RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 RPS27P42677 84 aaKnown RBP13.2□□□□□ -0.3
CDH1-213ENST00000612417 RAD52P43351 418 aa13.2□□□□□ -0.3
CDH1-213ENST00000612417 RPL27P61353 136 aaKnown RBP13.2□□□□□ -0.3
CDH1-213ENST00000612417 ROM1Q03395 351 aa13.2□□□□□ -0.3
CDH1-213ENST00000612417 SLC17A1Q14916 467 aa13.2□□□□□ -0.3
CDH1-213ENST00000612417 C1QL3Q5VWW1 255 aa13.2□□□□□ -0.3
CDH1-213ENST00000612417 SLC25A25Q6KCM7 469 aa13.2□□□□□ -0.3
CDH1-213ENST00000612417 MARCH3Q86UD3 253 aa13.2□□□□□ -0.3
CDH1-213ENST00000612417 GLB1L2Q8IW92 636 aa13.2□□□□□ -0.3
CDH1-213ENST00000612417 ZNF679Q8IYX0 411 aa13.2□□□□□ -0.3
CDH1-213ENST00000612417 SLC38A6Q8IZM9 456 aa13.2□□□□□ -0.3
CDH1-213ENST00000612417 UXS1Q8NBZ7 420 aa13.2□□□□□ -0.3
CDH1-213ENST00000612417 GPN1Q9HCN4 374 aaPredicted RBP13.2□□□□□ -0.3
CDH1-213ENST00000612417 SLC17A5Q9NRA2 495 aa13.2□□□□□ -0.3
CDH1-213ENST00000612417 TAS2R8Q9NYW2 309 aa13.2□□□□□ -0.3
CDH1-213ENST00000612417 EIF3KQ9UBQ5 218 aaKnown RBP13.2□□□□□ -0.3
CDH1-213ENST00000612417 KCNN3Q9UGI6 736 aa13.2□□□□□ -0.3
CDH1-213ENST00000612417 CACNA1HO95180 2353 aa13.2□□□□□ -0.3
CDH1-213ENST00000612417 GGT3PA6NGU5 568 aa13.2□□□□□ -0.3
CDH1-213ENST00000612417 CREBL2O60519 120 aaPredicted RBP13.2□□□□□ -0.3
CDH1-213ENST00000612417 ALOX12BO75342 701 aa13.2□□□□□ -0.3
CDH1-213ENST00000612417 SLC25A12O75746 678 aa13.2□□□□□ -0.3
CDH1-213ENST00000612417 B3GALNT1O75752 331 aa13.2□□□□□ -0.3
CDH1-213ENST00000612417 SNAPC5O75971 98 aa13.2□□□□□ -0.3
CDH1-213ENST00000612417 DXOO77932 396 aaKnown RBP13.2□□□□□ -0.3
CDH1-213ENST00000612417 GPANK1O95872 356 aa13.2□□□□□ -0.3
CDH1-213ENST00000612417 ALDOBP05062 364 aa13.2□□□□□ -0.3
CDH1-213ENST00000612417 NR0B1P51843 470 aaKnown RBP13.2□□□□□ -0.3
CDH1-213ENST00000612417 PNLIPRP2P54317 469 aa13.2□□□□□ -0.3
CDH1-213ENST00000612417 EMP2P54851 167 aa13.2□□□□□ -0.3
CDH1-213ENST00000612417 LCN10Q6JVE6 187 aa13.2□□□□□ -0.3
CDH1-213ENST00000612417 ANKRD37Q7Z713 158 aa13.2□□□□□ -0.3
CDH1-213ENST00000612417 RNF128Q8TEB7 428 aa13.2□□□□□ -0.3
CDH1-213ENST00000612417 SEC22CQ9BRL7 303 aa13.2□□□□□ -0.3
CDH1-213ENST00000612417 TBL1XR1Q9BZK7 514 aa13.2□□□□□ -0.3
CDH1-213ENST00000612417 WWTR1Q9GZV5 400 aa13.2□□□□□ -0.3
CDH1-213ENST00000612417 TXNIPQ9H3M7 391 aa13.2□□□□□ -0.3
CDH1-213ENST00000612417 ELOVL3Q9HB03 270 aa13.2□□□□□ -0.3
CDH1-213ENST00000612417 PIPOXQ9P0Z9 390 aa13.2□□□□□ -0.3
CDH1-213ENST00000612417 EXPH5Q8NEV8 1989 aa13.19□□□□□ -0.3
CDH1-213ENST00000612417 IGLV1-36A0A0B4J1U3 117 aa13.19□□□□□ -0.3
CDH1-213ENST00000612417 RPS10-NUDT3A0A1W2PQS6 291 aa13.19□□□□□ -0.3
CDH1-213ENST00000612417 H0YC42 278 aa13.19□□□□□ -0.3
CDH1-213ENST00000612417 CTAG2O75638 210 aa13.19□□□□□ -0.3
CDH1-213ENST00000612417 RBBP9O75884 186 aa13.19□□□□□ -0.3
CDH1-213ENST00000612417 OR2A4O95047 310 aa13.19□□□□□ -0.3
CDH1-213ENST00000612417 ZNF28P17035 718 aa13.19□□□□□ -0.3
CDH1-213ENST00000612417 POLR2HP52434 150 aaKnown RBP13.19□□□□□ -0.3
CDH1-213ENST00000612417 MC2RQ01718 297 aa13.19□□□□□ -0.3
CDH1-213ENST00000612417 PUDPQ08623 228 aa13.19□□□□□ -0.3
CDH1-213ENST00000612417 PLCXD2Q0VAA5 305 aa13.19□□□□□ -0.3
CDH1-213ENST00000612417 PLA2G7Q13093 441 aa13.19□□□□□ -0.3
CDH1-213ENST00000612417 TOMM20Q15388 145 aa13.19□□□□□ -0.3
CDH1-213ENST00000612417 ACKR1Q16570 336 aa13.19□□□□□ -0.3
CDH1-213ENST00000612417 MEP1BQ16820 701 aa13.19□□□□□ -0.3
CDH1-213ENST00000612417 CLLU1Q5K131 121 aa13.19□□□□□ -0.3
CDH1-213ENST00000612417 ZNF385CQ66K41 422 aaPredicted RBP13.19□□□□□ -0.3
CDH1-213ENST00000612417 FAM166AQ6J272 317 aa13.19□□□□□ -0.3
CDH1-213ENST00000612417 SLC18B1Q6NT16 456 aa13.19□□□□□ -0.3
CDH1-213ENST00000612417 LRRC69Q6ZNQ3 347 aa13.19□□□□□ -0.3
CDH1-213ENST00000612417 CCDC28AQ8IWP9 274 aa13.19□□□□□ -0.3
CDH1-213ENST00000612417 ELMOD2Q8IZ81 293 aa13.19□□□□□ -0.3
CDH1-213ENST00000612417 OR8H3Q8N146 312 aa13.19□□□□□ -0.3
CDH1-213ENST00000612417 ZNF441Q8N8Z8 693 aa13.19□□□□□ -0.3
CDH1-213ENST00000612417 OR2A7Q96R45 310 aa13.19□□□□□ -0.3
CDH1-213ENST00000612417 CRB3Q9BUF7 120 aa13.19□□□□□ -0.3
CDH1-213ENST00000612417 C12orf4Q9NQ89 552 aa13.19□□□□□ -0.3
CDH1-213ENST00000612417 MRPL22Q9NWU5 206 aaKnown RBP13.19□□□□□ -0.3
CDH1-213ENST00000612417 SLC39A1Q9NY26 324 aa13.19□□□□□ -0.3
CDH1-213ENST00000612417 MGAT4CQ9UBM8 478 aa13.19□□□□□ -0.3
CDH1-213ENST00000612417 GPN3Q9UHW5 284 aaPredicted RBP13.19□□□□□ -0.3
CDH1-213ENST00000612417 FREM3P0C091 2139 aa13.19□□□□□ -0.3
CDH1-213ENST00000612417 OR6C76A6NM76 312 aa13.19□□□□□ -0.3
CDH1-213ENST00000612417 C11orf98E9PRG8 122 aa13.19□□□□□ -0.3
CDH1-213ENST00000612417 SLC17A2O00624 439 aa13.19□□□□□ -0.3
CDH1-213ENST00000612417 KLK3P07288 261 aaPredicted RBP13.19□□□□□ -0.3
CDH1-213ENST00000612417 CSF1P09603 554 aa13.19□□□□□ -0.3
CDH1-213ENST00000612417 AP2S1P53680 142 aaPredicted RBP13.19□□□□□ -0.3
CDH1-213ENST00000612417 RAP2BP61225 183 aa13.19□□□□□ -0.3
CDH1-213ENST00000612417 INSM1Q01101 510 aaPredicted RBP13.19□□□□□ -0.3
CDH1-213ENST00000612417 SSBP1Q04837 148 aaKnown RBP13.19□□□□□ -0.3
CDH1-213ENST00000612417 EXOSC2Q13868 293 aaKnown RBP13.19□□□□□ -0.3
CDH1-213ENST00000612417 RBMS2Q15434 407 aaKnown RBP13.19□□□□□ -0.3
CDH1-213ENST00000612417 FAAP20Q6NZ36 180 aa13.19□□□□□ -0.3
CDH1-213ENST00000612417 FTMTQ8N4E7 242 aa13.19□□□□□ -0.3
CDH1-213ENST00000612417 TSEN15Q8WW01 171 aaKnown RBP13.19□□□□□ -0.3
CDH1-213ENST00000612417 C8orf44Q96CB5 159 aa13.19□□□□□ -0.3
CDH1-213ENST00000612417 OMA1Q96E52 524 aa13.19□□□□□ -0.3
CDH1-213ENST00000612417 MESP1Q9BRJ9 268 aa13.19□□□□□ -0.3
CDH1-213ENST00000612417 DPCDQ9BVM2 203 aaPredicted RBP13.19□□□□□ -0.3
CDH1-213ENST00000612417 TMPRSS13Q9BYE2 586 aa13.19□□□□□ -0.3
CDH1-213ENST00000612417 ULBP3Q9BZM4 244 aa13.19□□□□□ -0.3
CDH1-213ENST00000612417 AKIRIN1Q9H9L7 192 aaPredicted RBP13.19□□□□□ -0.3
CDH1-213ENST00000612417 ING1Q9UK53 422 aaPredicted RBP13.19□□□□□ -0.3
CDH1-213ENST00000612417 TMED7-TICAM2A0A0A6YYA0 188 aa13.18□□□□□ -0.3
CDH1-213ENST00000612417 CIB4A0PJX0 185 aa13.18□□□□□ -0.3
CDH1-213ENST00000612417 OR2M5A3KFT3 312 aa13.18□□□□□ -0.3
CDH1-213ENST00000612417 ZSCAN5BA6NJL1 495 aa13.18□□□□□ -0.3
CDH1-213ENST00000612417 A8MVM7 634 aa13.18□□□□□ -0.3
CDH1-213ENST00000612417 CDX4O14627 284 aaPredicted RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms