RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 M0R143 59 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 ZNF264O43296 627 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 ANGPTL7O43827 346 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 CST4P01036 141 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 CSNK1A1P48729 337 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 TLE1Q04724 770 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 AGBL4Q5VU57 503 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 PPP1R3BQ86XI6 285 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 NKAIN4Q8IVV8 208 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 GCNT2Q8N0V5 402 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 EXD3Q8N9H8 876 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 DTWD2Q8NBA8 298 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 OR5M1Q8NGP8 315 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 OR13D1Q8NGV5 346 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 CHAC2Q8WUX2 184 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 FGGYQ96C11 551 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 SAT2Q96F10 170 aaPredicted RBP8.18□□□□□ -1.1
VCL-206ENST00000623461 TIMM29Q9BSF4 260 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 ABHD6Q9BV23 337 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 RBM24Q9BX46 236 aaKnown RBP8.18□□□□□ -1.1
VCL-206ENST00000623461 HIPK2Q9H2X6 1198 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 C17orf105B2RV13 164 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 LIPNQ5VXI9 398 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 PLCXD3Q63HM9 321 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 SLC48A1Q6P1K1 146 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 OVCH2Q7RTZ1 564 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 MRPL21Q7Z2W9 205 aaKnown RBP8.18□□□□□ -1.1
VCL-206ENST00000623461 SYT9Q86SS6 491 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 LMX1AQ8TE12 382 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 PTP4A1Q93096 173 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 ZNF426Q9BUY5 554 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 EDEM2Q9BV94 578 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 C11orf49Q9H6J7 331 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 PLEK2Q9NYT0 353 aa8.18□□□□□ -1.1
VCL-206ENST00000623461 POM121BA6NF01 834 aa8.17□□□□□ -1.1
VCL-206ENST00000623461 GSTZ1O43708 216 aaPredicted RBP8.17□□□□□ -1.1
VCL-206ENST00000623461 SUSD5O60279 629 aa8.17□□□□□ -1.1
VCL-206ENST00000623461 LDB3O75112 727 aa8.17□□□□□ -1.1
VCL-206ENST00000623461 SULT1A3P0DMM9 295 aa8.17□□□□□ -1.1
VCL-206ENST00000623461 SULT1A4P0DMN0 295 aa8.17□□□□□ -1.1
VCL-206ENST00000623461 DTYMKP23919 212 aa8.17□□□□□ -1.1
VCL-206ENST00000623461 TMEM201Q5SNT2 666 aa8.17□□□□□ -1.1
VCL-206ENST00000623461 TMEM184AQ6ZMB5 413 aa8.17□□□□□ -1.1
VCL-206ENST00000623461 ESPNLQ6ZVH7 1005 aa8.17□□□□□ -1.1
VCL-206ENST00000623461 FAM57BQ71RH2 274 aa8.17□□□□□ -1.1
VCL-206ENST00000623461 SLC35D2Q76EJ3 337 aa8.17□□□□□ -1.1
VCL-206ENST00000623461 GMLQ99445 158 aa8.17□□□□□ -1.1
VCL-206ENST00000623461 NXF2Q9GZY0 626 aaKnown RBP8.17□□□□□ -1.1
VCL-206ENST00000623461 MIOXQ9UGB7 285 aa8.17□□□□□ -1.1
VCL-206ENST00000623461 ARFGEF1Q9Y6D6 1849 aa8.17□□□□□ -1.1
VCL-206ENST00000623461 A0A087X0M5 115 aa8.17□□□□□ -1.1
VCL-206ENST00000623461 A0A1B0GX30 115 aa8.17□□□□□ -1.1
VCL-206ENST00000623461 A0A1W2PQU0 124 aa8.17□□□□□ -1.1
VCL-206ENST00000623461 SLC6A12P48065 614 aa8.17□□□□□ -1.1
VCL-206ENST00000623461 PHF19Q5T6S3 580 aa8.17□□□□□ -1.1
VCL-206ENST00000623461 RAET1LQ5VY80 246 aa8.17□□□□□ -1.1
VCL-206ENST00000623461 MFSD12Q6NUT3 480 aa8.17□□□□□ -1.1
VCL-206ENST00000623461 MCATQ8IVS2 390 aaKnown RBP8.17□□□□□ -1.1
VCL-206ENST00000623461 TMEM217Q8N7C4 229 aa8.17□□□□□ -1.1
VCL-206ENST00000623461 VAMP8Q9BV40 100 aa8.17□□□□□ -1.1
VCL-206ENST00000623461 PARP12Q9H0J9 701 aaKnown RBP8.17□□□□□ -1.1
VCL-206ENST00000623461 MBLAC1A4D2B0 266 aaPredicted RBP8.17□□□□□ -1.1
VCL-206ENST00000623461 C2orf76Q3KRA6 126 aa8.17□□□□□ -1.1
VCL-206ENST00000623461 MARCH8Q5T0T0 291 aa8.17□□□□□ -1.1
VCL-206ENST00000623461 AADACL3Q5VUY0 350 aa8.17□□□□□ -1.1
VCL-206ENST00000623461 MRM1Q6IN84 353 aaKnown RBP8.17□□□□□ -1.1
VCL-206ENST00000623461 FAAP20Q6NZ36 180 aa8.17□□□□□ -1.1
VCL-206ENST00000623461 NANOS1Q8WY41 292 aaKnown RBP8.17□□□□□ -1.1
VCL-206ENST00000623461 HINT2Q9BX68 163 aa8.17□□□□□ -1.1
VCL-206ENST00000623461 PLK3Q9H4B4 646 aa8.17□□□□□ -1.1
VCL-206ENST00000623461 PARD6AQ9NPB6 346 aa8.17□□□□□ -1.1
VCL-206ENST00000623461 PLEKHB1Q9UF11 243 aaPredicted RBP8.17□□□□□ -1.1
VCL-206ENST00000623461 PADI1Q9ULC6 663 aa8.17□□□□□ -1.1
VCL-206ENST00000623461 F6UZH7 168 aa8.17□□□□□ -1.1
VCL-206ENST00000623461 MAN2B1O00754 1011 aa8.17□□□□□ -1.1
VCL-206ENST00000623461 PKIAP61925 76 aa8.17□□□□□ -1.1
VCL-206ENST00000623461 HIST1H3AP68431 136 aa8.17□□□□□ -1.1
VCL-206ENST00000623461 GPNMBQ14956 572 aa8.17□□□□□ -1.1
VCL-206ENST00000623461 SLC25A35Q3KQZ1 300 aa8.17□□□□□ -1.1
VCL-206ENST00000623461 NPSR1Q6W5P4 371 aa8.17□□□□□ -1.1
VCL-206ENST00000623461 GTF2H5Q6ZYL4 71 aa8.17□□□□□ -1.1
VCL-206ENST00000623461 ANGPTL5Q86XS5 388 aa8.17□□□□□ -1.1
VCL-206ENST00000623461 PFN4Q8NHR9 129 aa8.17□□□□□ -1.1
VCL-206ENST00000623461 NUDT8Q8WV74 236 aa8.17□□□□□ -1.1
VCL-206ENST00000623461 CUTCQ9NTM9 273 aa8.17□□□□□ -1.1
VCL-206ENST00000623461 OTOL1A6NHN0 477 aaPredicted RBP8.17□□□□□ -1.1
VCL-206ENST00000623461 TRAPPC2LH3BP13 241 aa8.17□□□□□ -1.1
VCL-206ENST00000623461 P2RY10O00398 339 aa8.17□□□□□ -1.1
VCL-206ENST00000623461 ZNF85Q03923 595 aa8.17□□□□□ -1.1
VCL-206ENST00000623461 RBPJQ06330 500 aa8.17□□□□□ -1.1
VCL-206ENST00000623461 ARHGAP11BQ3KRB8 267 aa8.17□□□□□ -1.1
VCL-206ENST00000623461 NCR3LG1Q68D85 454 aa8.17□□□□□ -1.1
VCL-206ENST00000623461 GLIPR1L1Q6UWM5 242 aa8.17□□□□□ -1.1
VCL-206ENST00000623461 HTR3DQ70Z44 454 aa8.17□□□□□ -1.1
VCL-206ENST00000623461 PPP1R35Q8TAP8 253 aa8.17□□□□□ -1.1
VCL-206ENST00000623461 ABCA3Q99758 1704 aa8.17□□□□□ -1.1
VCL-206ENST00000623461 ANKRD30BLA7E2S9 258 aa8.17□□□□□ -1.1
VCL-206ENST00000623461 WNT1P04628 370 aa8.17□□□□□ -1.1
VCL-206ENST00000623461 CHRM4P08173 479 aa8.17□□□□□ -1.1
VCL-206ENST00000623461 GABRA1P14867 456 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms