RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 PABPC1L2AQ5JQF8 200 aa13.95□□□□□ -0.18
LSM4-206ENST00000600289 KRT80Q6KB66 452 aa13.95□□□□□ -0.18
LSM4-206ENST00000600289 GLB1L2Q8IW92 636 aa13.95□□□□□ -0.18
LSM4-206ENST00000600289 CPEB3Q8NE35 698 aaKnown RBP13.95□□□□□ -0.18
LSM4-206ENST00000600289 OR52L1Q8NGH7 329 aa13.95□□□□□ -0.18
LSM4-206ENST00000600289 BDH2Q9BUT1 245 aa13.95□□□□□ -0.18
LSM4-206ENST00000600289 ZNF416Q9BWM5 594 aa13.95□□□□□ -0.18
LSM4-206ENST00000600289 NUAK2Q9H093 628 aa13.95□□□□□ -0.18
LSM4-206ENST00000600289 U3KQV3 271 aa13.95□□□□□ -0.18
LSM4-206ENST00000600289 IGLV1-36A0A0B4J1U3 117 aa13.94□□□□□ -0.18
LSM4-206ENST00000600289 FAM171A2A8MVW0 826 aa13.94□□□□□ -0.18
LSM4-206ENST00000600289 SLC16A7O60669 478 aa13.94□□□□□ -0.18
LSM4-206ENST00000600289 FKBP6O75344 327 aa13.94□□□□□ -0.18
LSM4-206ENST00000600289 COX5BP10606 129 aa13.94□□□□□ -0.18
LSM4-206ENST00000600289 HIST1H1CP16403 213 aaKnown RBP13.94□□□□□ -0.18
LSM4-206ENST00000600289 PSG4Q00888 419 aa13.94□□□□□ -0.18
LSM4-206ENST00000600289 HSF2Q03933 536 aa13.94□□□□□ -0.18
LSM4-206ENST00000600289 COX10Q12887 443 aa13.94□□□□□ -0.18
LSM4-206ENST00000600289 PPP1R8Q12972 351 aaKnown RBP13.94□□□□□ -0.18
LSM4-206ENST00000600289 VHLLQ6RSH7 139 aa13.94□□□□□ -0.18
LSM4-206ENST00000600289 ZBTB46Q86UZ6 589 aa13.94□□□□□ -0.18
LSM4-206ENST00000600289 OR10G2Q8NGC3 310 aa13.94□□□□□ -0.18
LSM4-206ENST00000600289 GIPC3Q8TF64 312 aa13.94□□□□□ -0.18
LSM4-206ENST00000600289 MRPL24Q96A35 216 aaKnown RBP13.94□□□□□ -0.18
LSM4-206ENST00000600289 SLCO4A1Q96BD0 722 aa13.94□□□□□ -0.18
LSM4-206ENST00000600289 COX4I2Q96KJ9 171 aa13.94□□□□□ -0.18
LSM4-206ENST00000600289 PLA2G12AQ9BZM1 189 aa13.94□□□□□ -0.18
LSM4-206ENST00000600289 OR2H1Q9GZK4 316 aa13.94□□□□□ -0.18
LSM4-206ENST00000600289 RACGAP1Q9H0H5 632 aa13.94□□□□□ -0.18
LSM4-206ENST00000600289 EGLN3Q9H6Z9 239 aa13.94□□□□□ -0.18
LSM4-206ENST00000600289 GDF2Q9UK05 429 aaPredicted RBP13.94□□□□□ -0.18
LSM4-206ENST00000600289 BAIAP2Q9UQB8 552 aa13.94□□□□□ -0.18
LSM4-206ENST00000600289 CMAHPQ9Y471 501 aa13.94□□□□□ -0.18
LSM4-206ENST00000600289 TIMM10BQ9Y5J6 103 aa13.94□□□□□ -0.18
LSM4-206ENST00000600289 CR1P17927 2039 aa13.93□□□□□ -0.18
LSM4-206ENST00000600289 TMEM129A0AVI4 362 aa13.93□□□□□ -0.18
LSM4-206ENST00000600289 INAFM1C9JVW0 142 aa13.93□□□□□ -0.18
LSM4-206ENST00000600289 NDUFS7O75251 213 aa13.93□□□□□ -0.18
LSM4-206ENST00000600289 RENP00797 406 aa13.93□□□□□ -0.18
LSM4-206ENST00000600289 TP53P04637 393 aaPredicted RBP13.93□□□□□ -0.18
LSM4-206ENST00000600289 SCG5P05408 212 aa13.93□□□□□ -0.18
LSM4-206ENST00000600289 GAAP10253 952 aa13.93□□□□□ -0.18
LSM4-206ENST00000600289 STOMP27105 288 aa13.93□□□□□ -0.18
LSM4-206ENST00000600289 APLNRP35414 380 aa13.93□□□□□ -0.18
LSM4-206ENST00000600289 CBX1P83916 185 aa13.93□□□□□ -0.18
LSM4-206ENST00000600289 SCRN3Q0VDG4 424 aa13.93□□□□□ -0.18
LSM4-206ENST00000600289 AQP6Q13520 282 aa13.93□□□□□ -0.18
LSM4-206ENST00000600289 CLEC12BQ2HXU8 276 aa13.93□□□□□ -0.18
LSM4-206ENST00000600289 LEG1Q6P5S2 330 aa13.93□□□□□ -0.18
LSM4-206ENST00000600289 ASRGL1Q7L266 308 aa13.93□□□□□ -0.18
LSM4-206ENST00000600289 JAZF1Q86VZ6 243 aa13.93□□□□□ -0.18
LSM4-206ENST00000600289 C1orf174Q8IYL3 243 aa13.93□□□□□ -0.18
LSM4-206ENST00000600289 ALDH16A1Q8IZ83 802 aa13.93□□□□□ -0.18
LSM4-206ENST00000600289 LNX2Q8N448 690 aa13.93□□□□□ -0.18
LSM4-206ENST00000600289 PAQR4Q8N4S7 273 aaPredicted RBP13.93□□□□□ -0.18
LSM4-206ENST00000600289 OR8D4Q8NGM9 314 aa13.93□□□□□ -0.18
LSM4-206ENST00000600289 DUS3LQ96G46 650 aaKnown RBP13.93□□□□□ -0.18
LSM4-206ENST00000600289 POM121L2Q96KW2 1035 aa13.93□□□□□ -0.18
LSM4-206ENST00000600289 NMNAT3Q96T66 252 aa13.93□□□□□ -0.18
LSM4-206ENST00000600289 DOK1Q99704 481 aa13.93□□□□□ -0.18
LSM4-206ENST00000600289 WNT5BQ9H1J7 359 aa13.93□□□□□ -0.18
LSM4-206ENST00000600289 CDH20Q9HBT6 801 aa13.93□□□□□ -0.18
LSM4-206ENST00000600289 DNAJB9Q9UBS3 223 aa13.93□□□□□ -0.18
LSM4-206ENST00000600289 COA3Q9Y2R0 106 aaPredicted RBP13.93□□□□□ -0.18
LSM4-206ENST00000600289 FKBP7Q9Y680 259 aa13.93□□□□□ -0.18
LSM4-206ENST00000600289 WIPF1O43516 503 aa13.92□□□□□ -0.18
LSM4-206ENST00000600289 GPRIN2O60269 458 aa13.92□□□□□ -0.18
LSM4-206ENST00000600289 APEX1P27695 318 aaKnown RBP13.92□□□□□ -0.18
LSM4-206ENST00000600289 NOS3P29474 1203 aa13.92□□□□□ -0.18
LSM4-206ENST00000600289 EFNA4P52798 201 aa13.92□□□□□ -0.18
LSM4-206ENST00000600289 DSCR9P59020 149 aa13.92□□□□□ -0.18
LSM4-206ENST00000600289 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.92□□□□□ -0.18
LSM4-206ENST00000600289 RAB35Q15286 201 aa13.92□□□□□ -0.18
LSM4-206ENST00000600289 MSMPQ1L6U9 139 aa13.92□□□□□ -0.18
LSM4-206ENST00000600289 UGT2A3Q6UWM9 527 aa13.92□□□□□ -0.18
LSM4-206ENST00000600289 TMEM179BQ7Z7N9 219 aa13.92□□□□□ -0.18
LSM4-206ENST00000600289 OR6V1Q8N148 313 aa13.92□□□□□ -0.18
LSM4-206ENST00000600289 NPEPL1Q8NDH3 523 aa13.92□□□□□ -0.18
LSM4-206ENST00000600289 OR4K13Q8NH42 304 aa13.92□□□□□ -0.18
LSM4-206ENST00000600289 NRBF2Q96F24 287 aa13.92□□□□□ -0.18
LSM4-206ENST00000600289 DDOQ99489 341 aa13.92□□□□□ -0.18
LSM4-206ENST00000600289 FEVQ99581 238 aa13.92□□□□□ -0.18
LSM4-206ENST00000600289 NIPSNAP1Q9BPW8 284 aa13.92□□□□□ -0.18
LSM4-206ENST00000600289 BCL2L14Q9BZR8 327 aa13.92□□□□□ -0.18
LSM4-206ENST00000600289 EMC7Q9NPA0 242 aa13.92□□□□□ -0.18
LSM4-206ENST00000600289 TBC1D23Q9NUY8 699 aa13.92□□□□□ -0.18
LSM4-206ENST00000600289 ATPIF1Q9UII2 106 aa13.92□□□□□ -0.18
LSM4-206ENST00000600289 NDRG4Q9ULP0 352 aaKnown RBP13.92□□□□□ -0.18
LSM4-206ENST00000600289 B9D1Q9UPM9 204 aa13.92□□□□□ -0.18
LSM4-206ENST00000600289 LOC100509620A0A075B734 347 aa13.91□□□□□ -0.18
LSM4-206ENST00000600289 OR6C68A6NDL8 312 aa13.91□□□□□ -0.18
LSM4-206ENST00000600289 DCTN6O00399 190 aa13.91□□□□□ -0.18
LSM4-206ENST00000600289 GNGT2O14610 69 aa13.91□□□□□ -0.18
LSM4-206ENST00000600289 F12P00748 615 aaPredicted RBP13.91□□□□□ -0.18
LSM4-206ENST00000600289 CSF3P09919 207 aa13.91□□□□□ -0.18
LSM4-206ENST00000600289 RAD52P43351 418 aa13.91□□□□□ -0.18
LSM4-206ENST00000600289 NUDT6P53370 316 aa13.91□□□□□ -0.18
LSM4-206ENST00000600289 UCP2P55851 309 aa13.91□□□□□ -0.18
LSM4-206ENST00000600289 CLEC12AQ5QGZ9 265 aa13.91□□□□□ -0.18
LSM4-206ENST00000600289 UNQ6126/PRO20091Q6UXV3 157 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms