RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 C1QTNF12Q5T7M4 302 aa13.27□□□□□ -0.29
ATG4D-211ENST00000589753 LAIR2Q6ISS4 152 aa13.27□□□□□ -0.29
ATG4D-211ENST00000589753 TUBA1AQ71U36 451 aa13.27□□□□□ -0.29
ATG4D-211ENST00000589753 OR51G2Q8NGK0 314 aa13.27□□□□□ -0.29
ATG4D-211ENST00000589753 OR6N2Q8NGY6 317 aa13.27□□□□□ -0.29
ATG4D-211ENST00000589753 HSD17B8Q92506 261 aa13.27□□□□□ -0.29
ATG4D-211ENST00000589753 MUCL1Q96DR8 90 aa13.27□□□□□ -0.29
ATG4D-211ENST00000589753 FBXO17Q96EF6 278 aa13.27□□□□□ -0.29
ATG4D-211ENST00000589753 RNFT2Q96EX2 444 aa13.27□□□□□ -0.29
ATG4D-211ENST00000589753 WACQ9BTA9 647 aa13.27□□□□□ -0.29
ATG4D-211ENST00000589753 ADGRL4Q9HBW9 690 aa13.27□□□□□ -0.29
ATG4D-211ENST00000589753 AMBNQ9NP70 447 aa13.27□□□□□ -0.29
ATG4D-211ENST00000589753 CCNB1IP1Q9NPC3 277 aa13.27□□□□□ -0.29
ATG4D-211ENST00000589753 NPDC1Q9NQX5 325 aaPredicted RBP13.27□□□□□ -0.29
ATG4D-211ENST00000589753 ZNF224Q9NZL3 707 aa13.27□□□□□ -0.29
ATG4D-211ENST00000589753 LRRC42Q9Y546 428 aa13.27□□□□□ -0.29
ATG4D-211ENST00000589753 RELNP78509 3460 aa13.26□□□□□ -0.29
ATG4D-211ENST00000589753 ZNF503-AS2A6NEH8 195 aa13.26□□□□□ -0.29
ATG4D-211ENST00000589753 WNT11O96014 354 aa13.26□□□□□ -0.29
ATG4D-211ENST00000589753 SPARCP09486 303 aa13.26□□□□□ -0.29
ATG4D-211ENST00000589753 SBK2P0C263 348 aa13.26□□□□□ -0.29
ATG4D-211ENST00000589753 PATE4P0C8F1 98 aa13.26□□□□□ -0.29
ATG4D-211ENST00000589753 RPS27P42677 84 aaKnown RBP13.26□□□□□ -0.29
ATG4D-211ENST00000589753 PIGFQ07326 219 aa13.26□□□□□ -0.29
ATG4D-211ENST00000589753 PPA1Q15181 289 aa13.26□□□□□ -0.29
ATG4D-211ENST00000589753 TAB1Q15750 504 aa13.26□□□□□ -0.29
ATG4D-211ENST00000589753 PCK2Q16822 640 aa13.26□□□□□ -0.29
ATG4D-211ENST00000589753 GSG1Q2KHT4 349 aa13.26□□□□□ -0.29
ATG4D-211ENST00000589753 TEX30Q5JUR7 227 aa13.26□□□□□ -0.29
ATG4D-211ENST00000589753 C6orf141Q5SZD1 244 aa13.26□□□□□ -0.29
ATG4D-211ENST00000589753 TMEM53Q6P2H8 277 aa13.26□□□□□ -0.29
ATG4D-211ENST00000589753 SHFQ7M4L6 423 aa13.26□□□□□ -0.29
ATG4D-211ENST00000589753 SLC16A9Q7RTY1 509 aa13.26□□□□□ -0.29
ATG4D-211ENST00000589753 SYT9Q86SS6 491 aa13.26□□□□□ -0.29
ATG4D-211ENST00000589753 LINC00346Q8IVM7 164 aa13.26□□□□□ -0.29
ATG4D-211ENST00000589753 BPIFB6Q8NFQ5 453 aa13.26□□□□□ -0.29
ATG4D-211ENST00000589753 OR2AJ1Q8NGZ0 328 aa13.26□□□□□ -0.29
ATG4D-211ENST00000589753 FGFBP3Q8TAT2 258 aa13.26□□□□□ -0.29
ATG4D-211ENST00000589753 DIDO1Q9BTC0 2240 aaKnown RBP13.26□□□□□ -0.29
ATG4D-211ENST00000589753 RNF121Q9H920 327 aa13.26□□□□□ -0.29
ATG4D-211ENST00000589753 B3GNT2Q9NY97 397 aa13.26□□□□□ -0.29
ATG4D-211ENST00000589753 ASH2LQ9UBL3 628 aa13.26□□□□□ -0.29
ATG4D-211ENST00000589753 NDRG3Q9UGV2 375 aa13.26□□□□□ -0.29
ATG4D-211ENST00000589753 CYB5R1Q9UHQ9 305 aa13.26□□□□□ -0.29
ATG4D-211ENST00000589753 KLF2Q9Y5W3 355 aaPredicted RBP13.26□□□□□ -0.29
ATG4D-211ENST00000589753 SLC25A15Q9Y619 301 aa13.26□□□□□ -0.29
ATG4D-211ENST00000589753 LHFPL6Q9Y693 200 aa13.26□□□□□ -0.29
ATG4D-211ENST00000589753 PCNX1Q96RV3 2341 aa13.25□□□□□ -0.29
ATG4D-211ENST00000589753 UBR5O95071 2799 aaPredicted RBP13.25□□□□□ -0.29
ATG4D-211ENST00000589753 FAM20BO75063 409 aa13.25□□□□□ -0.29
ATG4D-211ENST00000589753 APOL3O95236 402 aa13.25□□□□□ -0.29
ATG4D-211ENST00000589753 MMP7P09237 267 aaPredicted RBP13.25□□□□□ -0.29
ATG4D-211ENST00000589753 PSKH1P11801 424 aa13.25□□□□□ -0.29
ATG4D-211ENST00000589753 ZNF32P17041 273 aa13.25□□□□□ -0.29
ATG4D-211ENST00000589753 PAX7P23759 505 aa13.25□□□□□ -0.29
ATG4D-211ENST00000589753 ARR3P36575 388 aa13.25□□□□□ -0.29
ATG4D-211ENST00000589753 PEX19P40855 299 aa13.25□□□□□ -0.29
ATG4D-211ENST00000589753 CXCR4P61073 352 aa13.25□□□□□ -0.29
ATG4D-211ENST00000589753 RAB1AP62820 205 aa13.25□□□□□ -0.29
ATG4D-211ENST00000589753 CSNK2BP67870 215 aa13.25□□□□□ -0.29
ATG4D-211ENST00000589753 SCRN3Q0VDG4 424 aa13.25□□□□□ -0.29
ATG4D-211ENST00000589753 SNTB1Q13884 538 aaKnown RBP13.25□□□□□ -0.29
ATG4D-211ENST00000589753 SLC18B1Q6NT16 456 aa13.25□□□□□ -0.29
ATG4D-211ENST00000589753 CORO6Q6QEF8 472 aa13.25□□□□□ -0.29
ATG4D-211ENST00000589753 SSX8Q7RTT4 187 aa13.25□□□□□ -0.29
ATG4D-211ENST00000589753 DPY19L4Q7Z388 723 aa13.25□□□□□ -0.29
ATG4D-211ENST00000589753 SLC35F2Q8IXU6 374 aa13.25□□□□□ -0.29
ATG4D-211ENST00000589753 GJC3Q8NFK1 279 aa13.25□□□□□ -0.29
ATG4D-211ENST00000589753 LGALS12Q96DT0 336 aa13.25□□□□□ -0.29
ATG4D-211ENST00000589753 WFIKKN1Q96NZ8 548 aa13.25□□□□□ -0.29
ATG4D-211ENST00000589753 MED18Q9BUE0 208 aa13.25□□□□□ -0.29
ATG4D-211ENST00000589753 YIPF3Q9GZM5 350 aa13.25□□□□□ -0.29
ATG4D-211ENST00000589753 PLCXD1Q9NUJ7 323 aa13.25□□□□□ -0.29
ATG4D-211ENST00000589753 UBAP1Q9NZ09 502 aa13.25□□□□□ -0.29
ATG4D-211ENST00000589753 GDF2Q9UK05 429 aaPredicted RBP13.25□□□□□ -0.29
ATG4D-211ENST00000589753 PCDHGB5Q9Y5G0 923 aa13.25□□□□□ -0.29
ATG4D-211ENST00000589753 TIMM10BQ9Y5J6 103 aa13.25□□□□□ -0.29
ATG4D-211ENST00000589753 HCFC1P51610 2035 aa13.24□□□□□ -0.29
ATG4D-211ENST00000589753 TUBAL3A6NHL2 446 aa13.24□□□□□ -0.29
ATG4D-211ENST00000589753 C19orf84I3L1E1 186 aa13.24□□□□□ -0.29
ATG4D-211ENST00000589753 SLC1A7O00341 560 aa13.24□□□□□ -0.29
ATG4D-211ENST00000589753 XPNPEP2O43895 674 aa13.24□□□□□ -0.29
ATG4D-211ENST00000589753 RAB36O95755 333 aa13.24□□□□□ -0.29
ATG4D-211ENST00000589753 SLC15A1P46059 708 aa13.24□□□□□ -0.29
ATG4D-211ENST00000589753 RAB40BQ12829 278 aa13.24□□□□□ -0.29
ATG4D-211ENST00000589753 EIF2B1Q14232 305 aaKnown RBP13.24□□□□□ -0.29
ATG4D-211ENST00000589753 KLHL22Q53GT1 634 aa13.24□□□□□ -0.29
ATG4D-211ENST00000589753 ALKBH2Q6NS38 261 aa13.24□□□□□ -0.29
ATG4D-211ENST00000589753 C22orf34Q6ZV56 151 aa13.24□□□□□ -0.29
ATG4D-211ENST00000589753 DCXRQ7Z4W1 244 aa13.24□□□□□ -0.29
ATG4D-211ENST00000589753 MDP1Q86V88 176 aa13.24□□□□□ -0.29
ATG4D-211ENST00000589753 CDC20BQ86Y33 519 aa13.24□□□□□ -0.29
ATG4D-211ENST00000589753 ZNF786Q8N393 782 aa13.24□□□□□ -0.29
ATG4D-211ENST00000589753 ZNF454Q8N9F8 522 aa13.24□□□□□ -0.29
ATG4D-211ENST00000589753 OR4F15Q8NGB8 312 aa13.24□□□□□ -0.29
ATG4D-211ENST00000589753 OTOSQ8NHW6 89 aa13.24□□□□□ -0.29
ATG4D-211ENST00000589753 LINC01560Q8TB33 94 aa13.24□□□□□ -0.29
ATG4D-211ENST00000589753 SMAP2Q8WU79 429 aaPredicted RBP13.24□□□□□ -0.29
ATG4D-211ENST00000589753 ZC3HAV1LQ96H79 300 aaKnown RBP13.24□□□□□ -0.29
ATG4D-211ENST00000589753 MNTQ99583 582 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms