCC1-201ENST00000013807 LIPEQ05469 1076 aa13.42□□□□□ -0.26
ERCC1-201ENST00000013807 SCRN3Q0VDG4 424 aa13.42□□□□□ -0.26
ERCC1-201ENST00000013807 IFI44LQ53G44 452 aa13.42□□□□□ -0.26
ERCC1-201ENST00000013807 DCAF12L2Q5VW00 463 aa13.42□□□□□ -0.26
ERCC1-201ENST00000013807 C12orf54Q6X4T0 127 aa13.42□□□□□ -0.26
ERCC1-201ENST00000013807 ZNF730Q6ZMV8 503 aa13.42□□□□□ -0.26
ERCC1-201ENST00000013807 PEG10Q86TG7 708 aaKnown RBP13.42□□□□□ -0.26
ERCC1-201ENST00000013807 ZNF283Q8N7M2 679 aa13.42□□□□□ -0.26
ERCC1-201ENST00000013807 OR13C2Q8NGS9 318 aa13.42□□□□□ -0.26
ERCC1-201ENST00000013807 SLC7A13Q8TCU3 470 aa13.42□□□□□ -0.26
ERCC1-201ENST00000013807 COG8Q96MW5 612 aa13.42□□□□□ -0.26
ERCC1-201ENST00000013807 NMNAT1Q9HAN9 279 aaPredicted RBP13.42□□□□□ -0.26
ERCC1-201ENST00000013807 NRIP3Q9NQ35 241 aa13.42□□□□□ -0.26
ERCC1-201ENST00000013807 GRHPRQ9UBQ7 328 aa13.42□□□□□ -0.26
ERCC1-201ENST00000013807 OPN4Q9UHM6 478 aa13.42□□□□□ -0.26
ERCC1-201ENST00000013807 ATPIF1Q9UII2 106 aa13.42□□□□□ -0.26
ERCC1-201ENST00000013807 TMEM5Q9Y2B1 443 aa13.42□□□□□ -0.26
ERCC1-201ENST00000013807 NPTNQ9Y639 398 aa13.42□□□□□ -0.26
ERCC1-201ENST00000013807 TEX13CA0A0J9YWL9 993 aa13.41□□□□□ -0.26
ERCC1-201ENST00000013807 A0A1W2PPL8 197 aa13.41□□□□□ -0.26
ERCC1-201ENST00000013807 A0A1W2PRQ8 180 aa13.41□□□□□ -0.26
ERCC1-201ENST00000013807 TRIM77I1YAP6 450 aa13.41□□□□□ -0.26
ERCC1-201ENST00000013807 NME4O00746 187 aa13.41□□□□□ -0.26
ERCC1-201ENST00000013807 NDUFAB1O14561 156 aa13.41□□□□□ -0.26
ERCC1-201ENST00000013807 ABHD16AO95870 558 aa13.41□□□□□ -0.26
ERCC1-201ENST00000013807 ADRA2CP18825 462 aa13.41□□□□□ -0.26
ERCC1-201ENST00000013807 GSTM3P21266 225 aa13.41□□□□□ -0.26
ERCC1-201ENST00000013807 AQP6Q13520 282 aa13.41□□□□□ -0.26
ERCC1-201ENST00000013807 DGCR6Q14129 220 aa13.41□□□□□ -0.26
ERCC1-201ENST00000013807 TMEM155Q4W5P6 130 aa13.41□□□□□ -0.26
ERCC1-201ENST00000013807 SPRNQ5BIV9 151 aa13.41□□□□□ -0.26
ERCC1-201ENST00000013807 MESTQ5EB52 335 aa13.41□□□□□ -0.26
ERCC1-201ENST00000013807 TBPL2Q6SJ96 375 aa13.41□□□□□ -0.26
ERCC1-201ENST00000013807 HACD2Q6Y1H2 254 aa13.41□□□□□ -0.26
ERCC1-201ENST00000013807 VASH1Q7L8A9 365 aaPredicted RBP13.41□□□□□ -0.26
ERCC1-201ENST00000013807 HAVCR1Q96D42 359 aa13.41□□□□□ -0.26
ERCC1-201ENST00000013807 Q96M85 177 aa13.41□□□□□ -0.26
ERCC1-201ENST00000013807 GAL3ST1Q99999 423 aa13.41□□□□□ -0.26
ERCC1-201ENST00000013807 RBM4Q9BWF3 364 aaKnown RBP13.41□□□□□ -0.26
ERCC1-201ENST00000013807 SUCNR1Q9BXA5 334 aa13.41□□□□□ -0.26
ERCC1-201ENST00000013807 EFCAB1Q9HAE3 211 aa13.41□□□□□ -0.26
ERCC1-201ENST00000013807 MSL2Q9HCI7 577 aa13.41□□□□□ -0.26
ERCC1-201ENST00000013807 ARMCX1Q9P291 453 aa13.41□□□□□ -0.26
ERCC1-201ENST00000013807 GMPR2Q9P2T1 348 aaKnown RBP13.41□□□□□ -0.26
ERCC1-201ENST00000013807 IL19Q9UHD0 177 aa13.41□□□□□ -0.26
ERCC1-201ENST00000013807 SIGLEC7Q9Y286 467 aa13.41□□□□□ -0.26
ERCC1-201ENST00000013807 ADAM18Q9Y3Q7 739 aa13.41□□□□□ -0.26
ERCC1-201ENST00000013807 ENPP4Q9Y6X5 453 aa13.41□□□□□ -0.26
ERCC1-201ENST00000013807 OR6C6A6NF89 314 aa13.4□□□□□ -0.26
ERCC1-201ENST00000013807 SGCEO43556 437 aa13.4□□□□□ -0.26
ERCC1-201ENST00000013807 FOXH1O75593 365 aa13.4□□□□□ -0.26
ERCC1-201ENST00000013807 COX4I1P13073 169 aa13.4□□□□□ -0.26
ERCC1-201ENST00000013807 CTLA4P16410 223 aa13.4□□□□□ -0.26
ERCC1-201ENST00000013807 TNFRSF1AP19438 455 aa13.4□□□□□ -0.26
ERCC1-201ENST00000013807 CPT2P23786 658 aa13.4□□□□□ -0.26
ERCC1-201ENST00000013807 SDHAP31040 664 aa13.4□□□□□ -0.26
ERCC1-201ENST00000013807 TNFAIP6P98066 277 aaPredicted RBP13.4□□□□□ -0.26
ERCC1-201ENST00000013807 KCNMB1Q16558 191 aa13.4□□□□□ -0.26
ERCC1-201ENST00000013807 GPR139Q6DWJ6 353 aa13.4□□□□□ -0.26
ERCC1-201ENST00000013807 Q6ZR03 302 aa13.4□□□□□ -0.26
ERCC1-201ENST00000013807 LRRC28Q86X40 367 aaPredicted RBP13.4□□□□□ -0.26
ERCC1-201ENST00000013807 POU5F2Q8N7G0 328 aa13.4□□□□□ -0.26
ERCC1-201ENST00000013807 DVL3Q92997 716 aaPredicted RBP13.4□□□□□ -0.26
ERCC1-201ENST00000013807 PTP4A1Q93096 173 aa13.4□□□□□ -0.26
ERCC1-201ENST00000013807 DCLRE1CQ96SD1 692 aaKnown RBP13.4□□□□□ -0.26
ERCC1-201ENST00000013807 C7orf69Q9H7B7 122 aa13.4□□□□□ -0.26
ERCC1-201ENST00000013807 TMEM106BQ9NUM4 274 aa13.4□□□□□ -0.26
ERCC1-201ENST00000013807 VSX1Q9NZR4 365 aaPredicted RBP13.4□□□□□ -0.26
ERCC1-201ENST00000013807 ABCD2Q9UBJ2 740 aa13.4□□□□□ -0.26
ERCC1-201ENST00000013807 PURGQ9UJV8 347 aaKnown RBP13.4□□□□□ -0.26
ERCC1-201ENST00000013807 STARD10Q9Y365 291 aa13.4□□□□□ -0.26
ERCC1-201ENST00000013807 XKRYO14609 159 aa13.39□□□□□ -0.27
ERCC1-201ENST00000013807 TIMM8AO60220 97 aaPredicted RBP13.39□□□□□ -0.27
ERCC1-201ENST00000013807 DOK2O60496 412 aa13.39□□□□□ -0.27
ERCC1-201ENST00000013807 NDUFB2O95178 105 aa13.39□□□□□ -0.27
ERCC1-201ENST00000013807 ZNF682O95780 498 aa13.39□□□□□ -0.27
ERCC1-201ENST00000013807 TXNDC12O95881 172 aa13.39□□□□□ -0.27
ERCC1-201ENST00000013807 RAC2P15153 192 aa13.39□□□□□ -0.27
ERCC1-201ENST00000013807 ZFP36P26651 326 aaKnown RBP13.39□□□□□ -0.27
ERCC1-201ENST00000013807 RPL4P36578 427 aaKnown RBP13.39□□□□□ -0.27
ERCC1-201ENST00000013807 GPR4P46093 362 aa13.39□□□□□ -0.27
ERCC1-201ENST00000013807 SLC6A9P48067 706 aa13.39□□□□□ -0.27
ERCC1-201ENST00000013807 GSK3BP49841 420 aa13.39□□□□□ -0.27
ERCC1-201ENST00000013807 SLC7A2P52569 658 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms