RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 HPNP05981 417 aa4.28□□□□□ -1.72
LINC00550-201ENST00000629293 CPMP14384 443 aa4.28□□□□□ -1.72
LINC00550-201ENST00000629293 CSNK2A2P19784 350 aaPredicted RBP4.28□□□□□ -1.72
LINC00550-201ENST00000629293 PTNP21246 168 aa4.28□□□□□ -1.72
LINC00550-201ENST00000629293 IL12BP29460 328 aa4.28□□□□□ -1.72
LINC00550-201ENST00000629293 PRKAR1BP31321 381 aa4.28□□□□□ -1.72
LINC00550-201ENST00000629293 S100A5P33763 92 aa4.28□□□□□ -1.72
LINC00550-201ENST00000629293 OMPP47874 163 aa4.28□□□□□ -1.72
LINC00550-201ENST00000629293 GINS1Q14691 196 aa4.28□□□□□ -1.72
LINC00550-201ENST00000629293 PAQR6Q6TCH4 344 aa4.28□□□□□ -1.72
LINC00550-201ENST00000629293 RASSF6Q6ZTQ3 369 aa4.28□□□□□ -1.72
LINC00550-201ENST00000629293 CCDC28AQ8IWP9 274 aa4.28□□□□□ -1.72
LINC00550-201ENST00000629293 OR52R1Q8NGF1 315 aa4.28□□□□□ -1.72
LINC00550-201ENST00000629293 OR9A2Q8NGT5 310 aa4.28□□□□□ -1.72
LINC00550-201ENST00000629293 TMEM163Q8TC26 289 aa4.28□□□□□ -1.72
LINC00550-201ENST00000629293 TMEM171Q8WVE6 324 aa4.28□□□□□ -1.72
LINC00550-201ENST00000629293 PIK3R3Q92569 461 aa4.28□□□□□ -1.72
LINC00550-201ENST00000629293 TMEM185BQ9H7F4 350 aa4.28□□□□□ -1.72
LINC00550-201ENST00000629293 ISYNA1Q9NPH2 558 aa4.28□□□□□ -1.72
LINC00550-201ENST00000629293 TVP23BQ9NYZ1 205 aa4.28□□□□□ -1.72
LINC00550-201ENST00000629293 LIPT1Q9Y234 373 aa4.28□□□□□ -1.72
LINC00550-201ENST00000629293 PNMA8CA0A1B0GUJ8 204 aa4.28□□□□□ -1.72
LINC00550-201ENST00000629293 A0A1W2PNV4 684 aa4.28□□□□□ -1.72
LINC00550-201ENST00000629293 FAM90A18PA6NE21 464 aa4.28□□□□□ -1.72
LINC00550-201ENST00000629293 FAM90A16PA6NEW6 464 aa4.28□□□□□ -1.72
LINC00550-201ENST00000629293 FAM90A20PA6NIJ5 464 aa4.28□□□□□ -1.72
LINC00550-201ENST00000629293 OR6C76A6NM76 312 aa4.28□□□□□ -1.72
LINC00550-201ENST00000629293 FAM90A9PA6NNJ1 464 aa4.28□□□□□ -1.72
LINC00550-201ENST00000629293 FAM90A5PA8MXJ8 464 aa4.28□□□□□ -1.72
LINC00550-201ENST00000629293 TLX2O43763 284 aaPredicted RBP4.28□□□□□ -1.72
LINC00550-201ENST00000629293 ATP6V1G1O75348 118 aa4.28□□□□□ -1.72
LINC00550-201ENST00000629293 CYP7B1O75881 506 aa4.28□□□□□ -1.72
LINC00550-201ENST00000629293 FAM90A15PP0C7V4 464 aa4.28□□□□□ -1.72
LINC00550-201ENST00000629293 FAM90A14PP0C7W9 464 aa4.28□□□□□ -1.72
LINC00550-201ENST00000629293 ACP2P11117 423 aa4.28□□□□□ -1.72
LINC00550-201ENST00000629293 GTF2E2P29084 291 aaKnown RBP4.28□□□□□ -1.72
LINC00550-201ENST00000629293 RPS19P39019 145 aaKnown RBP4.28□□□□□ -1.72
LINC00550-201ENST00000629293 ETV1P50549 477 aa4.28□□□□□ -1.72
LINC00550-201ENST00000629293 IGLV3-21P80748 117 aaPredicted RBP4.28□□□□□ -1.72
LINC00550-201ENST00000629293 TSPAN31Q12999 210 aa4.28□□□□□ -1.72
LINC00550-201ENST00000629293 SELENBP1Q13228 472 aa4.28□□□□□ -1.72
LINC00550-201ENST00000629293 ACKR1Q16570 336 aa4.28□□□□□ -1.72
LINC00550-201ENST00000629293 PRICKLE4Q2TBC4 344 aa4.28□□□□□ -1.72
LINC00550-201ENST00000629293 PLEKHM3Q6ZWE6 761 aa4.28□□□□□ -1.72
LINC00550-201ENST00000629293 SZRD1Q7Z422 152 aa4.28□□□□□ -1.72
LINC00550-201ENST00000629293 CLIP4Q8N3C7 705 aa4.28□□□□□ -1.72
LINC00550-201ENST00000629293 GNPDA2Q8TDQ7 276 aa4.28□□□□□ -1.72
LINC00550-201ENST00000629293 ZNF845Q96IR2 970 aaPredicted RBP4.28□□□□□ -1.72
LINC00550-201ENST00000629293 LRR1Q96L50 414 aa4.28□□□□□ -1.72
LINC00550-201ENST00000629293 EGLN3Q9H6Z9 239 aa4.28□□□□□ -1.72
LINC00550-201ENST00000629293 CALHM2Q9HA72 323 aa4.28□□□□□ -1.72
LINC00550-201ENST00000629293 CALML5Q9NZT1 146 aa4.28□□□□□ -1.72
LINC00550-201ENST00000629293 CRNNQ9UBG3 495 aaPredicted RBP4.28□□□□□ -1.72
LINC00550-201ENST00000629293 TBC1D24Q9ULP9 559 aa4.28□□□□□ -1.72
LINC00550-201ENST00000629293 CAB39Q9Y376 341 aaPredicted RBP4.28□□□□□ -1.72
LINC00550-201ENST00000629293 IRGMA1A4Y4 181 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 PGPEP1LA6NFU8 196 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 C16orf97H3BN30 126 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 CTDSP2O14595 271 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 MYL12BO14950 172 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 CBR3O75828 277 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 NTN1O95631 604 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 ACTL6AO96019 429 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 PLAUP00749 431 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 THY1P04216 161 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 CSF1P09603 554 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 RPS4Y1P22090 263 aaKnown RBP4.27□□□□□ -1.73
LINC00550-201ENST00000629293 FPR3P25089 353 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 TNFSF8P32971 234 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 VAMP2P63027 116 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 PSPHP78330 225 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 RAB40BQ12829 278 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 TPBGQ13641 420 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 TRAM2Q15035 370 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 PON3Q15166 354 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 ZNF79Q15937 498 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 DECR1Q16698 335 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 MFSD12Q6NUT3 480 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 CDC73Q6P1J9 531 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 CD200R1LQ6Q8B3 271 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 ZNF474Q6S9Z5 364 aaPredicted RBP4.27□□□□□ -1.73
LINC00550-201ENST00000629293 FRRS1Q6ZNA5 592 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 GDPD3Q7L5L3 318 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 HMGN2P46Q86SG4 172 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 VRK2Q86Y07 508 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 PLCZ1Q86YW0 608 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 DND1Q8IYX4 353 aaKnown RBP4.27□□□□□ -1.73
LINC00550-201ENST00000629293 POC5Q8NA72 575 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 ADIPOR1Q96A54 375 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 ZG16BQ96DA0 208 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 LCORQ96JN0 433 aaPredicted RBP4.27□□□□□ -1.73
LINC00550-201ENST00000629293 SLC30A2Q9BRI3 323 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 ZNF649Q9BS31 505 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 ACTRT3Q9BYD9 372 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 POLR2J2Q9GZM3 115 aaKnown RBP4.27□□□□□ -1.73
LINC00550-201ENST00000629293 NUAK2Q9H093 628 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 YAE1D1Q9NRH1 226 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 PLSCR4Q9NRQ2 329 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 GIMAP4Q9NUV9 329 aa4.27□□□□□ -1.73
LINC00550-201ENST00000629293 MED11Q9P086 117 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms