RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 PCGF3Q3KNV8 242 aa8.45□□□□□ -1.06
PDPN-212ENST00000621990 ZNF385CQ66K41 422 aaPredicted RBP8.45□□□□□ -1.06
PDPN-212ENST00000621990 FAAP20Q6NZ36 180 aa8.45□□□□□ -1.06
PDPN-212ENST00000621990 MDGA2Q7Z553 956 aa8.45□□□□□ -1.06
PDPN-212ENST00000621990 ZNF680Q8NEM1 530 aa8.45□□□□□ -1.06
PDPN-212ENST00000621990 PPP1R14AQ96A00 147 aa8.45□□□□□ -1.06
PDPN-212ENST00000621990 OR2A7Q96R45 310 aa8.45□□□□□ -1.06
PDPN-212ENST00000621990 POTEKPQ9BYX7 375 aa8.45□□□□□ -1.06
PDPN-212ENST00000621990 METTL17Q9H7H0 456 aaPredicted RBP8.45□□□□□ -1.06
PDPN-212ENST00000621990 BEX1Q9HBH7 125 aa8.45□□□□□ -1.06
PDPN-212ENST00000621990 CHST11Q9NPF2 352 aa8.45□□□□□ -1.06
PDPN-212ENST00000621990 CKLFQ9UBR5 152 aa8.45□□□□□ -1.06
PDPN-212ENST00000621990 PISDQ9UG56 409 aa8.45□□□□□ -1.06
PDPN-212ENST00000621990 U3KQA8 63 aa8.45□□□□□ -1.06
PDPN-212ENST00000621990 CACNA1EQ15878 2313 aa8.44□□□□□ -1.06
PDPN-212ENST00000621990 TMEM272A0A1B0GTI8 110 aa8.44□□□□□ -1.06
PDPN-212ENST00000621990 LIPT2A6NK58 231 aa8.44□□□□□ -1.06
PDPN-212ENST00000621990 SOX1O00570 391 aaPredicted RBP8.44□□□□□ -1.06
PDPN-212ENST00000621990 DOK2O60496 412 aa8.44□□□□□ -1.06
PDPN-212ENST00000621990 TIAF1O95411 115 aa8.44□□□□□ -1.06
PDPN-212ENST00000621990 CD2P06729 351 aa8.44□□□□□ -1.06
PDPN-212ENST00000621990 HEXBP07686 556 aa8.44□□□□□ -1.06
PDPN-212ENST00000621990 GIPP09681 153 aaPredicted RBP8.44□□□□□ -1.06
PDPN-212ENST00000621990 ACHEP22303 614 aa8.44□□□□□ -1.06
PDPN-212ENST00000621990 ARRB1P49407 418 aaPredicted RBP8.44□□□□□ -1.06
PDPN-212ENST00000621990 RBMS2Q15434 407 aaKnown RBP8.44□□□□□ -1.06
PDPN-212ENST00000621990 GLT8D1Q68CQ7 371 aa8.44□□□□□ -1.06
PDPN-212ENST00000621990 SLC25A25Q6KCM7 469 aa8.44□□□□□ -1.06
PDPN-212ENST00000621990 SLC36A1Q7Z2H8 476 aa8.44□□□□□ -1.06
PDPN-212ENST00000621990 BPHLQ86WA6 291 aaPredicted RBP8.44□□□□□ -1.06
PDPN-212ENST00000621990 OR4C16Q8NGL9 310 aa8.44□□□□□ -1.06
PDPN-212ENST00000621990 OR2T35Q8NGX2 323 aa8.44□□□□□ -1.06
PDPN-212ENST00000621990 OR6N1Q8NGY5 312 aa8.44□□□□□ -1.06
PDPN-212ENST00000621990 PTX4Q96A99 478 aa8.44□□□□□ -1.06
PDPN-212ENST00000621990 DDIT4LQ96D03 193 aa8.44□□□□□ -1.06
PDPN-212ENST00000621990 FAM117AQ9C073 453 aa8.44□□□□□ -1.06
PDPN-212ENST00000621990 ALKBH4Q9NXW9 302 aa8.44□□□□□ -1.06
PDPN-212ENST00000621990 CDV3Q9UKY7 258 aaKnown RBP8.44□□□□□ -1.06
PDPN-212ENST00000621990 B3GALT5Q9Y2C3 310 aa8.44□□□□□ -1.06
PDPN-212ENST00000621990 RHBDD3Q9Y3P4 386 aa8.44□□□□□ -1.06
PDPN-212ENST00000621990 MEGF11A6BM72 1044 aa8.44□□□□□ -1.06
PDPN-212ENST00000621990 LINC00862A6NCI5 91 aa8.44□□□□□ -1.06
PDPN-212ENST00000621990 NPIPA5E9PKD4 350 aa8.44□□□□□ -1.06
PDPN-212ENST00000621990 SULT1C2O00338 296 aa8.44□□□□□ -1.06
PDPN-212ENST00000621990 CREBL2O60519 120 aaPredicted RBP8.44□□□□□ -1.06
PDPN-212ENST00000621990 SNAPC5O75971 98 aa8.44□□□□□ -1.06
PDPN-212ENST00000621990 SLC22A5O76082 557 aa8.44□□□□□ -1.06
PDPN-212ENST00000621990 MELTFP08582 738 aa8.44□□□□□ -1.06
PDPN-212ENST00000621990 GABRA1P14867 456 aa8.44□□□□□ -1.06
PDPN-212ENST00000621990 ANXA7P20073 488 aaKnown RBP8.44□□□□□ -1.06
PDPN-212ENST00000621990 MSX1P28360 303 aa8.44□□□□□ -1.06
PDPN-212ENST00000621990 MMP16P51512 607 aa8.44□□□□□ -1.06
PDPN-212ENST00000621990 HSF1Q00613 529 aa8.44□□□□□ -1.06
PDPN-212ENST00000621990 OR7A5Q15622 319 aa8.44□□□□□ -1.06
PDPN-212ENST00000621990 OR5M10Q6IEU7 315 aa8.44□□□□□ -1.06
PDPN-212ENST00000621990 ARSKQ6UWY0 536 aa8.44□□□□□ -1.06
PDPN-212ENST00000621990 UXS1Q8NBZ7 420 aa8.44□□□□□ -1.06
PDPN-212ENST00000621990 CLEC1AQ8NC01 280 aa8.44□□□□□ -1.06
PDPN-212ENST00000621990 OR8H1Q8NGG4 311 aa8.44□□□□□ -1.06
PDPN-212ENST00000621990 OR6M1Q8NGM8 313 aa8.44□□□□□ -1.06
PDPN-212ENST00000621990 GPX8Q8TED1 209 aa8.44□□□□□ -1.06
PDPN-212ENST00000621990 RNF133Q8WVZ7 376 aa8.44□□□□□ -1.06
PDPN-212ENST00000621990 DACT3Q96B18 629 aaPredicted RBP8.44□□□□□ -1.06
PDPN-212ENST00000621990 SEC22CQ9BRL7 303 aa8.44□□□□□ -1.06
PDPN-212ENST00000621990 PRO3102Q9H379 93 aa8.44□□□□□ -1.06
PDPN-212ENST00000621990 GPN1Q9HCN4 374 aaPredicted RBP8.44□□□□□ -1.06
PDPN-212ENST00000621990 TAS2R4Q9NYW5 299 aa8.44□□□□□ -1.06
PDPN-212ENST00000621990 HHLA2Q9UM44 414 aa8.44□□□□□ -1.06
PDPN-212ENST00000621990 NPIPA1Q9UND3 350 aa8.44□□□□□ -1.06
PDPN-212ENST00000621990 HRH3Q9Y5N1 445 aa8.44□□□□□ -1.06
PDPN-212ENST00000621990 TNRC6BQ9UPQ9 1833 aaKnown RBP8.43□□□□□ -1.06
PDPN-212ENST00000621990 A0A0A6YYH2 397 aa8.43□□□□□ -1.06
PDPN-212ENST00000621990 A0A1W2PQ72 361 aa8.43□□□□□ -1.06
PDPN-212ENST00000621990 OR2M5A3KFT3 312 aa8.43□□□□□ -1.06
PDPN-212ENST00000621990 A6NJ64 397 aa8.43□□□□□ -1.06
PDPN-212ENST00000621990 H3BSH0 61 aa8.43□□□□□ -1.06
PDPN-212ENST00000621990 PYCARD-AS1I3L0S3 204 aa8.43□□□□□ -1.06
PDPN-212ENST00000621990 KDM4BO94953 1096 aa8.43□□□□□ -1.06
PDPN-212ENST00000621990 CYC1P08574 325 aa8.43□□□□□ -1.06
PDPN-212ENST00000621990 HTR2CP28335 458 aa8.43□□□□□ -1.06
PDPN-212ENST00000621990 PTGDSP41222 190 aa8.43□□□□□ -1.06
PDPN-212ENST00000621990 OR3A3P47888 321 aa8.43□□□□□ -1.06
PDPN-212ENST00000621990 DCDP81605 110 aaKnown RBP8.43□□□□□ -1.06
PDPN-212ENST00000621990 FMODQ06828 376 aa8.43□□□□□ -1.06
PDPN-212ENST00000621990 FOXF1Q12946 379 aa8.43□□□□□ -1.06
PDPN-212ENST00000621990 C1QTNF12Q5T7M4 302 aa8.43□□□□□ -1.06
PDPN-212ENST00000621990 DCXRQ7Z4W1 244 aa8.43□□□□□ -1.06
PDPN-212ENST00000621990 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.43□□□□□ -1.06
PDPN-212ENST00000621990 KDM8Q8N371 416 aa8.43□□□□□ -1.06
PDPN-212ENST00000621990 PLPP7Q8NBV4 271 aa8.43□□□□□ -1.06
PDPN-212ENST00000621990 ADPRHL1Q8NDY3 354 aa8.43□□□□□ -1.06
PDPN-212ENST00000621990 MRGPRX4Q96LA9 322 aa8.43□□□□□ -1.06
PDPN-212ENST00000621990 OR6C1Q96RD1 312 aa8.43□□□□□ -1.06
PDPN-212ENST00000621990 DUSP23Q9BVJ7 150 aa8.43□□□□□ -1.06
PDPN-212ENST00000621990 TMPRSS13Q9BYE2 586 aa8.43□□□□□ -1.06
PDPN-212ENST00000621990 SLC7A5P2Q9GIP4 190 aa8.43□□□□□ -1.06
PDPN-212ENST00000621990 IRF2BPLQ9H1B7 796 aa8.43□□□□□ -1.06
PDPN-212ENST00000621990 SLC26A1Q9H2B4 701 aa8.43□□□□□ -1.06
PDPN-212ENST00000621990 CA10Q9NS85 328 aa8.43□□□□□ -1.06
PDPN-212ENST00000621990 MED11Q9P086 117 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms