RNA–Protein interactions for RNA: ENST00000590118.5

CROCCP3-204, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 4 BASIC

Gene CROCCP3, Length 574 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-204ENST00000590118 ZNF607Q96SK3 696 aa11.68□□□□□ -0.54
CROCCP3-204ENST00000590118 RAD21L1Q9H4I0 556 aa11.68□□□□□ -0.54
CROCCP3-204ENST00000590118 ELOVL3Q9HB03 270 aa11.68□□□□□ -0.54
CROCCP3-204ENST00000590118 SLCO1B3Q9NPD5 702 aa11.68□□□□□ -0.54
CROCCP3-204ENST00000590118 UGT2A1Q9Y4X1 527 aa11.68□□□□□ -0.54
CROCCP3-204ENST00000590118 CENPBD1B2RD01 187 aa11.67□□□□□ -0.54
CROCCP3-204ENST00000590118 TNFRSF13BO14836 293 aaPredicted RBP11.67□□□□□ -0.54
CROCCP3-204ENST00000590118 SURF4O15260 269 aa11.67□□□□□ -0.54
CROCCP3-204ENST00000590118 BIRC5O15392 142 aa11.67□□□□□ -0.54
CROCCP3-204ENST00000590118 GPR137BO60478 399 aa11.67□□□□□ -0.54
CROCCP3-204ENST00000590118 TRMUO75648 421 aaKnown RBP11.67□□□□□ -0.54
CROCCP3-204ENST00000590118 ZNF205O95201 554 aa11.67□□□□□ -0.54
CROCCP3-204ENST00000590118 SLC2A10O95528 541 aa11.67□□□□□ -0.54
CROCCP3-204ENST00000590118 CSF1P09603 554 aa11.67□□□□□ -0.54
CROCCP3-204ENST00000590118 EPHA3P29320 983 aa11.67□□□□□ -0.54
CROCCP3-204ENST00000590118 ARHGDIAP52565 204 aa11.67□□□□□ -0.54
CROCCP3-204ENST00000590118 ERVK-25P63136 954 aa11.67□□□□□ -0.54
CROCCP3-204ENST00000590118 TAF11Q15544 211 aa11.67□□□□□ -0.54
CROCCP3-204ENST00000590118 TTMPQ5BVD1 217 aa11.67□□□□□ -0.54
CROCCP3-204ENST00000590118 SAMD5Q5TGI4 173 aa11.67□□□□□ -0.54
CROCCP3-204ENST00000590118 REEP3Q6NUK4 255 aa11.67□□□□□ -0.54
CROCCP3-204ENST00000590118 ZNF613Q6PF04 617 aa11.67□□□□□ -0.54
CROCCP3-204ENST00000590118 REC114Q7Z4M0 266 aa11.67□□□□□ -0.54
CROCCP3-204ENST00000590118 RANBP3LQ86VV4 465 aaPredicted RBP11.67□□□□□ -0.54
CROCCP3-204ENST00000590118 FITM2Q8N6M3 262 aa11.67□□□□□ -0.54
CROCCP3-204ENST00000590118 TBC1D15Q8TC07 691 aa11.67□□□□□ -0.54
CROCCP3-204ENST00000590118 OR2V2Q96R30 315 aa11.67□□□□□ -0.54
CROCCP3-204ENST00000590118 OR2H1Q9GZK4 316 aa11.67□□□□□ -0.54
CROCCP3-204ENST00000590118 WNT5BQ9H1J7 359 aa11.67□□□□□ -0.54
CROCCP3-204ENST00000590118 WDR55Q9H6Y2 383 aaPredicted RBP11.67□□□□□ -0.54
CROCCP3-204ENST00000590118 GCM1Q9NP62 436 aa11.67□□□□□ -0.54
CROCCP3-204ENST00000590118 MAN2C1Q9NTJ4 1040 aa11.67□□□□□ -0.54
CROCCP3-204ENST00000590118 ZNF229Q9UJW7 825 aa11.67□□□□□ -0.54
CROCCP3-204ENST00000590118 MCIDASD6RGH6 385 aa11.66□□□□□ -0.54
CROCCP3-204ENST00000590118 H0YL77 283 aa11.66□□□□□ -0.54
CROCCP3-204ENST00000590118 IFNL4K9M1U5 179 aa11.66□□□□□ -0.54
CROCCP3-204ENST00000590118 CHP2O43745 196 aa11.66□□□□□ -0.54
CROCCP3-204ENST00000590118 HIST1H2ABP04908 130 aa11.66□□□□□ -0.54
CROCCP3-204ENST00000590118 ASAH2BP0C7U1 165 aa11.66□□□□□ -0.54
CROCCP3-204ENST00000590118 IDO1P14902 403 aa11.66□□□□□ -0.54
CROCCP3-204ENST00000590118 ACADSP16219 412 aa11.66□□□□□ -0.54
CROCCP3-204ENST00000590118 KITLGP21583 273 aa11.66□□□□□ -0.54
CROCCP3-204ENST00000590118 CDK6Q00534 326 aa11.66□□□□□ -0.54
CROCCP3-204ENST00000590118 FAM189A2Q15884 450 aa11.66□□□□□ -0.54
CROCCP3-204ENST00000590118 SGCAQ16586 387 aa11.66□□□□□ -0.54
CROCCP3-204ENST00000590118 FAM27BQ5VT28 67 aa11.66□□□□□ -0.54
CROCCP3-204ENST00000590118 HIST3H2AQ7L7L0 130 aa11.66□□□□□ -0.54
CROCCP3-204ENST00000590118 ALDH16A1Q8IZ83 802 aa11.66□□□□□ -0.54
CROCCP3-204ENST00000590118 OR8B3Q8NGG8 313 aa11.66□□□□□ -0.54
CROCCP3-204ENST00000590118 VANGL1Q8TAA9 524 aaPredicted RBP11.66□□□□□ -0.54
CROCCP3-204ENST00000590118 ASB10Q8WXI3 467 aa11.66□□□□□ -0.54
CROCCP3-204ENST00000590118 GTF2H4Q92759 462 aa11.66□□□□□ -0.54
CROCCP3-204ENST00000590118 HIST1H2ACQ93077 130 aa11.66□□□□□ -0.54
CROCCP3-204ENST00000590118 OR8B2Q96RD0 313 aa11.66□□□□□ -0.54
CROCCP3-204ENST00000590118 MCHR1Q99705 422 aa11.66□□□□□ -0.54
CROCCP3-204ENST00000590118 TMEM246Q9BRR3 403 aa11.66□□□□□ -0.54
CROCCP3-204ENST00000590118 PAIP1Q9H074 479 aaKnown RBP11.66□□□□□ -0.54
CROCCP3-204ENST00000590118 EVA1AQ9H8M9 152 aa11.66□□□□□ -0.54
CROCCP3-204ENST00000590118 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.66□□□□□ -0.54
CROCCP3-204ENST00000590118 SLC13A4Q9UKG4 626 aa11.66□□□□□ -0.54
CROCCP3-204ENST00000590118 IGKV1D-43A0A0B4J1Z2 117 aa11.65□□□□□ -0.54
CROCCP3-204ENST00000590118 PRORSD1PA6NEY8 169 aa11.65□□□□□ -0.54
CROCCP3-204ENST00000590118 BLOC1S5-TXNDC5H3BN57 136 aa11.65□□□□□ -0.54
CROCCP3-204ENST00000590118 FMO6PO60774 539 aa11.65□□□□□ -0.54
CROCCP3-204ENST00000590118 F13BP05160 661 aa11.65□□□□□ -0.54
CROCCP3-204ENST00000590118 UMPSP11172 480 aa11.65□□□□□ -0.54
CROCCP3-204ENST00000590118 HOXB9P17482 250 aaPredicted RBP11.65□□□□□ -0.54
CROCCP3-204ENST00000590118 GSTM3P21266 225 aa11.65□□□□□ -0.54
CROCCP3-204ENST00000590118 PITPNBP48739 271 aa11.65□□□□□ -0.54
CROCCP3-204ENST00000590118 GCNT6Q5T4J0 391 aa11.65□□□□□ -0.54
CROCCP3-204ENST00000590118 TTC33Q6PID6 262 aaPredicted RBP11.65□□□□□ -0.54
CROCCP3-204ENST00000590118 Q6ZSV7 163 aa11.65□□□□□ -0.54
CROCCP3-204ENST00000590118 NANOGNBQ7Z5D8 188 aa11.65□□□□□ -0.54
CROCCP3-204ENST00000590118 C10orf111Q8N326 155 aa11.65□□□□□ -0.54
CROCCP3-204ENST00000590118 ZSCAN4Q8NAM6 433 aaPredicted RBP11.65□□□□□ -0.54
CROCCP3-204ENST00000590118 ZNF420Q8TAQ5 688 aaPredicted RBP11.65□□□□□ -0.54
CROCCP3-204ENST00000590118 C10orf82Q8WW14 230 aa11.65□□□□□ -0.54
CROCCP3-204ENST00000590118 NMD3Q96D46 503 aaKnown RBP11.65□□□□□ -0.54
CROCCP3-204ENST00000590118 PCGF1Q9BSM1 259 aa11.65□□□□□ -0.54
CROCCP3-204ENST00000590118 CDADC1Q9BWV3 514 aa11.65□□□□□ -0.54
CROCCP3-204ENST00000590118 POFUT1Q9H488 388 aa11.65□□□□□ -0.54
CROCCP3-204ENST00000590118 SMURF2Q9HAU4 748 aa11.65□□□□□ -0.54
CROCCP3-204ENST00000590118 ZIM2Q9NZV7 527 aa11.65□□□□□ -0.54
CROCCP3-204ENST00000590118 TIMM10BQ9Y5J6 103 aa11.65□□□□□ -0.54
CROCCP3-204ENST00000590118 RYR3Q15413 4870 aa11.64□□□□□ -0.55
CROCCP3-204ENST00000590118 CENPVL3A0A0U1RRI6 287 aa11.64□□□□□ -0.55
CROCCP3-204ENST00000590118 A0A1W2PRG6 482 aa11.64□□□□□ -0.55
CROCCP3-204ENST00000590118 KPNA4O00629 521 aaPredicted RBP11.64□□□□□ -0.55
CROCCP3-204ENST00000590118 LYPD3O95274 346 aa11.64□□□□□ -0.55
CROCCP3-204ENST00000590118 CYB5R3P00387 301 aaPredicted RBP11.64□□□□□ -0.55
CROCCP3-204ENST00000590118 THY1P04216 161 aa11.64□□□□□ -0.55
CROCCP3-204ENST00000590118 BGNP21810 368 aa11.64□□□□□ -0.55
CROCCP3-204ENST00000590118 TUBG1P23258 451 aa11.64□□□□□ -0.55
CROCCP3-204ENST00000590118 POLR2JP52435 117 aaKnown RBP11.64□□□□□ -0.55
CROCCP3-204ENST00000590118 UGT2B15P54855 530 aa11.64□□□□□ -0.55
CROCCP3-204ENST00000590118 FMODQ06828 376 aa11.64□□□□□ -0.55
CROCCP3-204ENST00000590118 RPL18Q07020 188 aaKnown RBP11.64□□□□□ -0.55
CROCCP3-204ENST00000590118 STX3Q13277 289 aa11.64□□□□□ -0.55
CROCCP3-204ENST00000590118 ZNF404Q494X3 552 aa11.64□□□□□ -0.55
CROCCP3-204ENST00000590118 WDR25Q64LD2 544 aaPredicted RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms