RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 DGAT2L6Q6ZPD8 337 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 MBOAT2Q6ZWT7 520 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 GPRIN1Q7Z2K8 1008 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 RETREG3Q86VR2 466 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 LILRA2Q8N149 483 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 KCNRGQ8N5I3 272 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 TEX29Q8N6K0 151 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 OR51F2Q8NH61 342 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 GALMQ96C23 342 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 TVP23CQ96ET8 276 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 TNFRSF19Q9NS68 423 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 DHCR7Q9UBM7 475 aaKnown RBP5.1□□□□□ -1.59
SCN1A-209ENST00000635750 ZMAT5Q9UDW3 170 aaKnown RBP5.1□□□□□ -1.59
SCN1A-209ENST00000635750 HCFC2Q9Y5Z7 792 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 CYR61O00622 381 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 GIPRP48546 466 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 SUMO1P63165 101 aaKnown RBP5.1□□□□□ -1.59
SCN1A-209ENST00000635750 H3F3AP84243 136 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 ZNF90Q03938 601 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 DRAM2Q6UX65 266 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 SSX7Q7RTT5 188 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 DCXRQ7Z4W1 244 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 LINC00346Q8IVM7 164 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 ARHGEF39Q8N4T4 335 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 OR52H1Q8NGJ2 320 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 PIGTQ969N2 578 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 POFUT1Q9H488 388 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 SEBOXQ9HB31 216 aaPredicted RBP5.1□□□□□ -1.59
SCN1A-209ENST00000635750 DCAF13Q9NV06 445 aaKnown RBP5.1□□□□□ -1.59
SCN1A-209ENST00000635750 CLEC5AQ9NY25 188 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 IL37Q9NZH6 218 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 STYXL1Q9Y6J8 313 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 OR6C68A6NDL8 312 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 TMEM200CA6NKL6 621 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 RBP4P02753 201 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 ITGAMP11215 1152 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 ADRA2CP18825 462 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 NME2P22392 152 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 SORDQ00796 357 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 SEMA3BQ13214 749 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 SMAD4Q13485 552 aaKnown RBP5.1□□□□□ -1.59
SCN1A-209ENST00000635750 ALKBH1Q13686 389 aaKnown RBP5.1□□□□□ -1.59
SCN1A-209ENST00000635750 ENDOGQ14249 297 aaKnown RBP5.1□□□□□ -1.59
SCN1A-209ENST00000635750 OXA1LQ15070 435 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 TBCEQ15813 527 aaPredicted RBP5.1□□□□□ -1.59
SCN1A-209ENST00000635750 VMA21Q3ZAQ7 101 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 SLC35D3Q5M8T2 416 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 ACSM5Q6NUN0 579 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 FA2HQ7L5A8 372 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 PNPLA1Q8N8W4 532 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 OR4F5Q8NH21 305 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 OR51H1Q8NH63 302 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 ROBO4Q8WZ75 1007 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 SEH1LQ96EE3 360 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 OR4F4Q96R69 305 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 GABARAPL1Q9H0R8 117 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 TAF9BQ9HBM6 251 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 SALL4Q9UJQ4 1053 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 UGT2A1Q9Y4X1 527 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 ASCC3Q8N3C0 2202 aaKnown RBP5.1□□□□□ -1.59
SCN1A-209ENST00000635750 UBL3O95164 117 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 SLC25A6P12236 298 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 RAB5AP20339 215 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 SSTR4P31391 388 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 NKX2-1P43699 371 aaPredicted RBP5.1□□□□□ -1.59
SCN1A-209ENST00000635750 DUSP2Q05923 314 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 OR4F15Q8NGB8 312 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 UBTD2Q8WUN7 234 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 TMEM56Q96MV1 263 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 RNF32Q9H0A6 362 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 MMP28Q9H239 520 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 UBE2ZQ9H832 354 aaPredicted RBP5.1□□□□□ -1.59
SCN1A-209ENST00000635750 AP5S1Q9NUS5 200 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 FKBP11Q9NYL4 201 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 SLCO1B1Q9Y6L6 691 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.1□□□□□ -1.59
SCN1A-209ENST00000635750 CLDN24A6NM45 220 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 FABP7O15540 132 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 T-ENOLP0DO92 83 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 CYBAP13498 195 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 BMP5P22003 454 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 DEFB103AP81534 67 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 TSPAN31Q12999 210 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 POU4F3Q15319 338 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 SHHQ15465 462 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 ELAVL1Q15717 326 aaKnown RBP5.1□□□□□ -1.59
SCN1A-209ENST00000635750 SPANXN5Q5MJ07 72 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 ANKRD16Q6P6B7 361 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 DLK2Q6UY11 383 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 ADAMTSL4Q6UY14 1074 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 CPEB2Q7Z5Q1 589 aaKnown RBP5.1□□□□□ -1.59
SCN1A-209ENST00000635750 ZDHHC23Q8IYP9 409 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 CLDN22Q8N7P3 220 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 CSF3RQ99062 836 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 LRFN3Q9BTN0 628 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 PHF7Q9BWX1 381 aaPredicted RBP5.1□□□□□ -1.59
SCN1A-209ENST00000635750 LHPPQ9H008 270 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 ZNF586Q9NXT0 402 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 SLC17A4Q9Y2C5 497 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 STRAPQ9Y3F4 350 aaKnown RBP5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms