RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 ZNF556Q9HAH1 456 aa6.42□□□□□ -1.38
PHGDH-225ENST00000641720 BARX1Q9HBU1 254 aaPredicted RBP6.42□□□□□ -1.38
PHGDH-225ENST00000641720 NOX3Q9HBY0 568 aa6.42□□□□□ -1.38
PHGDH-225ENST00000641720 KRT84Q9NSB2 600 aa6.42□□□□□ -1.38
PHGDH-225ENST00000641720 TAS2R16Q9NYV7 291 aa6.42□□□□□ -1.38
PHGDH-225ENST00000641720 GLTPQ9NZD2 209 aa6.42□□□□□ -1.38
PHGDH-225ENST00000641720 POFUT2Q9Y2G5 429 aa6.42□□□□□ -1.38
PHGDH-225ENST00000641720 A0A096LPE4 126 aa6.41□□□□□ -1.38
PHGDH-225ENST00000641720 A0A1W2PPZ6 126 aa6.41□□□□□ -1.38
PHGDH-225ENST00000641720 OR6C68A6NDL8 312 aa6.41□□□□□ -1.38
PHGDH-225ENST00000641720 OR6C65A6NJZ3 312 aa6.41□□□□□ -1.38
PHGDH-225ENST00000641720 CENPBD1B2RD01 187 aa6.41□□□□□ -1.38
PHGDH-225ENST00000641720 H7C417 338 aa6.41□□□□□ -1.38
PHGDH-225ENST00000641720 DCTN6O00399 190 aa6.41□□□□□ -1.38
PHGDH-225ENST00000641720 XKRYO14609 159 aa6.41□□□□□ -1.38
PHGDH-225ENST00000641720 LY6HO94772 140 aa6.41□□□□□ -1.38
PHGDH-225ENST00000641720 VENTXO95231 258 aa6.41□□□□□ -1.38
PHGDH-225ENST00000641720 CD3EP07766 207 aa6.41□□□□□ -1.38
PHGDH-225ENST00000641720 QDPRP09417 244 aa6.41□□□□□ -1.38
PHGDH-225ENST00000641720 B4GALT1P15291 398 aa6.41□□□□□ -1.38
PHGDH-225ENST00000641720 NOS3P29474 1203 aa6.41□□□□□ -1.38
PHGDH-225ENST00000641720 GRK5P34947 590 aa6.41□□□□□ -1.38
PHGDH-225ENST00000641720 POLR2IP36954 125 aaKnown RBP6.41□□□□□ -1.38
PHGDH-225ENST00000641720 RPS6KA3P51812 740 aa6.41□□□□□ -1.38
PHGDH-225ENST00000641720 ARHGDIAP52565 204 aa6.41□□□□□ -1.38
PHGDH-225ENST00000641720 ZNF133P52736 654 aaPredicted RBP6.41□□□□□ -1.38
PHGDH-225ENST00000641720 SH3BGRP55822 239 aaPredicted RBP6.41□□□□□ -1.38
PHGDH-225ENST00000641720 TUBA1BP68363 451 aa6.41□□□□□ -1.38
PHGDH-225ENST00000641720 TUBA4AP68366 448 aa6.41□□□□□ -1.38
PHGDH-225ENST00000641720 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.41□□□□□ -1.38
PHGDH-225ENST00000641720 SPOCK1Q08629 439 aa6.41□□□□□ -1.38
PHGDH-225ENST00000641720 COX10Q12887 443 aa6.41□□□□□ -1.38
PHGDH-225ENST00000641720 CRMP1Q14194 572 aa6.41□□□□□ -1.38
PHGDH-225ENST00000641720 STK11Q15831 433 aa6.41□□□□□ -1.38
PHGDH-225ENST00000641720 TBRG1Q3YBR2 411 aa6.41□□□□□ -1.38
PHGDH-225ENST00000641720 PDLIM3Q53GG5 364 aaPredicted RBP6.41□□□□□ -1.38
PHGDH-225ENST00000641720 ZNF362Q5T0B9 420 aaPredicted RBP6.41□□□□□ -1.38
PHGDH-225ENST00000641720 C10orf128Q5T292 105 aa6.41□□□□□ -1.38
PHGDH-225ENST00000641720 OTPQ5XKR4 325 aa6.41□□□□□ -1.38
PHGDH-225ENST00000641720 LPCAT4Q643R3 524 aa6.41□□□□□ -1.38
PHGDH-225ENST00000641720 CYB5R2Q6BCY4 276 aa6.41□□□□□ -1.38
PHGDH-225ENST00000641720 ACSM5Q6NUN0 579 aa6.41□□□□□ -1.38
PHGDH-225ENST00000641720 LEG1Q6P5S2 330 aa6.41□□□□□ -1.38
PHGDH-225ENST00000641720 SLC25A47Q6Q0C1 308 aa6.41□□□□□ -1.38
PHGDH-225ENST00000641720 TUBA1AQ71U36 451 aa6.41□□□□□ -1.38
PHGDH-225ENST00000641720 WDR31Q8NA23 367 aa6.41□□□□□ -1.38
PHGDH-225ENST00000641720 CYB561A3Q8NBI2 242 aa6.41□□□□□ -1.38
PHGDH-225ENST00000641720 NPEPL1Q8NDH3 523 aa6.41□□□□□ -1.38
PHGDH-225ENST00000641720 C1orf162Q8NEQ5 155 aaPredicted RBP6.41□□□□□ -1.38
PHGDH-225ENST00000641720 OR2T33Q8NG76 320 aa6.41□□□□□ -1.38
PHGDH-225ENST00000641720 DNAJC9Q8WXX5 260 aa6.41□□□□□ -1.38
PHGDH-225ENST00000641720 NSMAFQ92636 917 aa6.41□□□□□ -1.38
PHGDH-225ENST00000641720 BCL2L2Q92843 193 aaPredicted RBP6.41□□□□□ -1.38
PHGDH-225ENST00000641720 NABP1Q96AH0 204 aa6.41□□□□□ -1.38
PHGDH-225ENST00000641720 FOXN4Q96NZ1 517 aa6.41□□□□□ -1.38
PHGDH-225ENST00000641720 TSSK2Q96PF2 358 aa6.41□□□□□ -1.38
PHGDH-225ENST00000641720 MBOAT4Q96T53 435 aa6.41□□□□□ -1.38
PHGDH-225ENST00000641720 RBM4BQ9BQ04 359 aaKnown RBP6.41□□□□□ -1.38
PHGDH-225ENST00000641720 RHNO1Q9BSD3 238 aa6.41□□□□□ -1.38
PHGDH-225ENST00000641720 RBM4Q9BWF3 364 aaKnown RBP6.41□□□□□ -1.38
PHGDH-225ENST00000641720 CACNG6Q9BXT2 260 aa6.41□□□□□ -1.38
PHGDH-225ENST00000641720 GABARAPL3Q9BY60 117 aa6.41□□□□□ -1.38
PHGDH-225ENST00000641720 RIBC2Q9H4K1 309 aa6.41□□□□□ -1.38
PHGDH-225ENST00000641720 SLC25A19Q9HC21 320 aa6.41□□□□□ -1.38
PHGDH-225ENST00000641720 B3GAT2Q9NPZ5 323 aa6.41□□□□□ -1.38
PHGDH-225ENST00000641720 TMEM38BQ9NVV0 291 aa6.41□□□□□ -1.38
PHGDH-225ENST00000641720 USE1Q9NZ43 259 aa6.41□□□□□ -1.38
PHGDH-225ENST00000641720 CISD1Q9NZ45 108 aaKnown RBP6.41□□□□□ -1.38
PHGDH-225ENST00000641720 ZNF224Q9NZL3 707 aa6.41□□□□□ -1.38
PHGDH-225ENST00000641720 VSX1Q9NZR4 365 aaPredicted RBP6.41□□□□□ -1.38
PHGDH-225ENST00000641720 STX18Q9P2W9 335 aaKnown RBP6.41□□□□□ -1.38
PHGDH-225ENST00000641720 IGLV1-36A0A0B4J1U3 117 aa6.4□□□□□ -1.38
PHGDH-225ENST00000641720 IGHV4-61A0A0C4DH41 118 aa6.4□□□□□ -1.38
PHGDH-225ENST00000641720 A0A1W2PPL8 197 aa6.4□□□□□ -1.38
PHGDH-225ENST00000641720 CIB4A0PJX0 185 aa6.4□□□□□ -1.38
PHGDH-225ENST00000641720 OR5H1A6NKK0 313 aa6.4□□□□□ -1.38
PHGDH-225ENST00000641720 ZAR1LA6NP61 321 aa6.4□□□□□ -1.38
PHGDH-225ENST00000641720 ZNF99A8MXY4 864 aaPredicted RBP6.4□□□□□ -1.38
PHGDH-225ENST00000641720 DHHO43323 396 aa6.4□□□□□ -1.38
PHGDH-225ENST00000641720 IDH3BO43837 385 aa6.4□□□□□ -1.38
PHGDH-225ENST00000641720 GPANK1O95872 356 aa6.4□□□□□ -1.38
PHGDH-225ENST00000641720 SCG5P05408 212 aa6.4□□□□□ -1.38
PHGDH-225ENST00000641720 CDAP32320 146 aa6.4□□□□□ -1.38
PHGDH-225ENST00000641720 TTKP33981 857 aa6.4□□□□□ -1.38
PHGDH-225ENST00000641720 ALDH3A2P51648 485 aa6.4□□□□□ -1.38
PHGDH-225ENST00000641720 CRISP1P54107 249 aa6.4□□□□□ -1.38
PHGDH-225ENST00000641720 ESRRGP62508 458 aa6.4□□□□□ -1.38
PHGDH-225ENST00000641720 CDK5Q00535 292 aa6.4□□□□□ -1.38
PHGDH-225ENST00000641720 GINS1Q14691 196 aa6.4□□□□□ -1.38
PHGDH-225ENST00000641720 LRRC36Q1X8D7 754 aa6.4□□□□□ -1.38
PHGDH-225ENST00000641720 ZIK1Q3SY52 487 aaPredicted RBP6.4□□□□□ -1.38
PHGDH-225ENST00000641720 SLC27A4Q6P1M0 643 aa6.4□□□□□ -1.38
PHGDH-225ENST00000641720 ANKRD16Q6P6B7 361 aa6.4□□□□□ -1.38
PHGDH-225ENST00000641720 LYPD4Q6UWN0 246 aa6.4□□□□□ -1.38
PHGDH-225ENST00000641720 ZNF813Q6ZN06 617 aa6.4□□□□□ -1.38
PHGDH-225ENST00000641720 FOXL2NBQ6ZUU3 175 aa6.4□□□□□ -1.38
PHGDH-225ENST00000641720 ZNF627Q7L945 461 aa6.4□□□□□ -1.38
PHGDH-225ENST00000641720 ABHD12BQ7Z5M8 362 aaPredicted RBP6.4□□□□□ -1.38
PHGDH-225ENST00000641720 MYPOPQ86VE0 399 aaPredicted RBP6.4□□□□□ -1.38
PHGDH-225ENST00000641720 OR6V1Q8N148 313 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms