RNA–Protein interactions for RNA: ENST00000608461.1

HDDC2-206, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-206ENST00000608461 PPOXP50336 477 aa12.33□□□□□ -0.44
HDDC2-206ENST00000608461 PSG4Q00888 419 aa12.33□□□□□ -0.44
HDDC2-206ENST00000608461 ENDOGQ14249 297 aaKnown RBP12.33□□□□□ -0.44
HDDC2-206ENST00000608461 KRT80Q6KB66 452 aa12.33□□□□□ -0.44
HDDC2-206ENST00000608461 SHQ1Q6PI26 577 aaKnown RBP12.33□□□□□ -0.44
HDDC2-206ENST00000608461 ARL9Q6T311 187 aa12.33□□□□□ -0.44
HDDC2-206ENST00000608461 C10orf67Q8IYJ2 551 aa12.33□□□□□ -0.44
HDDC2-206ENST00000608461 CPEB3Q8NE35 698 aaKnown RBP12.33□□□□□ -0.44
HDDC2-206ENST00000608461 WFDC11Q8NEX6 87 aa12.33□□□□□ -0.44
HDDC2-206ENST00000608461 OR4K13Q8NH42 304 aa12.33□□□□□ -0.44
HDDC2-206ENST00000608461 IPCEF1Q8WWN9 437 aaPredicted RBP12.33□□□□□ -0.44
HDDC2-206ENST00000608461 HTRA1Q92743 480 aa12.33□□□□□ -0.44
HDDC2-206ENST00000608461 TSSK6Q9BXA6 273 aa12.33□□□□□ -0.44
HDDC2-206ENST00000608461 OR2H1Q9GZK4 316 aa12.33□□□□□ -0.44
HDDC2-206ENST00000608461 EIF3KQ9UBQ5 218 aaKnown RBP12.33□□□□□ -0.44
HDDC2-206ENST00000608461 ATPIF1Q9UII2 106 aa12.33□□□□□ -0.44
HDDC2-206ENST00000608461 KLHL21Q9UJP4 597 aa12.33□□□□□ -0.44
HDDC2-206ENST00000608461 NDRG4Q9ULP0 352 aaKnown RBP12.33□□□□□ -0.44
HDDC2-206ENST00000608461 COA3Q9Y2R0 106 aaPredicted RBP12.33□□□□□ -0.44
HDDC2-206ENST00000608461 VPS13CQ709C8 3753 aa12.33□□□□□ -0.44
HDDC2-206ENST00000608461 IGLV1-36A0A0B4J1U3 117 aa12.32□□□□□ -0.44
HDDC2-206ENST00000608461 IFNGP01579 166 aa12.32□□□□□ -0.44
HDDC2-206ENST00000608461 TUBG1P23258 451 aa12.32□□□□□ -0.44
HDDC2-206ENST00000608461 CENPAP49450 140 aa12.32□□□□□ -0.44
HDDC2-206ENST00000608461 GDI2P50395 445 aaKnown RBP12.32□□□□□ -0.44
HDDC2-206ENST00000608461 UCP2P55851 309 aa12.32□□□□□ -0.44
HDDC2-206ENST00000608461 DSCR9P59020 149 aa12.32□□□□□ -0.44
HDDC2-206ENST00000608461 SELENOVP59797 346 aa12.32□□□□□ -0.44
HDDC2-206ENST00000608461 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.32□□□□□ -0.44
HDDC2-206ENST00000608461 SLC36A3Q495N2 470 aa12.32□□□□□ -0.44
HDDC2-206ENST00000608461 CLEC12AQ5QGZ9 265 aa12.32□□□□□ -0.44
HDDC2-206ENST00000608461 VHLLQ6RSH7 139 aa12.32□□□□□ -0.44
HDDC2-206ENST00000608461 OR6V1Q8N148 313 aa12.32□□□□□ -0.44
HDDC2-206ENST00000608461 NPEPL1Q8NDH3 523 aa12.32□□□□□ -0.44
HDDC2-206ENST00000608461 OR52E2Q8NGJ4 325 aa12.32□□□□□ -0.44
HDDC2-206ENST00000608461 OR2T4Q8NH00 348 aa12.32□□□□□ -0.44
HDDC2-206ENST00000608461 TEX47Q8TBZ9 253 aa12.32□□□□□ -0.44
HDDC2-206ENST00000608461 UTP4Q969X6 686 aaKnown RBP12.32□□□□□ -0.44
HDDC2-206ENST00000608461 MRPL24Q96A35 216 aaKnown RBP12.32□□□□□ -0.44
HDDC2-206ENST00000608461 POM121L2Q96KW2 1035 aa12.32□□□□□ -0.44
HDDC2-206ENST00000608461 DDOQ99489 341 aa12.32□□□□□ -0.44
HDDC2-206ENST00000608461 NIPSNAP1Q9BPW8 284 aa12.32□□□□□ -0.44
HDDC2-206ENST00000608461 PLA2G12AQ9BZM1 189 aa12.32□□□□□ -0.44
HDDC2-206ENST00000608461 TUBG2Q9NRH3 451 aa12.32□□□□□ -0.44
HDDC2-206ENST00000608461 KCNG2Q9UJ96 466 aa12.32□□□□□ -0.44
HDDC2-206ENST00000608461 AP4S1Q9Y587 144 aa12.32□□□□□ -0.44
HDDC2-206ENST00000608461 OR6C68A6NDL8 312 aa12.31□□□□□ -0.44
HDDC2-206ENST00000608461 TP53P04637 393 aaPredicted RBP12.31□□□□□ -0.44
HDDC2-206ENST00000608461 ERCC1P07992 297 aaPredicted RBP12.31□□□□□ -0.44
HDDC2-206ENST00000608461 FASP25445 335 aa12.31□□□□□ -0.44
HDDC2-206ENST00000608461 APEX1P27695 318 aaKnown RBP12.31□□□□□ -0.44
HDDC2-206ENST00000608461 EFNA4P52798 201 aa12.31□□□□□ -0.44
HDDC2-206ENST00000608461 BLVRAP53004 296 aa12.31□□□□□ -0.44
HDDC2-206ENST00000608461 ATP6AP1Q15904 470 aa12.31□□□□□ -0.44
HDDC2-206ENST00000608461 MOGQ16653 247 aa12.31□□□□□ -0.44
HDDC2-206ENST00000608461 ZNF362Q5T0B9 420 aaPredicted RBP12.31□□□□□ -0.44
HDDC2-206ENST00000608461 TMEM179BQ7Z7N9 219 aa12.31□□□□□ -0.44
HDDC2-206ENST00000608461 HIPK1Q86Z02 1210 aa12.31□□□□□ -0.44
HDDC2-206ENST00000608461 GJC3Q8NFK1 279 aa12.31□□□□□ -0.44
HDDC2-206ENST00000608461 OR8D4Q8NGM9 314 aa12.31□□□□□ -0.44
HDDC2-206ENST00000608461 DOK1Q99704 481 aa12.31□□□□□ -0.44
HDDC2-206ENST00000608461 TEX12Q9BXU0 123 aa12.31□□□□□ -0.44
HDDC2-206ENST00000608461 WNT5BQ9H1J7 359 aa12.31□□□□□ -0.44
HDDC2-206ENST00000608461 MS4A5Q9H3V2 200 aa12.31□□□□□ -0.44
HDDC2-206ENST00000608461 RERGLQ9H628 205 aa12.31□□□□□ -0.44
HDDC2-206ENST00000608461 ELOVL3Q9HB03 270 aa12.31□□□□□ -0.44
HDDC2-206ENST00000608461 NTN4Q9HB63 628 aa12.31□□□□□ -0.44
HDDC2-206ENST00000608461 SRA1Q9HD15 236 aaKnown RBP12.31□□□□□ -0.44
HDDC2-206ENST00000608461 RPRD1BQ9NQG5 326 aaKnown RBP12.31□□□□□ -0.44
HDDC2-206ENST00000608461 REV1Q9UBZ9 1251 aa12.31□□□□□ -0.44
HDDC2-206ENST00000608461 GPR160Q9UJ42 338 aa12.31□□□□□ -0.44
HDDC2-206ENST00000608461 USF3Q68DE3 2245 aa12.3□□□□□ -0.44
HDDC2-206ENST00000608461 TMEM129A0AVI4 362 aa12.3□□□□□ -0.44
HDDC2-206ENST00000608461 H3BN98 237 aa12.3□□□□□ -0.44
HDDC2-206ENST00000608461 H3BSA7 217 aa12.3□□□□□ -0.44
HDDC2-206ENST00000608461 J3QW42 95 aa12.3□□□□□ -0.44
HDDC2-206ENST00000608461 DCTN6O00399 190 aa12.3□□□□□ -0.44
HDDC2-206ENST00000608461 SGCEO43556 437 aa12.3□□□□□ -0.44
HDDC2-206ENST00000608461 SYNGR3O43761 229 aa12.3□□□□□ -0.44
HDDC2-206ENST00000608461 TIPRLO75663 272 aa12.3□□□□□ -0.44
HDDC2-206ENST00000608461 F12P00748 615 aaPredicted RBP12.3□□□□□ -0.44
HDDC2-206ENST00000608461 IGHV4-39P01824 125 aa12.3□□□□□ -0.44
HDDC2-206ENST00000608461 SCG5P05408 212 aa12.3□□□□□ -0.44
HDDC2-206ENST00000608461 CSF3P09919 207 aa12.3□□□□□ -0.44
HDDC2-206ENST00000608461 GAAP10253 952 aa12.3□□□□□ -0.44
HDDC2-206ENST00000608461 OSMP13725 252 aa12.3□□□□□ -0.44
HDDC2-206ENST00000608461 ZNF250P15622 560 aa12.3□□□□□ -0.44
HDDC2-206ENST00000608461 ZNF3P17036 446 aa12.3□□□□□ -0.44
HDDC2-206ENST00000608461 GRK5P34947 590 aa12.3□□□□□ -0.44
HDDC2-206ENST00000608461 SLC25A1P53007 311 aa12.3□□□□□ -0.44
HDDC2-206ENST00000608461 CLEC12BQ2HXU8 276 aa12.3□□□□□ -0.44
HDDC2-206ENST00000608461 SLC35F1Q5T1Q4 408 aa12.3□□□□□ -0.44
HDDC2-206ENST00000608461 RGS7BPQ6MZT1 257 aaPredicted RBP12.3□□□□□ -0.44
HDDC2-206ENST00000608461 SLC27A4Q6P1M0 643 aa12.3□□□□□ -0.44
HDDC2-206ENST00000608461 DNM1P46Q6ZS02 220 aa12.3□□□□□ -0.44
HDDC2-206ENST00000608461 SDR9C7Q8NEX9 313 aa12.3□□□□□ -0.44
HDDC2-206ENST00000608461 SLC26A10Q8NG04 563 aa12.3□□□□□ -0.44
HDDC2-206ENST00000608461 OR5K1Q8NHB7 308 aa12.3□□□□□ -0.44
HDDC2-206ENST00000608461 C11orf40Q8WZ69 217 aa12.3□□□□□ -0.44
HDDC2-206ENST00000608461 C18orf12Q96KH6 178 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms