RNA–Protein interactions for RNA: ENST00000593099.5

LIG3-216, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 4,664 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-216ENST00000593099 ORC5O43913 435 aa8.86□□□□□ -0.99
LIG3-216ENST00000593099 SPI1P17947 270 aa8.86□□□□□ -0.99
LIG3-216ENST00000593099 SHBQ15464 509 aa8.86□□□□□ -0.99
LIG3-216ENST00000593099 KRTCAP3Q53RY4 240 aa8.86□□□□□ -0.99
LIG3-216ENST00000593099 SPIN3Q5JUX0 258 aa8.86□□□□□ -0.99
LIG3-216ENST00000593099 TMEM205Q6UW68 189 aa8.86□□□□□ -0.99
LIG3-216ENST00000593099 DGAT2L6Q6ZPD8 337 aa8.86□□□□□ -0.99
LIG3-216ENST00000593099 VASH1Q7L8A9 365 aaPredicted RBP8.86□□□□□ -0.99
LIG3-216ENST00000593099 TRAPPC6BQ86SZ2 158 aa8.86□□□□□ -0.99
LIG3-216ENST00000593099 ZNF701Q9NV72 531 aaPredicted RBP8.86□□□□□ -0.99
LIG3-216ENST00000593099 TRAPPC2LH3BP13 241 aa8.86□□□□□ -0.99
LIG3-216ENST00000593099 SLC19A2O60779 497 aa8.86□□□□□ -0.99
LIG3-216ENST00000593099 MPIG6BO95866 241 aa8.86□□□□□ -0.99
LIG3-216ENST00000593099 IFI6P09912 130 aa8.86□□□□□ -0.99
LIG3-216ENST00000593099 C21orf33P30042 268 aaPredicted RBP8.86□□□□□ -0.99
LIG3-216ENST00000593099 ACSM5Q6NUN0 579 aa8.86□□□□□ -0.99
LIG3-216ENST00000593099 TMPRSS11FQ6ZWK6 438 aa8.86□□□□□ -0.99
LIG3-216ENST00000593099 GTF2H5Q6ZYL4 71 aa8.86□□□□□ -0.99
LIG3-216ENST00000593099 FAM83FQ8NEG4 500 aaPredicted RBP8.86□□□□□ -0.99
LIG3-216ENST00000593099 OR2M3Q8NG83 312 aa8.86□□□□□ -0.99
LIG3-216ENST00000593099 OR5T2Q8NGG2 359 aa8.86□□□□□ -0.99
LIG3-216ENST00000593099 ABHD4Q8TB40 342 aa8.86□□□□□ -0.99
LIG3-216ENST00000593099 FOXRED1Q96CU9 486 aaPredicted RBP8.86□□□□□ -0.99
LIG3-216ENST00000593099 HINT3Q9NQE9 182 aaKnown RBP8.86□□□□□ -0.99
LIG3-216ENST00000593099 GLTPQ9NZD2 209 aa8.86□□□□□ -0.99
LIG3-216ENST00000593099 REV1Q9UBZ9 1251 aa8.86□□□□□ -0.99
LIG3-216ENST00000593099 B3GNT3Q9Y2A9 372 aa8.86□□□□□ -0.99
LIG3-216ENST00000593099 DTX4Q9Y2E6 619 aa8.86□□□□□ -0.99
LIG3-216ENST00000593099 IMPA2O14732 288 aa8.86□□□□□ -0.99
LIG3-216ENST00000593099 GLSO94925 669 aaPredicted RBP8.86□□□□□ -0.99
LIG3-216ENST00000593099 SLC2A2P11168 524 aaPredicted RBP8.86□□□□□ -0.99
LIG3-216ENST00000593099 ACOT12Q8WYK0 555 aa8.86□□□□□ -0.99
LIG3-216ENST00000593099 KCNJ16Q9NPI9 418 aa8.86□□□□□ -0.99
LIG3-216ENST00000593099 ZNF226Q9NYT6 803 aa8.86□□□□□ -0.99
LIG3-216ENST00000593099 ENPP5Q9UJA9 477 aa8.86□□□□□ -0.99
LIG3-216ENST00000593099 SELENOFO60613 162 aa8.85□□□□□ -0.99
LIG3-216ENST00000593099 SELEP16581 610 aa8.85□□□□□ -0.99
LIG3-216ENST00000593099 ZNF26P17031 533 aaPredicted RBP8.85□□□□□ -0.99
LIG3-216ENST00000593099 GALEQ14376 348 aa8.85□□□□□ -0.99
LIG3-216ENST00000593099 TBCEQ15813 527 aaPredicted RBP8.85□□□□□ -0.99
LIG3-216ENST00000593099 ZAR1Q86SH2 424 aa8.85□□□□□ -0.99
LIG3-216ENST00000593099 TOMM5Q8N4H5 51 aa8.85□□□□□ -0.99
LIG3-216ENST00000593099 TNFAIP8L1Q8WVP5 186 aa8.85□□□□□ -0.99
LIG3-216ENST00000593099 FOXB1Q99853 325 aa8.85□□□□□ -0.99
LIG3-216ENST00000593099 TTTY12Q9BZ98 90 aa8.85□□□□□ -0.99
LIG3-216ENST00000593099 GABARAPL1Q9H0R8 117 aa8.85□□□□□ -0.99
LIG3-216ENST00000593099 TRAPPC4Q9Y296 219 aa8.85□□□□□ -0.99
LIG3-216ENST00000593099 CMAHPQ9Y471 501 aa8.85□□□□□ -0.99
LIG3-216ENST00000593099 TO15178 435 aa8.85□□□□□ -0.99
LIG3-216ENST00000593099 UBCP0CG48 685 aaKnown RBP8.85□□□□□ -0.99
LIG3-216ENST00000593099 B4GALT1P15291 398 aa8.85□□□□□ -0.99
LIG3-216ENST00000593099 ZNF182P17025 639 aaPredicted RBP8.85□□□□□ -0.99
LIG3-216ENST00000593099 ART1P52961 327 aa8.85□□□□□ -0.99
LIG3-216ENST00000593099 TMEM69Q5SWH9 247 aa8.85□□□□□ -0.99
LIG3-216ENST00000593099 OR2G6Q5TZ20 316 aa8.85□□□□□ -0.99
LIG3-216ENST00000593099 CD163Q86VB7 1156 aa8.85□□□□□ -0.99
LIG3-216ENST00000593099 ENTHD1Q8IYW4 607 aa8.85□□□□□ -0.99
LIG3-216ENST00000593099 NOXO1Q8NFA2 376 aa8.85□□□□□ -0.99
LIG3-216ENST00000593099 CCDC120Q96HB5 630 aa8.85□□□□□ -0.99
LIG3-216ENST00000593099 SLC25A19Q9HC21 320 aa8.85□□□□□ -0.99
LIG3-216ENST00000593099 DOCK8Q8NF50 2099 aa8.85□□□□□ -0.99
LIG3-216ENST00000593099 C4orf51C9J302 202 aa8.85□□□□□ -0.99
LIG3-216ENST00000593099 ZNF254O75437 659 aa8.85□□□□□ -0.99
LIG3-216ENST00000593099 DBHP09172 617 aa8.85□□□□□ -0.99
LIG3-216ENST00000593099 CRHBPP24387 322 aa8.85□□□□□ -0.99
LIG3-216ENST00000593099 S100PP25815 95 aa8.85□□□□□ -0.99
LIG3-216ENST00000593099 ERP29P30040 261 aaKnown RBP8.85□□□□□ -0.99
LIG3-216ENST00000593099 MLLT11Q13015 90 aaPredicted RBP8.85□□□□□ -0.99
LIG3-216ENST00000593099 GPR50Q13585 617 aa8.85□□□□□ -0.99
LIG3-216ENST00000593099 TRILQ7L0X0 811 aa8.85□□□□□ -0.99
LIG3-216ENST00000593099 FAM26EQ8N5C1 309 aa8.85□□□□□ -0.99
LIG3-216ENST00000593099 CLDN22Q8N7P3 220 aa8.85□□□□□ -0.99
LIG3-216ENST00000593099 OR52N5Q8NH56 324 aa8.85□□□□□ -0.99
LIG3-216ENST00000593099 CORO2AQ92828 525 aa8.85□□□□□ -0.99
LIG3-216ENST00000593099 VRK1Q99986 396 aaPredicted RBP8.85□□□□□ -0.99
LIG3-216ENST00000593099 ZNF416Q9BWM5 594 aa8.85□□□□□ -0.99
LIG3-216ENST00000593099 DNTTIP1Q9H147 329 aa8.85□□□□□ -0.99
LIG3-216ENST00000593099 FAIMQ9NVQ4 179 aa8.85□□□□□ -0.99
LIG3-216ENST00000593099 EXTL2Q9UBQ6 330 aa8.85□□□□□ -0.99
LIG3-216ENST00000593099 UBQLN2Q9UHD9 624 aa8.85□□□□□ -0.99
LIG3-216ENST00000593099 C9orf172C9J069 976 aa8.84□□□□□ -0.99
LIG3-216ENST00000593099 CLPXO76031 633 aa8.84□□□□□ -0.99
LIG3-216ENST00000593099 AGFG2O95081 481 aa8.84□□□□□ -0.99
LIG3-216ENST00000593099 NGFRP08138 427 aa8.84□□□□□ -0.99
LIG3-216ENST00000593099 OPRM1P35372 400 aa8.84□□□□□ -0.99
LIG3-216ENST00000593099 MAGEB1P43366 347 aa8.84□□□□□ -0.99
LIG3-216ENST00000593099 TOMM34Q15785 309 aaPredicted RBP8.84□□□□□ -0.99
LIG3-216ENST00000593099 CHRFAM7AQ494W8 412 aa8.84□□□□□ -0.99
LIG3-216ENST00000593099 ZNF782Q6ZMW2 699 aaPredicted RBP8.84□□□□□ -0.99
LIG3-216ENST00000593099 ARMC10Q8N2F6 343 aa8.84□□□□□ -0.99
LIG3-216ENST00000593099 CPEB3Q8NE35 698 aaKnown RBP8.84□□□□□ -0.99
LIG3-216ENST00000593099 FNDC9Q8TBE3 224 aa8.84□□□□□ -0.99
LIG3-216ENST00000593099 ASB5Q8WWX0 329 aa8.84□□□□□ -0.99
LIG3-216ENST00000593099 SLAMF6Q96DU3 332 aa8.84□□□□□ -0.99
LIG3-216ENST00000593099 C7orf34Q96L11 122 aa8.84□□□□□ -0.99
LIG3-216ENST00000593099 TP63Q9H3D4 680 aaPredicted RBP8.84□□□□□ -0.99
LIG3-216ENST00000593099 KCNN3Q9UGI6 736 aa8.84□□□□□ -0.99
LIG3-216ENST00000593099 OR52A1Q9UKL2 312 aa8.84□□□□□ -0.99
LIG3-216ENST00000593099 DIMT1Q9UNQ2 313 aaKnown RBP8.84□□□□□ -0.99
LIG3-216ENST00000593099 SLC5A6Q9Y289 635 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms