RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 IGHV3-48P01763 117 aa3.81□□□□□ -1.8
LINC00397-202ENST00000606785 APOC1P02654 83 aa3.81□□□□□ -1.8
LINC00397-202ENST00000606785 STAG3L2P0CL84 134 aa3.81□□□□□ -1.8
LINC00397-202ENST00000606785 COX5BP10606 129 aa3.81□□□□□ -1.8
LINC00397-202ENST00000606785 ICAM2P13598 275 aa3.81□□□□□ -1.8
LINC00397-202ENST00000606785 CXCR2P25025 360 aa3.81□□□□□ -1.8
LINC00397-202ENST00000606785 STOMP27105 288 aa3.81□□□□□ -1.8
LINC00397-202ENST00000606785 GTF2E2P29084 291 aaKnown RBP3.81□□□□□ -1.8
LINC00397-202ENST00000606785 SERPINB1P30740 379 aa3.81□□□□□ -1.8
LINC00397-202ENST00000606785 CD79BP40259 229 aa3.81□□□□□ -1.8
LINC00397-202ENST00000606785 NAA10P41227 235 aaPredicted RBP3.81□□□□□ -1.8
LINC00397-202ENST00000606785 BTDP43251 543 aa3.81□□□□□ -1.8
LINC00397-202ENST00000606785 TFPI2P48307 235 aa3.81□□□□□ -1.8
LINC00397-202ENST00000606785 RFX3P48380 749 aa3.81□□□□□ -1.8
LINC00397-202ENST00000606785 CSNK1DP48730 415 aa3.81□□□□□ -1.8
LINC00397-202ENST00000606785 VEGFCP49767 419 aa3.81□□□□□ -1.8
LINC00397-202ENST00000606785 PRPS1P60891 318 aa3.81□□□□□ -1.8
LINC00397-202ENST00000606785 RAP1BP61224 184 aa3.81□□□□□ -1.8
LINC00397-202ENST00000606785 ERVK-25P63136 954 aa3.81□□□□□ -1.8
LINC00397-202ENST00000606785 PAX5Q02548 391 aa3.81□□□□□ -1.8
LINC00397-202ENST00000606785 EGFEM1PQ0D2K5 195 aa3.81□□□□□ -1.8
LINC00397-202ENST00000606785 SLAQ13239 276 aa3.81□□□□□ -1.8
LINC00397-202ENST00000606785 MARC1Q5VT66 337 aa3.81□□□□□ -1.8
LINC00397-202ENST00000606785 C22orf42Q6IC83 251 aa3.81□□□□□ -1.8
LINC00397-202ENST00000606785 ZNF530Q6P9A1 599 aaPredicted RBP3.81□□□□□ -1.8
LINC00397-202ENST00000606785 ZNF836Q6ZNA1 936 aa3.81□□□□□ -1.8
LINC00397-202ENST00000606785 PRSS41Q7RTY9 318 aa3.81□□□□□ -1.8
LINC00397-202ENST00000606785 ZNF571Q7Z3V5 609 aaPredicted RBP3.81□□□□□ -1.8
LINC00397-202ENST00000606785 BBS7Q8IWZ6 715 aa3.81□□□□□ -1.8
LINC00397-202ENST00000606785 MICU2Q8IYU8 434 aa3.81□□□□□ -1.8
LINC00397-202ENST00000606785 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.81□□□□□ -1.8
LINC00397-202ENST00000606785 OR10G3Q8NGC4 313 aa3.81□□□□□ -1.8
LINC00397-202ENST00000606785 OR6Q1Q8NGQ2 317 aa3.81□□□□□ -1.8
LINC00397-202ENST00000606785 KCTD4Q8WVF5 259 aa3.81□□□□□ -1.8
LINC00397-202ENST00000606785 NTAN1Q96AB6 310 aa3.81□□□□□ -1.8
LINC00397-202ENST00000606785 ZNF317Q96PQ6 595 aaPredicted RBP3.81□□□□□ -1.8
LINC00397-202ENST00000606785 CTRCQ99895 268 aa3.81□□□□□ -1.8
LINC00397-202ENST00000606785 C20orf85Q9H1P6 137 aa3.81□□□□□ -1.8
LINC00397-202ENST00000606785 OR52A5Q9H2C5 316 aa3.81□□□□□ -1.8
LINC00397-202ENST00000606785 RNF167Q9H6Y7 350 aa3.81□□□□□ -1.8
LINC00397-202ENST00000606785 GPATCH2LQ9NWQ4 482 aa3.81□□□□□ -1.8
LINC00397-202ENST00000606785 RBAKQ9NYW8 714 aaPredicted RBP3.81□□□□□ -1.8
LINC00397-202ENST00000606785 KCNIP1Q9NZI2 227 aa3.81□□□□□ -1.8
LINC00397-202ENST00000606785 CSAG2Q9Y5P2 127 aa3.81□□□□□ -1.8
LINC00397-202ENST00000606785 PLB1Q6P1J6 1458 aa3.8□□□□□ -1.8
LINC00397-202ENST00000606785 RRBP1Q9P2E9 1410 aaKnown RBP3.8□□□□□ -1.8
LINC00397-202ENST00000606785 PLEKHG1Q9ULL1 1385 aa3.8□□□□□ -1.8
LINC00397-202ENST00000606785 MAP3K15Q6ZN16 1313 aa3.8□□□□□ -1.8
LINC00397-202ENST00000606785 ZNF233A6NK53 670 aa3.8□□□□□ -1.8
LINC00397-202ENST00000606785 GABRR3A8MPY1 467 aa3.8□□□□□ -1.8
LINC00397-202ENST00000606785 E5RI56 91 aa3.8□□□□□ -1.8
LINC00397-202ENST00000606785 ATP6V1G2-DDX39BF2Z307 99 aa3.8□□□□□ -1.8
LINC00397-202ENST00000606785 H7C0C1 242 aa3.8□□□□□ -1.8
LINC00397-202ENST00000606785 ZNF701M0R085 212 aaPredicted RBP3.8□□□□□ -1.8
LINC00397-202ENST00000606785 CHST1O43916 411 aa3.8□□□□□ -1.8
LINC00397-202ENST00000606785 NDUFS6O75380 124 aaKnown RBP3.8□□□□□ -1.8
LINC00397-202ENST00000606785 DEXIO95424 95 aa3.8□□□□□ -1.8
LINC00397-202ENST00000606785 SNAP29O95721 258 aa3.8□□□□□ -1.8
LINC00397-202ENST00000606785 IGHV3-23P01764 117 aa3.8□□□□□ -1.8
LINC00397-202ENST00000606785 CD3GP09693 182 aa3.8□□□□□ -1.8
LINC00397-202ENST00000606785 PRPS1L1P21108 318 aa3.8□□□□□ -1.8
LINC00397-202ENST00000606785 GSTM3P21266 225 aa3.8□□□□□ -1.8
LINC00397-202ENST00000606785 SLC2A5P22732 501 aa3.8□□□□□ -1.8
LINC00397-202ENST00000606785 G0S2P27469 103 aa3.8□□□□□ -1.8
LINC00397-202ENST00000606785 CD40LGP29965 261 aa3.8□□□□□ -1.8
LINC00397-202ENST00000606785 LCN1P31025 176 aa3.8□□□□□ -1.8
LINC00397-202ENST00000606785 PHBP35232 272 aa3.8□□□□□ -1.8
LINC00397-202ENST00000606785 CDKN2CP42773 168 aa3.8□□□□□ -1.8
LINC00397-202ENST00000606785 UQCRFS1P47985 274 aa3.8□□□□□ -1.8
LINC00397-202ENST00000606785 MEOX2P50222 304 aa3.8□□□□□ -1.8
LINC00397-202ENST00000606785 CEBPGP53567 150 aa3.8□□□□□ -1.8
LINC00397-202ENST00000606785 LRRC63Q05C16 580 aa3.8□□□□□ -1.8
LINC00397-202ENST00000606785 ILKQ13418 452 aa3.8□□□□□ -1.8
LINC00397-202ENST00000606785 FLOT2Q14254 428 aa3.8□□□□□ -1.8
LINC00397-202ENST00000606785 C15orf32Q32M92 178 aa3.8□□□□□ -1.8
LINC00397-202ENST00000606785 HSDL1Q3SXM5 330 aa3.8□□□□□ -1.8
LINC00397-202ENST00000606785 HIKESHIQ53FT3 197 aa3.8□□□□□ -1.8
LINC00397-202ENST00000606785 AGBL2Q5U5Z8 902 aa3.8□□□□□ -1.8
LINC00397-202ENST00000606785 MLIPQ5VWP3 458 aa3.8□□□□□ -1.8
LINC00397-202ENST00000606785 SPOPLQ6IQ16 392 aa3.8□□□□□ -1.8
LINC00397-202ENST00000606785 REEP3Q6NUK4 255 aa3.8□□□□□ -1.8
LINC00397-202ENST00000606785 TFAP2EQ6VUC0 442 aa3.8□□□□□ -1.8
LINC00397-202ENST00000606785 CERS6Q6ZMG9 384 aa3.8□□□□□ -1.8
LINC00397-202ENST00000606785 COPS6Q7L5N1 327 aa3.8□□□□□ -1.8
LINC00397-202ENST00000606785 PAGE2Q7Z2X7 111 aa3.8□□□□□ -1.8
LINC00397-202ENST00000606785 FAM220AQ7Z4H9 259 aa3.8□□□□□ -1.8
LINC00397-202ENST00000606785 LINC00523Q86TU6 105 aa3.8□□□□□ -1.8
LINC00397-202ENST00000606785 ZNF546Q86UE3 836 aa3.8□□□□□ -1.8
LINC00397-202ENST00000606785 SLC13A5Q86YT5 568 aaPredicted RBP3.8□□□□□ -1.8
LINC00397-202ENST00000606785 MMAAQ8IVH4 418 aaKnown RBP3.8□□□□□ -1.8
LINC00397-202ENST00000606785 ENTHD1Q8IYW4 607 aa3.8□□□□□ -1.8
LINC00397-202ENST00000606785 C6orf223Q8N319 242 aa3.8□□□□□ -1.8
LINC00397-202ENST00000606785 TMEM252Q8N6L7 170 aa3.8□□□□□ -1.8
LINC00397-202ENST00000606785 ZNF525Q8N782 197 aa3.8□□□□□ -1.8
LINC00397-202ENST00000606785 OR1S2Q8NGQ3 325 aa3.8□□□□□ -1.8
LINC00397-202ENST00000606785 OR2G2Q8NGZ5 317 aa3.8□□□□□ -1.8
LINC00397-202ENST00000606785 NDNFQ8TB73 568 aa3.8□□□□□ -1.8
LINC00397-202ENST00000606785 ZNF596Q8TC21 504 aa3.8□□□□□ -1.8
LINC00397-202ENST00000606785 LRRC20Q8TCA0 184 aa3.8□□□□□ -1.8
LINC00397-202ENST00000606785 GLYATL2Q8WU03 294 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms