RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 ADGRF3Q8IZF5 1079 aa13.43□□□□□ -0.26
SNPH-203ENST00000614659 ZNF511Q8NB15 262 aa13.43□□□□□ -0.26
SNPH-203ENST00000614659 CSF3RQ99062 836 aa13.43□□□□□ -0.26
SNPH-203ENST00000614659 CNTNAP3Q9BZ76 1288 aa13.43□□□□□ -0.26
SNPH-203ENST00000614659 SRRQ9GZT4 340 aa13.43□□□□□ -0.26
SNPH-203ENST00000614659 NDRG3Q9UGV2 375 aa13.43□□□□□ -0.26
SNPH-203ENST00000614659 GREB1LQ9C091 1923 aaPredicted RBP13.43□□□□□ -0.26
SNPH-203ENST00000614659 TUBAL3A6NHL2 446 aa13.43□□□□□ -0.26
SNPH-203ENST00000614659 NUDT19A8MXV4 375 aa13.43□□□□□ -0.26
SNPH-203ENST00000614659 ZNF136P52737 540 aa13.43□□□□□ -0.26
SNPH-203ENST00000614659 CLDN12P56749 244 aa13.43□□□□□ -0.26
SNPH-203ENST00000614659 FABP5Q01469 135 aa13.43□□□□□ -0.26
SNPH-203ENST00000614659 MOB3CQ70IA8 216 aa13.43□□□□□ -0.26
SNPH-203ENST00000614659 MARCH3Q86UD3 253 aa13.43□□□□□ -0.26
SNPH-203ENST00000614659 ANKRD53Q8N9V6 530 aa13.43□□□□□ -0.26
SNPH-203ENST00000614659 HAS2Q92819 552 aa13.43□□□□□ -0.26
SNPH-203ENST00000614659 ACOXLQ9NUZ1 547 aa13.43□□□□□ -0.26
SNPH-203ENST00000614659 TRAV17A0A0B4J275 112 aa13.43□□□□□ -0.26
SNPH-203ENST00000614659 FRG2CA6NGY1 282 aa13.43□□□□□ -0.26
SNPH-203ENST00000614659 FADS1O60427 444 aa13.43□□□□□ -0.26
SNPH-203ENST00000614659 FGF9P31371 208 aaPredicted RBP13.43□□□□□ -0.26
SNPH-203ENST00000614659 RFX2P48378 723 aa13.43□□□□□ -0.26
SNPH-203ENST00000614659 SLC14A1Q13336 389 aa13.43□□□□□ -0.26
SNPH-203ENST00000614659 DOK3Q7L591 496 aa13.43□□□□□ -0.26
SNPH-203ENST00000614659 OR13C9Q8NGT0 318 aa13.43□□□□□ -0.26
SNPH-203ENST00000614659 SCARB1Q8WTV0 552 aa13.43□□□□□ -0.26
SNPH-203ENST00000614659 MRGPRX3Q96LB0 322 aa13.43□□□□□ -0.26
SNPH-203ENST00000614659 CD300LBA8K4G0 201 aa13.43□□□□□ -0.26
SNPH-203ENST00000614659 KLK10O43240 276 aa13.43□□□□□ -0.26
SNPH-203ENST00000614659 IGFBP1P08833 259 aaPredicted RBP13.43□□□□□ -0.26
SNPH-203ENST00000614659 HIST1H1CP16403 213 aaKnown RBP13.43□□□□□ -0.26
SNPH-203ENST00000614659 SELEP16581 610 aa13.43□□□□□ -0.26
SNPH-203ENST00000614659 CDK5Q00535 292 aa13.43□□□□□ -0.26
SNPH-203ENST00000614659 Q6ZTK2 550 aa13.43□□□□□ -0.26
SNPH-203ENST00000614659 APH1AQ96BI3 265 aa13.43□□□□□ -0.26
SNPH-203ENST00000614659 CNRIP1Q96F85 164 aaPredicted RBP13.43□□□□□ -0.26
SNPH-203ENST00000614659 RNF167Q9H6Y7 350 aa13.43□□□□□ -0.26
SNPH-203ENST00000614659 CHST11Q9NPF2 352 aa13.43□□□□□ -0.26
SNPH-203ENST00000614659 OBP2BQ9NPH6 170 aa13.43□□□□□ -0.26
SNPH-203ENST00000614659 VSX1Q9NZR4 365 aaPredicted RBP13.43□□□□□ -0.26
SNPH-203ENST00000614659 ATAD5Q96QE3 1844 aa13.43□□□□□ -0.26
SNPH-203ENST00000614659 ALX3O95076 343 aa13.42□□□□□ -0.26
SNPH-203ENST00000614659 TK1P04183 234 aa13.42□□□□□ -0.26
SNPH-203ENST00000614659 WDR5BQ86VZ2 330 aa13.42□□□□□ -0.26
SNPH-203ENST00000614659 NAXDQ8IW45 347 aa13.42□□□□□ -0.26
SNPH-203ENST00000614659 OR10K1Q8NGX5 313 aa13.42□□□□□ -0.26
SNPH-203ENST00000614659 TMEM100Q9NV29 134 aa13.42□□□□□ -0.26
SNPH-203ENST00000614659 KIAA0100Q14667 2235 aaKnown RBP13.42□□□□□ -0.26
SNPH-203ENST00000614659 TOR1AO14656 332 aa13.42□□□□□ -0.26
SNPH-203ENST00000614659 RGS11O94810 467 aa13.42□□□□□ -0.26
SNPH-203ENST00000614659 MT-CO2P00403 227 aa13.42□□□□□ -0.26
SNPH-203ENST00000614659 CD1EP15812 388 aa13.42□□□□□ -0.26
SNPH-203ENST00000614659 ZNF93P35789 620 aaPredicted RBP13.42□□□□□ -0.26
SNPH-203ENST00000614659 SNU13P55769 128 aaKnown RBP13.42□□□□□ -0.26
SNPH-203ENST00000614659 PCBP4P57723 403 aaKnown RBP13.42□□□□□ -0.26
SNPH-203ENST00000614659 SQSTM1Q13501 440 aa13.42□□□□□ -0.26
SNPH-203ENST00000614659 EXOSC6Q5RKV6 272 aaKnown RBP13.42□□□□□ -0.26
SNPH-203ENST00000614659 RNLSQ5VYX0 342 aa13.42□□□□□ -0.26
SNPH-203ENST00000614659 LRP5LA4QPB2 252 aa13.42□□□□□ -0.26
SNPH-203ENST00000614659 WISP3O95389 354 aaPredicted RBP13.42□□□□□ -0.26
SNPH-203ENST00000614659 CSF3P09919 207 aa13.42□□□□□ -0.26
SNPH-203ENST00000614659 SUMO3P55854 103 aaPredicted RBP13.42□□□□□ -0.26
SNPH-203ENST00000614659 HTD2P86397 168 aa13.42□□□□□ -0.26
SNPH-203ENST00000614659 MFAP5Q13361 173 aa13.42□□□□□ -0.26
SNPH-203ENST00000614659 ARIH2OSQ8N7S6 290 aa13.42□□□□□ -0.26
SNPH-203ENST00000614659 GJC3Q8NFK1 279 aa13.42□□□□□ -0.26
SNPH-203ENST00000614659 SLC6A13Q9NSD5 602 aa13.42□□□□□ -0.26
SNPH-203ENST00000614659 LRRC30A6NM36 301 aa13.42□□□□□ -0.26
SNPH-203ENST00000614659 ERVK-16P61578 105 aa13.42□□□□□ -0.26
SNPH-203ENST00000614659 RBM39Q14498 530 aaKnown RBP13.42□□□□□ -0.26
SNPH-203ENST00000614659 ESPNLQ6ZVH7 1005 aa13.42□□□□□ -0.26
SNPH-203ENST00000614659 MDGA2Q7Z553 956 aa13.42□□□□□ -0.26
SNPH-203ENST00000614659 TP53I13Q8NBR0 393 aaPredicted RBP13.42□□□□□ -0.26
SNPH-203ENST00000614659 PXT1Q8NFP0 134 aa13.42□□□□□ -0.26
SNPH-203ENST00000614659 TIMD4Q96H15 378 aa13.42□□□□□ -0.26
SNPH-203ENST00000614659 SLIRPQ9GZT3 109 aaKnown RBP13.42□□□□□ -0.26
SNPH-203ENST00000614659 EGLN1Q9GZT9 426 aa13.42□□□□□ -0.26
SNPH-203ENST00000614659 SNRPGP15A8MWD9 76 aa13.41□□□□□ -0.26
SNPH-203ENST00000614659 P2RY10O00398 339 aa13.41□□□□□ -0.26
SNPH-203ENST00000614659 TBPP20226 339 aa13.41□□□□□ -0.26
SNPH-203ENST00000614659 PLA2G7Q13093 441 aa13.41□□□□□ -0.26
SNPH-203ENST00000614659 LIPNQ5VXI9 398 aa13.41□□□□□ -0.26
SNPH-203ENST00000614659 SLC22A25Q6T423 547 aa13.41□□□□□ -0.26
SNPH-203ENST00000614659 PAQR6Q6TCH4 344 aa13.41□□□□□ -0.26
SNPH-203ENST00000614659 ATF6BQ99941 703 aa13.41□□□□□ -0.26
SNPH-203ENST00000614659 D6RAR5 112 aa13.41□□□□□ -0.26
SNPH-203ENST00000614659 ATP6V1G2-DDX39BF2Z307 99 aa13.41□□□□□ -0.26
SNPH-203ENST00000614659 HTR5AP47898 357 aa13.41□□□□□ -0.26
SNPH-203ENST00000614659 CCR6P51684 374 aa13.41□□□□□ -0.26
SNPH-203ENST00000614659 MAP2K6P52564 334 aa13.41□□□□□ -0.26
SNPH-203ENST00000614659 TFF2Q03403 129 aa13.41□□□□□ -0.26
SNPH-203ENST00000614659 EIF4EBP2Q13542 120 aaPredicted RBP13.41□□□□□ -0.26
SNPH-203ENST00000614659 RAB31Q13636 194 aa13.41□□□□□ -0.26
SNPH-203ENST00000614659 JMJD6Q6NYC1 403 aaPredicted RBP13.41□□□□□ -0.26
SNPH-203ENST00000614659 TCTE3Q8IZS6 198 aa13.41□□□□□ -0.26
SNPH-203ENST00000614659 SMIM3Q9BZL3 60 aa13.41□□□□□ -0.26
SNPH-203ENST00000614659 SPNS1Q9H2V7 528 aa13.41□□□□□ -0.26
SNPH-203ENST00000614659 IL20Q9NYY1 176 aa13.41□□□□□ -0.26
SNPH-203ENST00000614659 PROCRQ9UNN8 238 aa13.41□□□□□ -0.26
SNPH-203ENST00000614659 BEX5Q5H9J7 111 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms